Factsheet for VIT_03s0063g02440.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 4
plasma membrane 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra034626.1-P	Field mustard	cytosol, nucleus, plastid	63.12	68.81
Bra037558.1-P	Field mustard	cytosol	47.52	68.6
GSMUA_Achr7P26790_001	Banana	plastid	65.48	63.53
VIT_04s0023g01570.t01	Wine grape	nucleus	67.85	63.5
Bra022359.1-P	Field mustard	plasma membrane	66.9	58.96
CDX92276	Canola	plasma membrane	66.9	58.96
VIT_14s0083g00330.t01	Wine grape	plasma membrane	56.03	54.36
VIT_09s0002g04210.t01	Wine grape	plastid	63.59	48.82
KXG39820	Sorghum	plastid	65.72	48.6
GSMUA_Achr5P02090_001	Banana	nucleus	67.38	48.47
VIT_11s0016g03880.t01	Wine grape	plastid	74.23	48.31
Zm00001d028337_P003	Maize	nucleus	65.72	47.68
HORVU2Hr1G061030.8	Barley	plastid	59.81	47.47
Zm00001d030218_P003	Maize	plastid	62.41	47.4
GSMUA_Achr7P00830_001	Banana	plastid	68.56	47.23
GSMUA_Achr4P10790_001	Banana	plastid	70.69	46.94
EER91832	Sorghum	plastid	61.7	46.86
VIT_01s0127g00890.t01	Wine grape	mitochondrion	28.84	46.04
HORVU0Hr1G013830.4	Barley	plastid	60.99	45.58
GSMUA_Achr4P32080_001	Banana	plastid	66.19	45.45
Os10t0104800-01	Rice	plastid	60.76	45.25
EER97954	Sorghum	plastid	60.99	45.1
GSMUA_Achr4P03200_001	Banana	mitochondrion, plasma membrane	71.87	44.77
EER90803	Sorghum	plastid	63.36	44.44
Os07t0137800-00	Rice	plasma membrane	56.5	44.42
TraesCS5A01G411300.1	Wheat	plastid	60.05	44.33
KRH60853	Soybean	cytosol, plastid	67.14	44.03
Zm00001d034257_P002	Maize	plastid	60.76	43.86
TraesCS4B01G233600.1	Wheat	nucleus, plastid	63.36	43.37
CDX99312	Canola	nucleus, plastid	67.14	43.36
Solyc10g051330.1.1	Tomato	nucleus	61.47	43.33
CDX95494	Canola	nucleus, plastid	69.27	42.71
TraesCS4A01G077500.1	Wheat	nucleus	62.65	42.67
CDY18547	Canola	nucleus, plastid	68.79	42.48
Bra018782.1-P	Field mustard	plastid	67.85	42.27
CDY48859	Canola	nucleus, plastid	68.09	42.04
CDY48084	Canola	nucleus, plastid	68.09	41.98
AT3G18810.1	Thale cress	nucleus, plastid	69.03	41.71
Zm00001d007848_P001	Maize	mitochondrion, plastid	59.57	41.45
TraesCS5B01G415000.1	Wheat	plastid	60.05	41.44
AT1G49270.1	Thale cress	cytosol, plastid	68.32	41.34
CDY61983	Canola	cytosol, plastid	67.85	41.18
Bra001723.1-P	Field mustard	cytosol, plastid	67.85	41.0
CDX76282	Canola	nucleus, plastid	63.83	40.85
PGSC0003DMT400001868	Potato	nucleus, plastid	65.72	40.76
CDY46249	Canola	nucleus, plastid	63.59	40.51
AT4G34440.1	Thale cress	plastid	64.07	40.45
PGSC0003DMT400062758	Potato	nucleus	68.32	40.36
CDX75434	Canola	nucleus, plastid	64.07	40.33
Bra011534.1-P	Field mustard	nucleus, plastid	64.07	40.33
CDX82325	Canola	cytosol, plastid	67.85	40.25
Solyc01g109530.2.1	Tomato	nucleus	66.19	40.11
Solyc11g044460.1.1	Tomato	nucleus	68.32	39.48
CDX69059	Canola	endoplasmic reticulum, plasma membrane	63.59	37.68
VIT_01s0127g00670.t01	Wine grape	plastid	56.03	35.27
HORVU4Hr1G065270.7	Barley	cytosol	39.95	34.35
VIT_13s0067g01620.t01	Wine grape	cytosol, plastid	30.02	32.4
VIT_01s0011g02460.t01	Wine grape	plastid	53.66	31.27
VIT_09s0002g02420.t01	Wine grape	cytosol	41.37	23.43
VIT_11s0016g02430.t01	Wine grape	plasma membrane	38.3	21.51
VIT_18s0001g11590.t01	Wine grape	cytosol	35.93	21.02
VIT_18s0001g14990.t01	Wine grape	cytosol, nucleus, peroxisome	31.21	16.88

