Factsheet for TraesCS5A01G411300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G013830.4	Barley	plastid	89.88	90.99
TraesCS5B01G415000.1	Wheat	plastid	92.15	86.13
EER90803	Sorghum	plastid	71.2	67.66
Zm00001d034257_P002	Maize	plastid	68.06	66.55
Bra034626.1-P	Field mustard	cytosol, nucleus, plastid	41.88	61.86
VIT_03s0063g02440.t01	Wine grape	plastid	44.33	60.05
VIT_04s0023g01570.t01	Wine grape	nucleus	46.95	59.51
Bra037558.1-P	Field mustard	cytosol	30.37	59.39
GSMUA_Achr5P02090_001	Banana	nucleus	57.77	56.29
Bra022359.1-P	Field mustard	plasma membrane	46.6	55.62
CDX92276	Canola	plasma membrane	46.6	55.62
GSMUA_Achr7P00830_001	Banana	plastid	57.24	53.42
GSMUA_Achr4P32080_001	Banana	plastid	54.8	50.97
Bra039607.1-P	Field mustard	nucleus	51.13	48.03
CDY65603	Canola	plastid	51.31	47.57
AT2G18470.3	Thale cress	plastid	52.53	47.55
KRH76796	Soybean	nucleus, plastid	52.18	47.16
CDY71995	Canola	nucleus, plastid	34.73	46.5
TraesCS4A01G077500.1	Wheat	nucleus	50.09	46.22
CDY59546	Canola	plastid	35.08	46.1
KRH28656	Soybean	nucleus, plastid	50.61	45.89
KRH60853	Soybean	cytosol, plastid	50.61	44.96
PGSC0003DMT400038554	Potato	nucleus, plastid	38.22	44.33
Solyc10g051330.1.1	Tomato	nucleus	46.07	44.0
KRH08293	Soybean	nucleus	45.9	43.91
TraesCS1A01G127900.1	Wheat	plastid	50.26	43.77
CDX99312	Canola	nucleus, plastid	49.91	43.66
CDX75434	Canola	nucleus, plastid	50.96	43.45
Bra011534.1-P	Field mustard	nucleus, plastid	50.96	43.45
CDX95494	Canola	nucleus, plastid	52.01	43.44
KRH69932	Soybean	plastid	46.07	43.42
CDX76282	Canola	nucleus, plastid	49.74	43.12
CDY46249	Canola	nucleus, plastid	49.91	43.07
AT4G34440.1	Thale cress	plastid	50.26	42.99
CDY18547	Canola	nucleus, plastid	51.31	42.92
CDY61983	Canola	cytosol, plastid	52.18	42.9
Solyc02g085430.2.1	Tomato	nucleus, plastid	45.55	42.79
Bra001723.1-P	Field mustard	cytosol, plastid	52.01	42.57
PGSC0003DMT400040010	Potato	nucleus, plastid	47.47	42.3
PGSC0003DMT400001868	Potato	nucleus, plastid	50.09	42.08
CDX82325	Canola	cytosol, plastid	52.36	42.08
TraesCS3A01G152200.1	Wheat	plastid	46.25	42.06
Solyc02g062790.2.1	Tomato	nucleus	47.82	41.9
Bra018782.1-P	Field mustard	plastid	49.56	41.83
CDY48859	Canola	nucleus, plastid	49.91	41.75
AT3G18810.1	Thale cress	nucleus, plastid	50.96	41.71
CDY48084	Canola	nucleus, plastid	49.74	41.55
AT1G49270.1	Thale cress	cytosol, plastid	50.44	41.34
Solyc01g109530.2.1	Tomato	nucleus	49.56	40.69
CDX69059	Canola	endoplasmic reticulum, plasma membrane	50.61	40.62
PGSC0003DMT400062758	Potato	nucleus	50.26	40.22
Solyc11g044460.1.1	Tomato	nucleus	50.26	39.34
PGSC0003DMT400045839	Potato	cytosol, plastid	48.87	38.46
Solyc03g034060.2.1	Tomato	cytosol, plastid	49.39	38.04
TraesCS3A01G278100.1	Wheat	plastid	41.01	34.81
TraesCS3A01G003900.1	Wheat	plastid	40.31	33.62
TraesCS3A01G229800.1	Wheat	plastid	41.54	33.06
TraesCS7A01G231900.1	Wheat	cytosol	41.36	32.55
Bra037220.1-P	Field mustard	nucleus	50.61	31.66
CDY66134	Canola	nucleus	50.44	31.41
CDY51224	Canola	plastid	51.31	31.08
TraesCS3A01G290300.2	Wheat	plastid	42.06	30.82
TraesCS3A01G216100.1	Wheat	mitochondrion, plasma membrane	31.24	23.93
TraesCS3A01G407500.2	Wheat	mitochondrion	22.86	18.85
TraesCS1A01G433100.1	Wheat	cytosol, plastid	31.24	18.67

