Factsheet for TraesCS3A01G003900.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS4A01G137900.1
TraesCS4B01G148100.1
TraesCS4D01G153300.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G38560.1	TraesCS4A01G137900.1	AT4G26630.1	25387881
AT5G38560.1	TraesCS4B01G148100.1	AT4G26630.1	25387881
AT5G38560.1	TraesCS4D01G153300.1	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G005400.1	Wheat	cytosol	56.33	96.51
TraesCS3B01G008600.2	Wheat	plastid	93.89	94.02
HORVU3Hr1G000770.2	Barley	plastid	88.36	88.61
Solyc02g089750.2.1	Tomato	cytosol	19.36	76.0
Os01t0110500-01	Rice	plasma membrane	73.07	71.92
KXG32101	Sorghum	plastid	72.63	71.39
Zm00001d040127_P001	Maize	plasma membrane	69.72	69.32
Zm00001d008433_P007	Maize	plastid	72.78	68.49
VIT_14s0083g00330.t01	Wine grape	plasma membrane	41.92	66.06
Bra004022.1-P	Field mustard	plastid	35.23	62.21
KRH07595	Soybean	plastid	41.48	53.57
GSMUA_Achr2P09600_001	Banana	plastid	50.66	52.97
CDY01653	Canola	plastid	49.49	51.75
GSMUA_Achr2P14510_001	Banana	plastid	49.49	51.75
Bra028192.1-P	Field mustard	plastid	50.22	51.57
CDX74517	Canola	plastid	49.78	51.51
GSMUA_Achr4P24400_001	Banana	plastid	48.91	50.83
AT5G38560.1	Thale cress	plastid	50.22	50.66
GSMUA_Achr10P...	Banana	plastid	52.69	50.49
PGSC0003DMT400026193	Potato	plastid	49.49	49.85
TraesCS3A01G278100.1	Wheat	plastid	48.76	49.63
TraesCS7A01G231900.1	Wheat	cytosol	52.11	49.18
KRH45181	Soybean	plastid	51.67	49.03
KRH01485	Soybean	plastid	53.71	48.81
VIT_01s0011g02460.t01	Wine grape	plastid	51.53	48.76
CDY04245	Canola	plastid	47.89	48.45
CDY07370	Canola	plastid	46.87	48.35
KRH71097	Soybean	plastid	50.66	47.03
KRH75567	Soybean	plastid	48.33	46.63
AT1G68690.2	Thale cress	plastid	47.89	46.47
CDY59350	Canola	plastid	44.69	46.3
PGSC0003DMT400064597	Potato	plastid	49.93	46.04
Solyc05g010140.2.1	Tomato	plastid	49.64	45.47
Solyc01g010030.2.1	Tomato	plastid	48.03	45.21
AT1G26150.1	Thale cress	plastid	49.93	45.01
PGSC0003DMT400041343	Potato	plastid	48.18	44.79
PGSC0003DMT400019290	Potato	mitochondrion	44.98	44.4
CDX95997	Canola	plastid	46.87	43.87
TraesCS3A01G152200.1	Wheat	plastid	38.28	41.75
TraesCS1A01G127900.1	Wheat	plastid	39.88	41.64
TraesCS5A01G411300.1	Wheat	plastid	33.62	40.31
TraesCS3A01G229800.1	Wheat	plastid	42.21	40.28
CDY16146	Canola	plastid	48.62	39.9
TraesCS4A01G077500.1	Wheat	nucleus	35.81	39.61
Solyc04g006930.2.1	Tomato	plastid	44.83	38.5
Bra004331.1-P	Field mustard	plastid	48.33	38.34
CDY38610	Canola	plastid	49.05	38.25
Bra024725.1-P	Field mustard	plastid	45.12	37.85
TraesCS3A01G290300.2	Wheat	plastid	38.28	33.63
TraesCS3A01G216100.1	Wheat	mitochondrion, plasma membrane	26.93	24.73
TraesCS3A01G407500.2	Wheat	mitochondrion	20.67	20.43
TraesCS1A01G433100.1	Wheat	cytosol, plastid	27.66	19.81

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.22	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	PRINTS:PR01217	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF132	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3A01G003900	EnsemblPlants:TraesCS3A01G003900.1	TIGR:cd14066	SEG:seg

Description

No Description!

