CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 3
cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
EER91265
OQU91413

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G38560.1	EER91265	AT4G26630.1	25387881
AT5G38560.1	OQU91413	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012774_P001	Maize	cytosol, plastid	93.78	94.76
Zm00001d043562_P008	Maize	cytosol	95.85	94.45
TraesCS3A01G278100.1	Wheat	plastid	85.48	85.48
Os01t0738300-01	Rice	cytosol	84.89	85.39
TraesCS3B01G312300.1	Wheat	plastid	85.63	85.38
HORVU3Hr1G070200.1	Barley	plastid	85.04	85.04
TraesCS3D01G278400.1	Wheat	cytosol, plastid	84.3	84.17
Solyc02g089750.2.1	Tomato	cytosol	19.41	74.86
GSMUA_Achr8P29720_001	Banana	mitochondrion	38.52	65.16
VIT_14s0083g00330.t01	Wine grape	plasma membrane	42.07	65.14
Bra004022.1-P	Field mustard	plastid	36.89	64.01
GSMUA_Achr1P25240_001	Banana	mitochondrion	39.11	55.11
KRH07595	Soybean	plastid	41.78	53.01
PGSC0003DMT400026193	Potato	plastid	50.07	49.56
Bra028192.1-P	Field mustard	plastid	48.44	48.88
CDY01653	Canola	plastid	47.56	48.86
CDY04245	Canola	plastid	49.04	48.75
KXG20993	Sorghum	plastid	43.7	48.68
CDX74517	Canola	plastid	47.85	48.64
KXG32101	Sorghum	plastid	50.22	48.5
AT5G38560.1	Thale cress	plastid	48.89	48.46
CDY07370	Canola	plastid	47.56	48.2
VIT_01s0011g02460.t01	Wine grape	plastid	51.7	48.07
KRH45181	Soybean	plastid	50.37	46.96
KRH75567	Soybean	plastid	49.33	46.77
CDY59350	Canola	plastid	45.63	46.46
KRH71097	Soybean	plastid	50.67	46.22
KRH01485	Soybean	plastid	51.26	45.77
AT1G68690.2	Thale cress	plastid	48.0	45.76
CDX95997	Canola	plastid	48.89	44.96
PGSC0003DMT400064597	Potato	plastid	49.48	44.83
KXG19971	Sorghum	plastid	47.11	44.54
Solyc05g010140.2.1	Tomato	plastid	49.19	44.27
AT1G26150.1	Thale cress	plastid	49.48	43.83
Solyc01g010030.2.1	Tomato	plastid	47.26	43.7
PGSC0003DMT400041343	Potato	plastid	47.7	43.57
PGSC0003DMT400019290	Potato	mitochondrion	44.74	43.39
KXG32962	Sorghum	plastid	42.52	41.06
OQU86081	Sorghum	plastid	37.33	40.65
KXG39820	Sorghum	plastid	34.22	40.38
CDY16146	Canola	plastid	50.07	40.38
EER91832	Sorghum	plastid	32.74	39.68
EES19240	Sorghum	cytosol, plasma membrane, plastid	33.93	39.35
Bra004331.1-P	Field mustard	plastid	49.33	38.45
Bra024725.1-P	Field mustard	plastid	46.37	38.22
EER90803	Sorghum	plastid	34.07	38.14
CDY38610	Canola	plastid	49.48	37.91
Solyc04g006930.2.1	Tomato	plastid	43.7	36.88
KXG39708	Sorghum	plastid	30.52	36.33
GSMUA_Achr8P13750_001	Banana	cytosol, nucleus, plastid	45.63	35.12
EER97954	Sorghum	plastid	29.63	34.97
KXG33373	Sorghum	plastid	35.11	33.33
EES18801	Sorghum	cytosol	25.78	23.84
KXG22354	Sorghum	plastid	37.93	23.19
EES01025	Sorghum	plasma membrane	25.19	22.7
KXG33822	Sorghum	mitochondrion	22.81	22.51

