Factsheet for Bra028192.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
plasma membrane 2
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra010432.1-P
Bra026415.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G38560.1	Bra010432.1-P	AT4G26630.1	25387881
AT5G38560.1	Bra026415.1-P	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74517	Canola	plastid	97.46	98.19
CDY01653	Canola	plastid	94.17	95.89
AT5G38560.1	Thale cress	plastid	86.1	84.58
Solyc02g089750.2.1	Tomato	cytosol	20.48	78.29
Os05t0100700-02	Rice	plasma membrane	28.55	72.62
VIT_14s0083g00330.t01	Wine grape	plasma membrane	47.09	72.25
Bra004022.1-P	Field mustard	plastid	39.76	68.38
GSMUA_Achr8P29720_001	Banana	mitochondrion	38.12	63.91
TraesCS3D01G005400.1	Wheat	cytosol	37.97	63.34
TraesCS1B01G001500.1	Wheat	plastid	33.33	62.12
PGSC0003DMT400026193	Potato	plastid	57.25	56.16
Bra034626.1-P	Field mustard	cytosol, nucleus, plastid	32.14	55.41
Zm00001d035774_P001	Maize	plastid	48.43	54.45
GSMUA_Achr1P25240_001	Banana	mitochondrion	38.71	54.07
KRH45181	Soybean	plastid	58.45	54.01
KRH01485	Soybean	plastid	60.39	53.44
KXG20993	Sorghum	plastid	48.13	53.14
KXG32101	Sorghum	plastid	54.86	52.5
GSMUA_Achr2P09600_001	Banana	plastid	51.42	52.36
Zm00001d040127_P001	Maize	plasma membrane	53.96	52.24
Bra011374.1-P	Field mustard	peroxisome	27.95	51.66
GSMUA_Achr4P24400_001	Banana	plastid	50.67	51.29
GSMUA_Achr2P14510_001	Banana	plastid	49.78	50.68
TraesCS3B01G008600.2	Wheat	plastid	51.87	50.58
Os01t0110500-01	Rice	plasma membrane	52.77	50.57
HORVU3Hr1G000770.2	Barley	plastid	51.72	50.51
TraesCS3A01G003900.1	Wheat	plastid	51.57	50.22
Bra037558.1-P	Field mustard	cytosol	21.97	50.17
Zm00001d008433_P007	Maize	plastid	53.96	49.45
GSMUA_Achr10P...	Banana	plastid	52.47	48.95
HORVU3Hr1G070200.1	Barley	plastid	49.03	48.59
TraesCS3A01G278100.1	Wheat	plastid	49.03	48.59
Os01t0738300-01	Rice	cytosol	48.73	48.58
TraesCS3B01G312300.1	Wheat	plastid	49.03	48.45
EES01447	Sorghum	plastid	48.88	48.44
Zm00001d012774_P001	Maize	cytosol, plastid	48.28	48.35
TraesCS3D01G278400.1	Wheat	cytosol, plastid	48.73	48.22
TraesCS1D01G004300.1	Wheat	plastid	46.94	47.87
HORVU1Hr1G000090.3	Barley	plastid	47.09	47.73
Zm00001d043562_P008	Maize	cytosol	48.73	47.59
Bra022359.1-P	Field mustard	plasma membrane	32.88	45.83
Bra007915.1-P	Field mustard	cytosol, plastid	45.44	45.1
Bra038894.1-P	Field mustard	cytosol	11.06	44.58
Bra014321.1-P	Field mustard	plastid	34.23	44.29
Bra016342.1-P	Field mustard	plastid	43.5	44.16
Bra015053.1-P	Field mustard	plastid	42.3	43.94
Bra024608.1-P	Field mustard	nucleus	44.39	42.61
Bra016218.1-P	Field mustard	cytosol, plastid	47.09	41.94
Bra019913.1-P	Field mustard	cytosol, plastid	44.69	41.82
Bra039607.1-P	Field mustard	nucleus	37.67	41.31
Bra024725.1-P	Field mustard	plastid	50.07	40.9
Bra028371.1-P	Field mustard	plastid	40.06	40.61
Bra004331.1-P	Field mustard	plastid	51.72	39.95
Bra011534.1-P	Field mustard	nucleus, plastid	39.76	39.58
Bra018431.1-P	Field mustard	cytosol	41.26	38.82
Bra018782.1-P	Field mustard	plastid	38.42	37.85
Bra021251.1-P	Field mustard	cytosol	6.13	36.94
Bra001723.1-P	Field mustard	cytosol, plastid	36.92	35.29
GSMUA_Achr8P13750_001	Banana	cytosol, nucleus, plastid	43.5	33.18
Bra001520.1-P	Field mustard	cytosol	27.06	29.87
Bra030880.1-P	Field mustard	cytosol	25.56	28.31
Bra037220.1-P	Field mustard	nucleus	37.07	27.07
Bra035630.1-P	Field mustard	cytosol, plasma membrane, plastid	26.31	26.63
Bra027408.1-P	Field mustard	cytosol, mitochondrion, nucleus	28.7	25.7
Bra021501.1-P	Field mustard	cytosol	28.85	25.66
Bra021250.1-P	Field mustard	plasma membrane	34.08	25.05
Bra035231.1-P	Field mustard	plasma membrane	27.06	21.45
Bra021253.1-P	Field mustard	plasma membrane	27.06	16.02
Bra002791.1-P	Field mustard	plasma membrane	27.65	15.29

