Factsheet for GSMUA_Achr8P29720_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
plasma membrane 1
mitochondrion 6
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr9P09250_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G38560.1	GSMUA_Achr9P09250_001	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g089750.2.1	Tomato	cytosol	32.83	74.86
GSMUA_Achr1P25240_001	Banana	mitochondrion	80.45	67.01
VIT_14s0083g00330.t01	Wine grape	plasma membrane	68.17	62.39
Bra004022.1-P	Field mustard	plastid	59.65	61.18
GSMUA_Achr8P19800_001	Banana	cytosol	53.13	51.46
GSMUA_Achr5P06880_001	Banana	plastid	52.38	50.48
KRH07595	Soybean	plastid	61.9	46.43
GSMUA_Achr7P26790_001	Banana	plastid	50.63	46.33
GSMUA_Achr10P...	Banana	plastid	53.13	43.27
GSMUA_Achr2P09600_001	Banana	plastid	67.17	40.79
GSMUA_Achr2P14510_001	Banana	plastid	66.17	40.18
PGSC0003DMT400026193	Potato	plastid	67.42	39.44
TraesCS3A01G278100.1	Wheat	plastid	66.17	39.11
TraesCS3D01G278400.1	Wheat	cytosol, plastid	66.17	39.05
HORVU3Hr1G070200.1	Barley	plastid	65.91	38.96
GSMUA_Achr7P14360_001	Banana	plastid	52.88	38.93
TraesCS3B01G312300.1	Wheat	plastid	65.91	38.85
Zm00001d012774_P001	Maize	cytosol, plastid	64.66	38.62
GSMUA_Achr4P24400_001	Banana	plastid	63.91	38.58
KRH45181	Soybean	plastid	69.92	38.54
EES01447	Sorghum	plastid	65.16	38.52
CDY59350	Canola	plastid	63.66	38.31
Os01t0738300-01	Rice	cytosol	64.16	38.15
Bra028192.1-P	Field mustard	plastid	63.91	38.12
CDY01653	Canola	plastid	62.66	38.05
CDX74517	Canola	plastid	62.91	37.8
VIT_01s0011g02460.t01	Wine grape	plastid	68.42	37.6
AT5G38560.1	Thale cress	plastid	64.16	37.59
GSMUA_Achr6P27340_001	Banana	cytosol, endoplasmic reticulum, plastid	49.12	37.55
Zm00001d043562_P008	Maize	cytosol	63.91	37.23
GSMUA_Achr7P14350_001	Banana	plasma membrane	42.36	37.22
CDY07370	Canola	plastid	61.9	37.09
GSMUA_Achr7P14330_001	Banana	plasma membrane	40.6	37.07
GSMUA_Achr8P13750_001	Banana	cytosol, nucleus, plastid	81.2	36.94
KRH01485	Soybean	plastid	69.42	36.64
CDY04245	Canola	plastid	61.9	36.38
KRH75567	Soybean	plastid	64.41	36.1
GSMUA_Achr5P02090_001	Banana	nucleus	52.88	35.88
GSMUA_Achr10P...	Banana	plastid	64.41	35.84
GSMUA_Achr10P...	Banana	cytosol	53.13	35.33
AT1G68690.2	Thale cress	plastid	62.66	35.31
KRH71097	Soybean	plastid	64.91	35.0
PGSC0003DMT400019290	Potato	mitochondrion	60.4	34.63
GSMUA_Achr7P00830_001	Banana	plastid	53.13	34.53
GSMUA_Achr4P10790_001	Banana	plastid	54.39	34.07
PGSC0003DMT400064597	Potato	plastid	62.91	33.69
PGSC0003DMT400041343	Potato	plastid	61.9	33.42
Solyc01g010030.2.1	Tomato	plastid	60.65	33.15
GSMUA_Achr10P...	Banana	plastid	45.61	33.09
Solyc05g010140.2.1	Tomato	plastid	62.16	33.07
CDX95997	Canola	plastid	59.9	32.56
AT1G26150.1	Thale cress	plastid	62.16	32.55
GSMUA_Achr4P32080_001	Banana	plastid	50.13	32.47
GSMUA_Achr1P13940_001	Banana	plastid	56.64	32.01
GSMUA_Achr4P03200_001	Banana	mitochondrion, plasma membrane	53.63	31.52
CDY16146	Canola	plastid	63.41	30.23
Solyc04g006930.2.1	Tomato	plastid	58.65	29.25
Bra024725.1-P	Field mustard	plastid	58.65	28.57
Bra004331.1-P	Field mustard	plastid	61.15	28.18
CDY38610	Canola	plastid	61.15	27.7
GSMUA_Achr3P15710_001	Banana	plastid	50.38	27.53
GSMUA_Achr6P18630_001	Banana	cytosol, nucleus, plasma membrane	32.08	23.84
GSMUA_Achr6P26510_001	Banana	cytosol	41.35	23.04
GSMUA_Achr1P04890_001	Banana	cytosol	40.35	22.71
GSMUA_Achr9P05910_001	Banana	plasma membrane	40.85	22.12
GSMUA_Achr8P04820_001	Banana	cytosol, plasma membrane, plastid	36.09	19.07
GSMUA_Achr5P07770_001	Banana	cytosol	33.33	17.69