Coordinates

chr3A:-:1925388..1928343

Molecular Weight (calculated)

72420.5 Da

IEP (calculated)

6.722

GRAVY (calculated)

-0.429

Length

687 amino acids

Sequence
(BLAST)

001: MASSPSPSPG ATKASPADSV APATSSPFSP APVKLPNDTP ADPPAAPPAP SAAVPPQTPE SPPPPSPSPP PDPVASPPPV PVASPPPTPP ATMPPAQVPP
101: PPAPAADPPK QSPLRPPAPA ASPPPPKSTS PPPSPPDRST APPVPRSPPP RHPGSPPPPT EPQAPPPSVS PIIKPPTSPS PTPVDPTTPT APTTPSPPST
201: PGFGPPSVPT SPTTTPPTPI APNIPQVPSW QDSRPSPSSG GLSNGAKAGI GIVVAILVLS LIGAGCWYKK KRRRMTGYHA GFVMPSPSPS ASPQVLLGHS
301: EKTKTNYSAG SPEFKDTMSE YSMGNCRFFT YEEMHNITNG FSDQNLLGEG GFGSVYKGCL PEGREVAIKK LKDGSGQGER EFQAEVEIIS RVHHRHLVSL
401: VGYCISGDQR LLVYDFVPND TLHYHLHGRG VPVLEWPARV KISAGSAKGI AYLHEDCHPR IIHRDIKSSN ILLDNNFEAQ VADFGLARLA MDFATHVTTR
501: VMGTFGYMAP EYASSGKLTE KSDVFSFGVV LLELITGRKP VDASNPLGDE SLVEWARPLL TQALETGNAG ELLDPRLDKN FNEVELFHMI EAAAACIRYS
601: AARRPRMSQV VRALDSLTDV DLTNGVQPGM SEMFNAPNTA EIRLFQRMAF GSQDFTTDFT QSSSWNSSRQ GGDADASGGP MHSQLQP

Best Arabidopsis Sequence Match ( AT1G26150.1 )
(BLAST)

001: MTTPAQAPRE EVSLSPSLAS PPLMALPPPQ PSFPGDNATS PTREPTNGNP PETTNTPAQS SPPPETPLSS PPPEPSPPSP SLTGPPPTTI PVSPPPEPSP
101: PPPLPTEAPP PANPVSSPPP ESSPPPPPPT EAPPTTPITS PSPPTNPPPP PESPPSLPAP DPPSNPLPPP KLVPPSHSPP RHLPSPPASE IPPPPRHLPS
201: PPASERPSTP PSDSEHPSPP PPGHPKRREQ PPPPGSKRPT PSPPSPSDSK RPVHPSPPSP PEETLPPPKP SPDPLPSNSS SPPTLLPPSS VVSPPSPPRK
301: SVSGPDNPSP NNPTPVTDNS SSSGISIAAV VGVSIGVALV LLTLIGVVVC CLKKRKKRLS TIGGGYVMPT PMESSSPRSD SALLKTQSSA PLVGNRSSNR
401: TYLSQSEPGG FGQSRELFSY EELVIATNGF SDENLLGEGG FGRVYKGVLP DERVVAVKQL KIGGGQGDRE FKAEVDTISR VHHRNLLSMV GYCISENRRL
501: LIYDYVPNNN LYFHLHAAGT PGLDWATRVK IAAGAARGLA YLHEDCHPRI IHRDIKSSNI LLENNFHALV SDFGLAKLAL DCNTHITTRV MGTFGYMAPE
601: YASSGKLTEK SDVFSFGVVL LELITGRKPV DASQPLGDES LVEWARPLLS NATETEEFTA LADPKLGRNY VGVEMFRMIE AAAACIRHSA TKRPRMSQIV
701: RAFDSLAEED LTNGMRLGES EIINSAQQSA EIRLFRRMAF GSQNYSTDSL TRNSYISKDE NL

Arabidopsis Description

PERK10Proline-rich receptor-like protein kinase PERK10 [Source:UniProtKB/Swiss-Prot;Acc:Q9C660]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.