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100855412	wikigene:100855412	MapMan:18.4.1.22	Gene3D:3.30.200.20	ProteinID:CCB56976
ProteinID:CCB56976.1	UniProt:F6HQL9	EMBL:FN596006	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	EntrezGene:LOC100855412	wikigene:LOC100855412	PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF285	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000210802E	ArrayExpress:VIT_03s0063g02440
EnsemblPlantsGene:VIT_03s0063g02440	EnsemblPlants:VIT_03s0063g02440.t01	RefSeq:XP_003631608	RefSeq:XP_003631608.1	SEG:seg	:

Description

No Description!

Coordinates

chr3:+:5671204..5673586

Molecular Weight (calculated)

46437.0 Da

IEP (calculated)

6.846

GRAVY (calculated)

-0.429

Length

423 amino acids

Sequence
(BLAST)

001: MGVQHGVGWP SPPPPPPNMM SGEMSSSNFS GPFQPPLPPP HPSLALGFSK STFNYDELAV ATAGFSQANL LGQGGFGYVH KGVLPNGKEI AVKSLKAGSG
101: QGEREFQAEV EIISRVHHRH LVSLVGYCIA GSQRMLVYEF VPNNTLEYHL HGKGRPTMEW STRLKIAMGS AKGLAYLHED CHPRIIHRDI KTANILLDFN
201: FEAKVADFGL AKLSSDTNTH VSTRIMGTFG YLAPEYASSG KLTEKSDVFS FGVMLLELIT GKRPVESDME DSLVDWARPI LLRALEDGNY EELVDPRLEK
301: NYKPQEMVRL IACAAACIRH SARRRPKMSQ TVRALEGDVS LDDLNEGVKP GQSSVFGSDG STDYDKGSYN ADMKKFRRMA LSSQDYESST EYGFTSDYGN
401: NEASSSASGD SLELGQRRAS RRI

Best Arabidopsis Sequence Match ( AT2G18470.1 )
(BLAST)

001: MASSPESAPP TNSTSSPSPP SNTNSTTSSP PAPSPPSPTP PQGDSSSSPP PDSTSPPAPQ APNPPNSSNN SPSPPSQGGG GERGNGGNNG GNDTPPSRGS
101: PPSPPSRSNG DNGGSRSSPP GDTGGSRSDN PPSSGGSSGG GGGGRSNTNT AIIVGVLVGA GLLMIVLIIV CLRRKKKRKD SFYPEPMKGN QYQYYGNNNN
201: NNASQNYPNW HLNSQGQNQQ STGGWGGGGP SPPPPPRMPT SGEDSSMYSG PSRPVLPPPS PALALGFNKS TFTYQELAAA TGGFTDANLL GQGGFGYVHK
301: GVLPSGKEVA VKSLKAGSGQ GEREFQAEVD IISRVHHRYL VSLVGYCIAD GQRMLVYEFV PNKTLEYHLH GKNLPVMEFS TRLRIALGAA KGLAYLHEDC
401: HPRIIHRDIK SANILLDFNF DAMVADFGLA KLTSDNNTHV STRVMGTFGY LAPEYASSGK LTEKSDVFSY GVMLLELITG KRPVDNSITM DDTLVDWARP
501: LMARALEDGN FNELADARLE GNYNPQEMAR MVTCAAASIR HSGRKRPKMS QIVRALEGEV SLDALNEGVK PGHSNVYGSL GASSDYSQTS YNADMKKFRQ
601: IALSSQEFPV SDCEGTSSND SRDMGTKSPT PPK

Arabidopsis Description

PERK4Proline-rich receptor-like protein kinase PERK4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZNQ8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.