CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra018782.1-P	Field mustard	plastid	96.79	97.79
CDY48859	Canola	nucleus, plastid	97.38	97.52
AT1G49270.1	Thale cress	cytosol, plastid	85.86	84.26
CDX92276	Canola	plasma membrane	55.39	79.17
CDX95494	Canola	nucleus, plastid	69.53	69.53
CDY18547	Canola	nucleus, plastid	69.39	69.49
VIT_03s0063g02440.t01	Wine grape	plastid	41.98	68.09
CDY61983	Canola	cytosol, plastid	68.8	67.72
CDX99312	Canola	nucleus, plastid	64.43	67.48
CDX82325	Canola	cytosol, plastid	68.95	66.34
GSMUA_Achr7P26790_001	Banana	plastid	39.5	62.16
CDX75275	Canola	cytosol	31.05	60.51
GSMUA_Achr5P02090_001	Banana	nucleus	49.42	57.65
CDX75434	Canola	nucleus, plastid	56.12	57.29
CDX76282	Canola	nucleus, plastid	53.79	55.82
GSMUA_Achr4P10790_001	Banana	plastid	51.6	55.57
CDY46249	Canola	nucleus, plastid	53.64	55.42
KRH60853	Soybean	cytosol, plastid	51.75	55.04
GSMUA_Achr7P00830_001	Banana	plastid	49.13	54.89
KXG39820	Sorghum	plastid	45.34	54.37
Zm00001d030218_P003	Maize	plastid	43.73	53.86
CDY65603	Canola	plastid	48.4	53.72
Zm00001d028337_P003	Maize	nucleus	45.63	53.69
GSMUA_Achr4P32080_001	Banana	plastid	47.81	53.25
EER91832	Sorghum	plastid	43.15	53.14
CDY71995	Canola	nucleus, plastid	32.94	52.8
CDX69059	Canola	endoplasmic reticulum, plasma membrane	54.66	52.52
GSMUA_Achr4P03200_001	Banana	mitochondrion, plasma membrane	51.9	52.43
CDY59546	Canola	plastid	32.94	51.83
CDY39543	Canola	plastid	48.54	51.31
CDY02546	Canola	plastid	38.34	51.27
CDX77417	Canola	plastid	48.54	51.23
HORVU0Hr1G013830.4	Barley	plastid	42.13	51.06
CDY47531	Canola	plastid	38.34	50.87
HORVU2Hr1G061030.8	Barley	plastid	39.5	50.84
EER90803	Sorghum	plastid	44.61	50.75
Zm00001d034257_P002	Maize	plastid	43.15	50.51
Os10t0104800-01	Rice	plastid	41.69	50.35
TraesCS4B01G233600.1	Wheat	nucleus, plastid	45.34	50.32
TraesCS4A01G077500.1	Wheat	nucleus	45.48	50.24
TraesCS5A01G411300.1	Wheat	plastid	41.55	49.74
Os07t0137800-00	Rice	plasma membrane	37.9	48.33
EER97954	Sorghum	plastid	39.36	47.2
Solyc10g051330.1.1	Tomato	nucleus	40.82	46.67
TraesCS5B01G415000.1	Wheat	plastid	41.25	46.17
PGSC0003DMT400062758	Potato	nucleus	47.67	45.67
Zm00001d007848_P001	Maize	mitochondrion, plastid	40.23	45.39
CDY48706	Canola	cytosol	34.55	44.89
PGSC0003DMT400001868	Potato	nucleus, plastid	44.61	44.87
Solyc11g044460.1.1	Tomato	nucleus	47.52	44.54
Solyc01g109530.2.1	Tomato	nucleus	44.46	43.7
CDY03749	Canola	plastid	39.36	40.18
CDY41442	Canola	plastid	38.48	40.06
CDX91719	Canola	plastid	38.34	39.02
CDY01653	Canola	plastid	37.32	38.97
CDY09439	Canola	plastid	38.63	38.8
CDX74517	Canola	plastid	37.46	38.7
CDX68882	Canola	plastid	39.36	38.41
CDY59350	Canola	plastid	35.71	36.95
CDY44156	Canola	nucleus	38.34	36.94
CDY66134	Canola	nucleus	49.42	36.85
CDY04245	Canola	plastid	36.15	36.52
CDY51224	Canola	plastid	50.0	36.26
CDY07370	Canola	plastid	35.13	36.19
CDY11592	Canola	plastid	38.63	36.05
CDX93398	Canola	cytosol	37.03	35.52
CDY51639	Canola	nucleus	36.3	35.47
CDY20960	Canola	cytosol	37.32	35.16
CDY37963	Canola	cytosol	36.88	35.09
CDY47133	Canola	cytosol, plastid	38.34	34.97
HORVU4Hr1G065270.7	Barley	cytosol	24.93	34.76
CDY20615	Canola	cytosol	36.73	34.66
CDX95997	Canola	plastid	35.42	33.11
CDY16146	Canola	plastid	37.61	30.82
CDY46900	Canola	plasma membrane	32.22	29.91
CDY10586	Canola	cytosol, nucleus, plasma membrane	25.07	28.48
CDY38610	Canola	plastid	36.15	28.15
CDY02454	Canola	cytosol, nucleus, plasma membrane	24.78	28.15
CDX75728	Canola	cytosol	24.34	27.83
CDX82522	Canola	cytosol	25.51	26.64
CDY20711	Canola	cytosol, plasma membrane, plastid	24.49	25.38
CDY32758	Canola	plasma membrane	24.34	25.11
CDY23630	Canola	cytosol	26.53	24.56
CDY55134	Canola	cytosol	26.68	24.34
CDX97507	Canola	cytosol, mitochondrion, nucleus	26.38	24.23
CDY51732	Canola	cytosol	26.53	24.2
CDY32884	Canola	plasma membrane	20.85	23.14
CDY32921	Canola	plasma membrane	22.59	20.67
CDY32757	Canola	plasma membrane	18.22	17.63
CDY48704	Canola	cytosol, mitochondrion, plasma membrane, plastid	9.62	17.01

