Factsheet for VIT_01s0011g02460.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0083g00330.t01	Wine grape	plasma membrane	46.14	76.83
Os05t0100700-02	Rice	plasma membrane	26.72	73.76
Bra004022.1-P	Field mustard	plastid	39.26	73.26
GSMUA_Achr8P29720_001	Banana	mitochondrion	37.6	68.42
KRH07595	Soybean	plastid	47.93	65.41
TraesCS3D01G005400.1	Wheat	cytosol	35.81	64.84
TraesCS1B01G001500.1	Wheat	plastid	31.96	64.62
KRH75567	Soybean	plastid	61.71	62.92
KRH71097	Soybean	plastid	63.64	62.43
CDY07370	Canola	plastid	55.79	60.81
CDY04245	Canola	plastid	56.47	60.38
CDY59350	Canola	plastid	55.1	60.33
AT1G68690.2	Thale cress	plastid	58.26	59.75
GSMUA_Achr1P25240_001	Banana	mitochondrion	39.12	59.29
GSMUA_Achr2P09600_001	Banana	plastid	52.75	58.3
GSMUA_Achr4P24400_001	Banana	plastid	52.48	57.64
GSMUA_Achr2P14510_001	Banana	plastid	51.24	56.62
AT1G26150.1	Thale cress	plastid	59.37	56.56
PGSC0003DMT400019290	Potato	mitochondrion	53.58	55.89
PGSC0003DMT400064597	Potato	plastid	57.3	55.84
CDX95997	Canola	plastid	56.34	55.72
Solyc05g010140.2.1	Tomato	plastid	57.16	55.33
Solyc01g010030.2.1	Tomato	plastid	55.51	55.21
Zm00001d035774_P001	Maize	plastid	44.77	54.62
PGSC0003DMT400041343	Potato	plastid	55.37	54.4
GSMUA_Achr10P...	Banana	plastid	53.58	54.25
VIT_03s0063g02440.t01	Wine grape	plastid	31.27	53.66
KXG20993	Sorghum	plastid	44.49	53.3
Os01t0738300-01	Rice	cytosol	48.9	52.91
Zm00001d040127_P001	Maize	plasma membrane	50.28	52.82
KXG32101	Sorghum	plastid	50.83	52.79
Os01t0110500-01	Rice	plasma membrane	50.55	52.58
CDY16146	Canola	plastid	60.06	52.09
EES01447	Sorghum	plastid	48.07	51.7
TraesCS3D01G278400.1	Wheat	cytosol, plastid	48.07	51.63
TraesCS3A01G278100.1	Wheat	plastid	47.93	51.56
TraesCS3A01G003900.1	Wheat	plastid	48.76	51.53
TraesCS3B01G312300.1	Wheat	plastid	47.8	51.26
TraesCS3B01G008600.2	Wheat	plastid	48.35	51.17
HORVU3Hr1G070200.1	Barley	plastid	47.52	51.11
HORVU3Hr1G000770.2	Barley	plastid	48.21	51.09
Zm00001d012774_P001	Maize	cytosol, plastid	46.97	51.05
TraesCS1D01G004300.1	Wheat	plastid	45.73	50.61
Bra024725.1-P	Field mustard	plastid	56.75	50.31
Zm00001d043562_P008	Maize	cytosol	47.25	50.07
Zm00001d008433_P007	Maize	plastid	50.28	50.0
VIT_04s0023g01570.t01	Wine grape	nucleus	30.99	49.78
HORVU1Hr1G000090.3	Barley	plastid	44.77	49.24
VIT_01s0127g00670.t01	Wine grape	plastid	45.32	48.96
Bra004331.1-P	Field mustard	plastid	57.44	48.15
CDY38610	Canola	plastid	58.4	48.13
VIT_01s0127g00890.t01	Wine grape	mitochondrion	17.08	46.79
Solyc04g006930.2.1	Tomato	plastid	51.52	46.75
VIT_11s0016g03880.t01	Wine grape	plastid	41.6	46.46
VIT_09s0002g04210.t01	Wine grape	plastid	33.61	44.28
GSMUA_Achr8P13750_001	Banana	cytosol, nucleus, plastid	45.18	37.4
VIT_13s0067g01620.t01	Wine grape	cytosol, plastid	18.46	34.18
VIT_09s0002g02420.t01	Wine grape	cytosol	27.55	26.77
VIT_11s0016g02430.t01	Wine grape	plasma membrane	25.9	24.97
VIT_18s0001g11590.t01	Wine grape	cytosol	22.73	22.82
VIT_18s0001g14990.t01	Wine grape	cytosol, nucleus, peroxisome	19.56	18.16