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.22	Gene3D:3.30.200.20	EntrezGene:8075547	UniProt:C5XJ70	EnsemblPlants:EES01447
ProteinID:EES01447	ProteinID:EES01447.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166
GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF07714	PRINTS:PR01217	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF66	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	EnsemblPlantsGene:SORBI_3003G289800	SUPFAM:SSF56112
unigene:Sbi.21410	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI0001A84929	RefSeq:XP_002456327.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:62231642..62236073

Molecular Weight (calculated)

72497.8 Da

IEP (calculated)

7.545

GRAVY (calculated)

-0.439

Length

675 amino acids

Sequence
(BLAST)

001: MGYGYVDPFL PPQQQRQAAY VAPQGDFGQP QAQPAPRPPA CPYSSSASAP PVSATYHSSP PATSPPPVSS PPPASPLPEP SPPPPAPLPP SPPPPALSPP
101: LPDAPPPSLP PSPLPYPTPS PPQAPPPPQA TDQPRVQPRV YPSPPPPSLP PPPPPTVSPP SPAPSNSPSP SPAPAAQAPA PARVAAYSPP PPRIAPPPPP
201: HYHGKSHYTP HSPVKSHSNS THAASGSGKN IEISREAATT IVALAGLAML SFIGATIWFV KKKRRRIEPP AALPTQQPAP PPPPNYIPSS AGSSLASDGF
301: YLRSPGYPFM RYSTGSHGFP YSPADSGIGY SHMLFTPENL AAITDDFAEE NLLGEGGFGC VFKGILPDGR PVAVKKLKIG NGQGEREFKA EVDTISRVHH
401: RHLVSLVGYC IAEGQRMLVY DFVPNNTLYY HLHVSEASLD WRTRVKIAAG AARGIGYLHE DCHPRIIHRD IKSSNILLDN NFEAQVSDFG LARLAADSNT
501: HVTTRVMGTF GYLAPEYALS GKLTAKSDVY SFGVVLLELI TGRKPVDASQ PLGDESLVEW ARPLLMKAIE HREFGDLPDP RMENRFDENE MFHMIGAAAA
601: CIRHSAAMRP RMGQVVRALD SLADSNLNNG LQPGRSEVFL EPQSEEIRLF QLREFGSRDC SDELSQASWR SRRDL

Best Arabidopsis Sequence Match ( AT5G38560.1 )
(BLAST)

001: MSLVPPLPIL SPPSSNSSTT APPPLQTQPT TPSAPPPVTP PPSPPQSPPP VVSSSPPPPV VSSPPPSSSP PPSPPVITSP PPTVASSPPP PVVIASPPPS
101: TPATTPPAPP QTVSPPPPPD ASPSPPAPTT TNPPPKPSPS PPGETPSPPG ETPSPPKPSP STPTPTTTTS PPPPPATSAS PPSSNPTDPS TLAPPPTPLP
201: VVPREKPIAK PTGPASNNGN NTLPSSSPGK SEVGTGGIVA IGVIVGLVFL SLFVMGVWFT RKRKRKDPGT FVGYTMPPSA YSSPQGSDVV LFNSRSSAPP
301: KMRSHSGSDY MYASSDSGMV SNQRSWFSYD ELSQVTSGFS EKNLLGEGGF GCVYKGVLSD GREVAVKQLK IGGSQGEREF KAEVEIISRV HHRHLVTLVG
401: YCISEQHRLL VYDYVPNNTL HYHLHAPGRP VMTWETRVRV AAGAARGIAY LHEDCHPRII HRDIKSSNIL LDNSFEALVA DFGLAKIAQE LDLNTHVSTR
501: VMGTFGYMAP EYATSGKLSE KADVYSYGVI LLELITGRKP VDTSQPLGDE SLVEWARPLL GQAIENEEFD ELVDPRLGKN FIPGEMFRMV EAAAACVRHS
601: AAKRPKMSQV VRALDTLEEA TDITNGMRPG QSQVFDSRQQ SAQIRMFQRM AFGSQDYSSD FFDRSQSHSS WGSRDQSRFV P

Arabidopsis Description

PERK8Proline-rich receptor-like protein kinase PERK8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFW5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.