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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 6
  • plasma membrane 1
  • cytosol 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, plasma membrane, plastid
BaCelLo:plastid
EpiLoc:plasma membrane
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
 plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
PPI

Inferred distinct locusB in Crop

locusBlocations
Os03t0596900-01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G38560.1 Os03t0596900-01 AT4G26630.1 25387881
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os05t0100700-02 Rice plasma membrane 31.52 83.65
TraesCS3D01G005400.1 Wheat cytosol 47.42 82.54
KXG32101 Sorghum plastid 79.94 79.83
Solyc02g089750.2.1 Tomato cytosol 19.48 77.71
Zm00001d040127_P001 Maize plasma membrane 76.07 76.85
Zm00001d008433_P007 Maize plastid 78.8 75.34
HORVU3Hr1G000770.2 Barley plastid 73.64 75.04
TraesCS3A01G003900.1 Wheat plastid 71.92 73.07
TraesCS3B01G008600.2 Wheat plastid 71.49 72.74
VIT_14s0083g00330.t01 Wine grape plasma membrane 41.4 66.28
Bra004022.1-P Field mustard plastid 35.53 63.75
GSMUA_Achr2P09600_001 Banana plastid 53.3 56.62
KRH07595 Soybean plastid 41.69 54.7
CDY01653 Canola plastid 50.43 53.58
CDX74517 Canola plastid 50.57 53.16
Bra028192.1-P Field mustard plastid 50.57 52.77
GSMUA_Achr2P14510_001 Banana plastid 49.57 52.66
GSMUA_Achr4P24400_001 Banana plastid 49.43 52.19
GSMUA_Achr10P... Banana plastid 53.44 52.02
PGSC0003DMT400026193 Potato plastid 50.14 51.32
Os01t0738300-01 Rice cytosol 49.28 51.27
AT5G38560.1 Thale cress plastid 50.0 51.25
VIT_01s0011g02460.t01 Wine grape plastid 52.58 50.55
Os06t0488050-00 Rice plasma membrane 50.57 50.5
KRH45181 Soybean plastid 51.15 49.31
KRH01485 Soybean plastid 53.3 49.21
CDY04245 Canola plastid 47.71 49.04
CDY07370 Canola plastid 46.42 48.65
AT1G68690.2 Thale cress plastid 47.99 47.32
KRH71097 Soybean plastid 50.14 47.3
CDY59350 Canola plastid 44.7 47.06
KRH75567 Soybean plastid 47.99 47.05
PGSC0003DMT400064597 Potato plastid 49.86 46.71
Solyc01g010030.2.1 Tomato plastid 48.28 46.16
Solyc05g010140.2.1 Tomato plastid 49.43 46.0
PGSC0003DMT400041343 Potato plastid 48.42 45.74
PGSC0003DMT400019290 Potato mitochondrion 45.13 45.26
AT1G26150.1 Thale cress plastid 49.28 45.14
CDX95997 Canola plastid 47.28 44.96
Os03t0568800-01 Rice cytosol, nucleus, plastid 41.98 43.41
Os01t0227200-01 Rice plasma membrane 36.1 42.21
Os05t0218400-01 Rice plasma membrane 40.4 41.78
Os10t0104800-01 Rice plastid 33.24 40.85
CDY16146 Canola plastid 48.71 40.62
Solyc04g006930.2.1 Tomato plastid 45.27 39.5
Os07t0137800-00 Rice plasma membrane 30.37 39.41
CDY38610 Canola plastid 49.14 38.93
Bra004331.1-P Field mustard plastid 48.28 38.91
Os03t0269300-01 Rice mitochondrion 31.38 38.56
Os06t0486000-01 Rice plasma membrane 41.26 38.5
Bra024725.1-P Field mustard plastid 45.13 38.46
Os09t0314800-00 Rice cytosol, mitochondrion, plasma membrane 16.19 38.44
Os01t0750600-01 Rice plasma membrane 36.53 37.39
Os03t0226901-00 Rice plasma membrane 36.82 36.51
Os05t0516400-01 Rice plastid 37.68 31.8
Os01t0602800-01 Rice cytosol, mitochondrion, nucleus, plasma membrane 27.51 25.63