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.22	Gene3D:3.30.200.20	GO:A0A078IFK0	UniProt:A0A078IFK0	EnsemblPlants:CDY48084
ProteinID:CDY48084	ProteinID:CDY48084.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00088771001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF07714	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF285
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
TMHMM:TMhelix	UniParc:UPI0004EBC1F5	SEG:seg	:	:	:

Description

BnaC06g02480DBnaC06g02480D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IFK0]

Coordinates

chrLK032753:-:26093..29289

Molecular Weight (calculated)

72734.5 Da

IEP (calculated)

6.036

GRAVY (calculated)

-0.661

Length

686 amino acids

Sequence
(BLAST)

001: MAEGQSPENS PPAPPPPSPS SPSSNDQITS PPPTSGSQTT PPPPSPTLAP PPEQQEQSPP PPENSSSPPP TPYESSIPSS QSQSPPPPSQ SPPQQSDNKG
101: NNQGNDGSGN GGGNNASPPP PPSKTSEHSS HSPPKSLAPP TSNGGSNSSS NDRPNMGVVI GLVAAAGLLF LVMILLCVCC LRKKKKKSKI EQMPYYGSNA
201: FAPGKNGGDQ YFNNAATQQQ QHYNQNDNTA NLPPPPGTMG TNWVNSPPPP PPGNWQPMPS PPAPVSGGAN AIHSNEMSSN YSSGPYAPSL PPPHPSVALG
301: FNKSTFTYEE LAAATQGFSK DHLLGQGGFG YVHKGVLPNG KEIAVKSLKA GSGQGDREFQ AEVDIISRVH HRHLVSLVGY CSNSGGQRLL VYEFLPNDTL
401: EFHLHGKTGT VMDWPTRLKI ALGSAKGLAY LHEDCHPKII HRDIKASNIL LDLNFEAKVA DFGLAKLSQD NNTHVSTRVM GTFGYLAPEY AASGKLTDKS
501: DVFSFGVMLL ELITGRRPVD LSGDMEDSLV DWARPLCMDA VHDGEYGELV DPFLENQYEP YEMARMVACA AAAVRHSGRR RPKMSQIVRI LEGDASLDDL
601: NDGVKPGQGS YMGSSGGDGS SDYETGTYGA EMKKFRKVTL DSRDYAASSE YGGTSEYGLD PSSSSSEEMN IGGGSNKTTT TSTRRV

Best Arabidopsis Sequence Match ( AT1G49270.1 )
(BLAST)

001: MAEGQSPENS PPAPPPPSPP SPPSSNDQQT TSPPPSDNQE TTSPPPPSSP DIAPPPQQQQ ESPPPPLPEN SSDGSSSSSP PPPSDSSSQS QSPPPPSTSP
101: PQQSDNNGNK GNNNENNKGN DGSSGDGGNK NMSHTPPPPS KTSDHSSHSQ PRSLAPPTSN SGSNSSSNDG LNIGAVIGLV AAAGILFIVM ILLCVCCFRK
201: KKKKSKLDQM PYYGSNAYPA GKTGGDQYYN QNAATQQQQH YNQNDHIVNL PPPPGSMGTN WVSSPPPPPP GNWQPMPSPP APVSGGANVI QSGEMSSNFS
301: SGPYAPSLPP PHPSVALGFN NSTFTYEELA SATQGFSKDR LLGQGGFGYV HKGILPNGKE IAVKSLKAGS GQGEREFQAE VEIISRVHHR HLVSLVGYCS
401: NAGGQRLLVY EFLPNDTLEF HLHGKSGTVM DWPTRLKIAL GSAKGLAYLH EDCHPKIIHR DIKASNILLD HNFEAKVADF GLAKLSQDNN THVSTRVMGT
501: FGYLAPEYAS SGKLTEKSDV FSFGVMLLEL ITGRGPVDLS GDMEDSLVDW ARPLCMRVAQ DGEYGELVDP FLEHQYEPYE MARMVACAAA AVRHSGRRRP
601: KMSQIVRTLE GDASLDDLDD GVKPKQSSSG GEGSSDYEMG TYGAEMRKFR KVTLESRDYG ASSEYGATSE YGLDPSSSSS EEMHIGGSTS KTTTTNRGI

Arabidopsis Description

PERK7Proline-rich receptor-like protein kinase PERK7 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI96]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.