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.22	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF07714	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF16	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS5A01G411300	EnsemblPlants:TraesCS5A01G411300.1	SEG:seg	:

Description

No Description!

Coordinates

chr5A:-:599978276..599980364

Molecular Weight (calculated)

60335.1 Da

IEP (calculated)

8.829

GRAVY (calculated)

-0.387

Length

573 amino acids

Sequence
(BLAST)

001: MSSNSSSAAP PPPSKSSPPP SAAPPPSPSI SNSSSPAPSS SNDPSPPPAP PKSNGAPASP ARVPSPPAQS SRGSGDSSRS SQTSAHRVSP NTTAEIIFAA
101: AGAAMLLALL IAACVCCSRR TAPRRRRKPH NPMHFYADTS GNKAGSTYYT GGPQPQCQSG TGAGPSTSTS RPPGAAWPLP PGMNSGVYSS PRDQPTSPPA
201: PQETLGLGRG TFTYEELAAA TGGFSQSNLL GQGGFGYVHK GVLPSGRAVA VKQLKSGSGQ GEREFQAEVD IIGRVHHRHL VSLVGHCIAG ASRMLVYEFV
301: PNKTLEFHLH GEGLPPMAWP TRLRIALGAA KGLAYLHEDC HPRIIHRDIK SANILLDNNF EAMVADFGLA KLTYDGITHV STRVMGTFGY LAPEYASSGK
401: LTEKSDVYSY GVMLVELITG RRPIDATAHL VLEDGLVEWA RPALSRALAD GDYDAVADPR LQGSYEPVEM ARVVASAAAC VRHSAKKRPK MSQIVRALEG
501: DMSLEDLNDG VRPGQSRLFE EGAGSCSSDM NRTKVVVVAS PEYSGRFGRP SPVSSDRPIS DEMSPAERQQ PHL

Best Arabidopsis Sequence Match ( AT2G18470.1 )
(BLAST)

001: MASSPESAPP TNSTSSPSPP SNTNSTTSSP PAPSPPSPTP PQGDSSSSPP PDSTSPPAPQ APNPPNSSNN SPSPPSQGGG GERGNGGNNG GNDTPPSRGS
101: PPSPPSRSNG DNGGSRSSPP GDTGGSRSDN PPSSGGSSGG GGGGRSNTNT AIIVGVLVGA GLLMIVLIIV CLRRKKKRKD SFYPEPMKGN QYQYYGNNNN
201: NNASQNYPNW HLNSQGQNQQ STGGWGGGGP SPPPPPRMPT SGEDSSMYSG PSRPVLPPPS PALALGFNKS TFTYQELAAA TGGFTDANLL GQGGFGYVHK
301: GVLPSGKEVA VKSLKAGSGQ GEREFQAEVD IISRVHHRYL VSLVGYCIAD GQRMLVYEFV PNKTLEYHLH GKNLPVMEFS TRLRIALGAA KGLAYLHEDC
401: HPRIIHRDIK SANILLDFNF DAMVADFGLA KLTSDNNTHV STRVMGTFGY LAPEYASSGK LTEKSDVFSY GVMLLELITG KRPVDNSITM DDTLVDWARP
501: LMARALEDGN FNELADARLE GNYNPQEMAR MVTCAAASIR HSGRKRPKMS QIVRALEGEV SLDALNEGVK PGHSNVYGSL GASSDYSQTS YNADMKKFRQ
601: IALSSQEFPV SDCEGTSSND SRDMGTKSPT PPK

Arabidopsis Description

PERK4Proline-rich receptor-like protein kinase PERK4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZNQ8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.