Os03t0776100-00 Rice plasma membrane 0.43 15.79
Os05t0589700-01 Rice cytosol, nucleus, plasma membrane 10.6 15.16
Os03t0226800-01 Rice plasma membrane 1.29 0.85
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:18.4.1.22Gene3D:3.30.200.20EntrezGene:4326137EMBL:AK101096ProteinID:BAB39873.1ProteinID:BAF03712.1
ProteinID:BAS70009.1ProteinID:EEE53733.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0004674GO:GO:0004675GO:GO:0004871GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0005623GO:GO:0005886GO:GO:0006464GO:GO:0006468GO:GO:0007154GO:GO:0007165
GO:GO:0007166GO:GO:0007178GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538GO:GO:0038023
InterPro:IPR000719InterPro:Kinase-like_dom_sfEnsemblPlantsGene:Os01g0110500EnsemblPlants:Os01t0110500-01PFAM:PF07714PIRSF:PIRSF000641
PRINTS:PR01217ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27001PANTHER:PTHR27001:SF489
InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSUniProt:Q9ASK4SMART:SM00220InterPro:SRK-like_kinaseSUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_ASTMHMM:TMhelixUniParc:UPI00000A47BFRefSeq:XP_015621312.1SEG:seg
Description
Protein kinase, core domain containing protein. (Os01t0110500-01)
Coordinates
chr1:-:554025..558015
Molecular Weight (calculated)
72736.8 Da
IEP (calculated)
7.711
GRAVY (calculated)
-0.323
Length
698 amino acids
Sequence
(BLAST)
001: MASSPSPSPG TATPATAAAA PSTATPTPAT QPNATPADPS ITPPAASPPL PSAATPPPQP DSPPPSPPPA PPVAVPPPAT VPPPPVPVAS PPPTPSATLP
101: PPSPPASVPV PPTPATTPPK PSPVQQPPVA ASPPPSSPAD LPPPNPPARS DTPPVVQSPP PPHRRSPRTP WAPPMAPSPS GSPTKPSPAS PSPIAGDPII
201: PTPNNPSSPL ATPSAPGSGT PVVTPSAPVS GPPSPGTAPA TAADRSNKSL SPNTQDGSVS SSDGGMSSSA KAGIGVVVAI LVLSLVGAAF WYKKKRRRAT
301: GYHAGFVMPS PASSPQVLGY SGKTNYSAGS PDYKETMSEF SMGNCRFFTY EELHQITNGF AAKNLLGEGG FGSVYKGCLA DGREVAVKKL KGGGGQGERE
401: FQAEVEIISR VHHRHLVSLV GYCISGDQRL LVYDFVPNDT LHHHLHGRGM PVLEWSARVK IAAGSARGIA YLHEDCHPRI IHRDIKSSNI LLDNNFEAQV
501: ADFGLARLAM DAVTHVTTRV MGTFGYLAPE YASSGKLTER SDVFSFGVVL LELITGRKPV DASKPLGDES LVEWARPLLT EAIETGNVGE LIDSRLDKNF
601: NEAEMFRMIE AAAACIRHSA SRRPRMSQVV RVLDSLADVD LSNGIQPGKS EMFNVANTAE IRLFQRMAFG SQDFTTDFTQ SSWDSRSRDV DASGSRPL
Best Arabidopsis Sequence Match ( AT5G38560.1 )
(BLAST)
001: MSLVPPLPIL SPPSSNSSTT APPPLQTQPT TPSAPPPVTP PPSPPQSPPP VVSSSPPPPV VSSPPPSSSP PPSPPVITSP PPTVASSPPP PVVIASPPPS
101: TPATTPPAPP QTVSPPPPPD ASPSPPAPTT TNPPPKPSPS PPGETPSPPG ETPSPPKPSP STPTPTTTTS PPPPPATSAS PPSSNPTDPS TLAPPPTPLP
201: VVPREKPIAK PTGPASNNGN NTLPSSSPGK SEVGTGGIVA IGVIVGLVFL SLFVMGVWFT RKRKRKDPGT FVGYTMPPSA YSSPQGSDVV LFNSRSSAPP
301: KMRSHSGSDY MYASSDSGMV SNQRSWFSYD ELSQVTSGFS EKNLLGEGGF GCVYKGVLSD GREVAVKQLK IGGSQGEREF KAEVEIISRV HHRHLVTLVG
401: YCISEQHRLL VYDYVPNNTL HYHLHAPGRP VMTWETRVRV AAGAARGIAY LHEDCHPRII HRDIKSSNIL LDNSFEALVA DFGLAKIAQE LDLNTHVSTR
501: VMGTFGYMAP EYATSGKLSE KADVYSYGVI LLELITGRKP VDTSQPLGDE SLVEWARPLL GQAIENEEFD ELVDPRLGKN FIPGEMFRMV EAAAACVRHS
601: AAKRPKMSQV VRALDTLEEA TDITNGMRPG QSQVFDSRQQ SAQIRMFQRM AFGSQDYSSD FFDRSQSHSS WGSRDQSRFV P
Arabidopsis Description
PERK8Proline-rich receptor-like protein kinase PERK8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFW5]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.