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.22	Gene3D:3.30.200.20	EnsemblPlantsGene:Bra028192	EnsemblPlants:Bra028192.1	EnsemblPlants:Bra028192.1-P
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0019901	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M4EHC7
PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF132
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix
UniParc:UPI00025445BC	SEG:seg	:	:	:	:

Description

AT5G38560 (E=2e-223) | protein kinase family protein

Coordinates

chrA04:+:6545954..6548358

Molecular Weight (calculated)

70991.7 Da

IEP (calculated)

7.252

GRAVY (calculated)

-0.438

Length

669 amino acids

Sequence
(BLAST)

001: MSLVPPLPIL TPPPSSNSST TSSPPPSSSP PTTPLVPPPV TPPPSPPVPS SSPPPPVISS PPPSSSPPPP VVSSPPPAAA SSPPPPPVVV ASPPPSTPPP
101: APPQDSSPPP PPESSPPAPT TTSSPPPPPS NTPSPPKPSP SPPSDTRSPP PPPSSDKPSP PPPGSTSTPP PASHPTDPAA LAPPPTPLPL VPREKPTPPA
201: SPNANGNNTS SSSPSGVGTG GIVAIGVIVG LLLLSLFVLA LWLTRKRKRK DPGAFVGYTM PPSGYSSPQG SDAVLFNTNS SAPNNKMRSH SGNDYMYASS
301: DSGMVSNQRS WFSYDELAQV TNGFSQKNLL GEGGFGCVYK GVLSDGREIA VKQLKIGGSQ GEREFKAEVE IISRVHHRHL VTLVGYCISE QHRLLVYDYV
401: PNNTLHYHLH APGRPVMTWE TRVKVAAGAA RGIAYLHEDC HPRIIHRDIK SSNILLDNSF EALVADFGLA KIAQELDLNT HVSTRVMGTF GYMAPEYATS
501: GKLSEKADVY SYGVILLELI TGRKPVDTSQ PLGDESLVEW AKPLLSQAIE NEEFGELVDP RLGVNFIAAE MFRMVEAAAA CVRHSAARRP KMSQVVRALD
601: TLEEASDITN GMRPGQSQVY DSRQQSAQIR MFQRMAFGSQ DYSSDFFDRS QSHSSWGSRD TRDQSKFVP

Best Arabidopsis Sequence Match ( AT5G38560.1 )
(BLAST)

001: MSLVPPLPIL SPPSSNSSTT APPPLQTQPT TPSAPPPVTP PPSPPQSPPP VVSSSPPPPV VSSPPPSSSP PPSPPVITSP PPTVASSPPP PVVIASPPPS
101: TPATTPPAPP QTVSPPPPPD ASPSPPAPTT TNPPPKPSPS PPGETPSPPG ETPSPPKPSP STPTPTTTTS PPPPPATSAS PPSSNPTDPS TLAPPPTPLP
201: VVPREKPIAK PTGPASNNGN NTLPSSSPGK SEVGTGGIVA IGVIVGLVFL SLFVMGVWFT RKRKRKDPGT FVGYTMPPSA YSSPQGSDVV LFNSRSSAPP
301: KMRSHSGSDY MYASSDSGMV SNQRSWFSYD ELSQVTSGFS EKNLLGEGGF GCVYKGVLSD GREVAVKQLK IGGSQGEREF KAEVEIISRV HHRHLVTLVG
401: YCISEQHRLL VYDYVPNNTL HYHLHAPGRP VMTWETRVRV AAGAARGIAY LHEDCHPRII HRDIKSSNIL LDNSFEALVA DFGLAKIAQE LDLNTHVSTR
501: VMGTFGYMAP EYATSGKLSE KADVYSYGVI LLELITGRKP VDTSQPLGDE SLVEWARPLL GQAIENEEFD ELVDPRLGKN FIPGEMFRMV EAAAACVRHS
601: AAKRPKMSQV VRALDTLEEA TDITNGMRPG QSQVFDSRQQ SAQIRMFQRM AFGSQDYSSD FFDRSQSHSS WGSRDQSRFV P

Arabidopsis Description

PERK8Proline-rich receptor-like protein kinase PERK8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFW5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.