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100247397	wikigene:100247397	MapMan:18.4.1.22	Gene3D:3.30.200.20	ProteinID:CBI27111
ProteinID:CBI27111.3	UniProt:D7T9E0	EMBL:FN595752	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	EntrezGene:LOC100247397	wikigene:LOC100247397	PFAM:PF07714	PRINTS:PR01217	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF489	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TIGR:TC52718	TMHMM:TMhelix
UniParc:UPI00019829A2	ArrayExpress:VIT_01s0011g02460	EnsemblPlantsGene:VIT_01s0011g02460	EnsemblPlants:VIT_01s0011g02460.t01	unigene:Vvi.6482	RefSeq:XP_002277905
RefSeq:XP_002277905.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr1:+:2242232..2247259

Molecular Weight (calculated)

75453.5 Da

IEP (calculated)

6.746

GRAVY (calculated)

-0.540

Length

726 amino acids

Sequence
(BLAST)

001: MATASPPPNS SPSAVPPTSA ATPPPPLSSP PPPPESSTPP SSQPNADPPD GAAGSTSSPP PQSPPAVPAA PPPASPPPPP PTPSLANSPS SPPPPSPPPP
101: SPNAPPPTPP PSPPIAPVPP PSNPSPPPLT PPPTSPPPPP PPTNPPRSPP PPPPTEPPVT SPPPPSSNPP KSSPPPSEPP KTSPPPPSKP PPVSPPSPSP
201: SSPPEDSPPP PVPVPPSNST PPAPSPSGSQ PATPPSPNSP PKGSPPPPRT PTPPPPARSP PPLSPPSSPQ TPNSPSDSPS VNNSTPNGSP NSTSKGGIGT
301: VGTVAIGLVL GLVVLVLIGV AFLCLRKRKK KVSGLNGGYV MPATLGSSPR SDSSFTKTLS SAPLIGSGSG SDFVYSPSEP GGLGNSRSWF TYEELVKATN
401: GFSTQNLLGE GGFGSVYKGY LPDGREIAVK QLKIGGAQGE REFKAEVEII SRIHHRHLVS LVGYCISESQ RLLVYDYVPN NTLYFHLHGE GRPVMDWATR
501: VKVAAGAARG IAYLHEDCHP RVIHRDIKSS NILLNYNFEA QVSDFGLAKL ALDADTHVTT RVMGTFGYMA PEYASSGKLT EKSDVFSFGV VLLELITGRK
601: PVDASQPVGD ESLVEWARPL LSHALENEEF EGLTDPRLEK NYVESEMFRM LEAAAACVRH SAAKRPRMGQ VVRAFDSMGT SDLSNGMRVG ESEVFNSAQQ
701: SEEIRWFQRM AFGSQDYSTD FFSQGG

Best Arabidopsis Sequence Match ( AT1G23540.1 )
(BLAST)

001: MSDLGESPSS SPPAPPADTA PPPETPSENS ALPPVDSSPP SPPADSSSTP PLSEPSTPPP DSQLPPLPSI LPPLTDSPPP PSDSSPPVDS TPSPPPPTSN
101: ESPSPPEDSE TPPAPPNESN DNNPPPSQDL QSPPPSSPSP NVGPTNPESP PLQSPPAPPA SDPTNSPPAS PLDPTNPPPI QPSGPATSPP ANPNAPPSPF
201: PTVPPKTPSS GPVVSPSLTS PSKGTPTPNQ GNGDGGGGGG GYQGKTMVGM AVAGFAIMAL IGVVFLVRRK KKRNIDSYNH SQYLPHPNFS VKSDGFLYGQ
301: DPGKGYSSGP NGSMYNNSQQ QQSSMGNSYG TAGGGYPHHQ MQSSGTPDSA ILGSGQTHFS YEELAEITQG FARKNILGEG GFGCVYKGTL QDGKVVAVKQ
401: LKAGSGQGDR EFKAEVEIIS RVHHRHLVSL VGYCISDQHR LLIYEYVSNQ TLEHHLHGKG LPVLEWSKRV RIAIGSAKGL AYLHEDCHPK IIHRDIKSAN
501: ILLDDEYEAQ VADFGLARLN DTTQTHVSTR VMGTFGYLAP EYASSGKLTD RSDVFSFGVV LLELVTGRKP VDQTQPLGEE SLVEWARPLL LKAIETGDLS
601: ELIDTRLEKR YVEHEVFRMI ETAAACVRHS GPKRPRMVQV VRALDCDGDS GDISNGIKIG QSTTYDSGQY NEDIMKFRKM AFGGDNSVES GLYSGNYSAK
701: SSSDFSGNES ETRPFNNRRF

Arabidopsis Description

PERK12Proline-rich receptor-like protein kinase PERK12 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUE0]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.