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.22	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr8G29720_001
EnsemblPlants:GSMUA_Achr8P29720_001	EnsemblPlants:GSMUA_Achr8T29720_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0TUS4	PFAM:PF00069
PIRSF:PIRSF000654	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF489	InterPro:Prot_kinase_dom
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000296176D	SEG:seg	:

Description

retrotransposon protein, putative, unclassified, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr8G29720_001]

Coordinates

chr8:+:32030890..32034665

Molecular Weight (calculated)

44430.9 Da

IEP (calculated)

7.064

GRAVY (calculated)

-0.280

Length

399 amino acids

Sequence
(BLAST)

001: MLTFVGAAVW LVKKHKKPFA PTAYRGNLVL ASPASSHASG KAWRSYGFHY SPSDLGLGHT KLWFTLEELS IITNDFSTQN LLGEGGCGCV YKGRLRDGRE
101: VAVKQIKVGG AQGEREFKSE VETISRVHHR HLVSLVGYCV SENQRLLVYD YVPNRTLYYH LHGKGMPIME WTVRVKVAVG AARGIAYLHE DCHPRIIHRD
201: IKSSNILLDY SFEAQVSDFG LARMAVDANA HVTTCVMGTF GYLAPEYATS GKLTSNSDVY SFGVVLLELI TGRKPVDTSQ PVGDESLVEW ARPLLIQALE
301: NGDFGDLPDP RLDGNYNKDE MFRMIEIAAA CTRHSSTMRP RMGQVVRALE SLADLDINNG VRPGQSEVFD SSQQSEEIRM FQKMGFASQE HDSDYSRTN

Best Arabidopsis Sequence Match ( AT5G38560.1 )
(BLAST)

001: MSLVPPLPIL SPPSSNSSTT APPPLQTQPT TPSAPPPVTP PPSPPQSPPP VVSSSPPPPV VSSPPPSSSP PPSPPVITSP PPTVASSPPP PVVIASPPPS
101: TPATTPPAPP QTVSPPPPPD ASPSPPAPTT TNPPPKPSPS PPGETPSPPG ETPSPPKPSP STPTPTTTTS PPPPPATSAS PPSSNPTDPS TLAPPPTPLP
201: VVPREKPIAK PTGPASNNGN NTLPSSSPGK SEVGTGGIVA IGVIVGLVFL SLFVMGVWFT RKRKRKDPGT FVGYTMPPSA YSSPQGSDVV LFNSRSSAPP
301: KMRSHSGSDY MYASSDSGMV SNQRSWFSYD ELSQVTSGFS EKNLLGEGGF GCVYKGVLSD GREVAVKQLK IGGSQGEREF KAEVEIISRV HHRHLVTLVG
401: YCISEQHRLL VYDYVPNNTL HYHLHAPGRP VMTWETRVRV AAGAARGIAY LHEDCHPRII HRDIKSSNIL LDNSFEALVA DFGLAKIAQE LDLNTHVSTR
501: VMGTFGYMAP EYATSGKLSE KADVYSYGVI LLELITGRKP VDTSQPLGDE SLVEWARPLL GQAIENEEFD ELVDPRLGKN FIPGEMFRMV EAAAACVRHS
601: AAKRPKMSQV VRALDTLEEA TDITNGMRPG QSQVFDSRQQ SAQIRMFQRM AFGSQDYSSD FFDRSQSHSS WGSRDQSRFV P

Arabidopsis Description

PERK8Proline-rich receptor-like protein kinase PERK8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFW5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.