Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
TraesCS4A01G137900.1 | |
TraesCS4B01G148100.1 | |
TraesCS4D01G153300.1 |
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT5G38560.1 | TraesCS4A01G137900.1 | AT4G26630.1 | 25387881 |
AT5G38560.1 | TraesCS4B01G148100.1 | AT4G26630.1 | 25387881 |
AT5G38560.1 | TraesCS4D01G153300.1 | AT4G26630.1 | 25387881 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS3A01G278100.1 | Wheat | plastid | 98.97 | 99.26 |
HORVU3Hr1G070200.1 | Barley | plastid | 98.23 | 98.52 |
TraesCS3D01G278400.1 | Wheat | cytosol, plastid | 97.19 | 97.34 |
EES01447 | Sorghum | plastid | 85.38 | 85.63 |
Zm00001d012774_P001 | Maize | cytosol, plastid | 82.42 | 83.53 |
Zm00001d043562_P008 | Maize | cytosol | 83.9 | 82.92 |
Os01t0738300-01 | Rice | cytosol | 81.54 | 82.27 |
Solyc02g089750.2.1 | Tomato | cytosol | 19.65 | 76.0 |
GSMUA_Achr8P29720_001 | Banana | mitochondrion | 38.85 | 65.91 |
VIT_14s0083g00330.t01 | Wine grape | plasma membrane | 41.51 | 64.45 |
Bra004022.1-P | Field mustard | plastid | 35.89 | 62.47 |
TraesCS1B01G001500.1 | Wheat | plastid | 31.76 | 59.89 |
GSMUA_Achr1P25240_001 | Banana | mitochondrion | 39.0 | 55.11 |
KRH07595 | Soybean | plastid | 40.47 | 51.5 |
PGSC0003DMT400026193 | Potato | plastid | 51.11 | 50.73 |
Bra028192.1-P | Field mustard | plastid | 48.45 | 49.03 |
CDX74517 | Canola | plastid | 47.86 | 48.8 |
TraesCS3B01G008600.2 | Wheat | plastid | 49.34 | 48.69 |
CDY01653 | Canola | plastid | 47.12 | 48.55 |
CDY04245 | Canola | plastid | 48.6 | 48.45 |
CDY07370 | Canola | plastid | 47.12 | 47.9 |
VIT_01s0011g02460.t01 | Wine grape | plastid | 51.26 | 47.8 |
AT5G38560.1 | Thale cress | plastid | 47.71 | 47.43 |
KRH45181 | Soybean | plastid | 50.37 | 47.1 |
KRH75567 | Soybean | plastid | 48.74 | 46.35 |
CDY59350 | Canola | plastid | 45.35 | 46.3 |
KRH71097 | Soybean | plastid | 50.22 | 45.95 |
KRH01485 | Soybean | plastid | 51.26 | 45.9 |
AT1G68690.2 | Thale cress | plastid | 47.86 | 45.76 |
PGSC0003DMT400064597 | Potato | plastid | 49.19 | 44.7 |
CDX95997 | Canola | plastid | 47.86 | 44.14 |
Solyc05g010140.2.1 | Tomato | plastid | 48.6 | 43.87 |
Solyc01g010030.2.1 | Tomato | plastid | 47.12 | 43.7 |
AT1G26150.1 | Thale cress | plastid | 48.89 | 43.44 |
TraesCS7B01G130400.2 | Wheat | cytosol | 48.89 | 43.32 |
PGSC0003DMT400019290 | Potato | mitochondrion | 44.46 | 43.25 |
PGSC0003DMT400041343 | Potato | plastid | 47.12 | 43.17 |
TraesCS1B01G350100.1 | Wheat | cytosol | 27.77 | 41.69 |
TraesCS3B01G259100.1 | Wheat | cytosol, plastid | 42.69 | 41.4 |
TraesCS3B01G179300.1 | Wheat | plastid | 37.96 | 40.73 |
CDY16146 | Canola | plastid | 49.48 | 40.02 |
TraesCS1B01G147000.2 | Wheat | plastid | 36.19 | 39.71 |
TraesCS4B01G233600.1 | Wheat | nucleus, plastid | 34.86 | 38.19 |
TraesCS5B01G415000.1 | Wheat | plastid | 34.27 | 37.85 |
Bra004331.1-P | Field mustard | plastid | 48.3 | 37.76 |
CDY38610 | Canola | plastid | 48.74 | 37.46 |
Bra024725.1-P | Field mustard | plastid | 45.2 | 37.36 |
Solyc04g006930.2.1 | Tomato | plastid | 43.57 | 36.88 |
TraesCS7B01G131000.1 | Wheat | nucleus, plastid | 40.77 | 36.65 |
GSMUA_Achr8P13750_001 | Banana | cytosol, nucleus, plastid | 45.64 | 35.23 |
TraesCS3B01G325100.2 | Wheat | plastid | 35.75 | 29.84 |
TraesCS3B01G245800.1 | Wheat | mitochondrion, plasma membrane | 24.67 | 22.3 |
TraesCS3B01G440700.2 | Wheat | mitochondrion | 21.57 | 21.01 |
TraesCS1B01G468900.1 | Wheat | plastid | 25.7 | 19.38 |
Protein Annotations
Gene3D:1.10.510.10 | MapMan:18.4.1.22 | Gene3D:3.30.200.20 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 |
GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 |
InterPro:Kinase-like_dom_sf | PFAM:PF07714 | PRINTS:PR01217 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 |
PANTHER:PTHR27001 | PANTHER:PTHR27001:SF66 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF56112 |
InterPro:Ser-Thr/Tyr_kinase_cat_dom | InterPro:Ser/Thr_kinase_AS | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS3B01G312300 | EnsemblPlants:TraesCS3B01G312300.1 | TIGR:cd14066 |
SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr3B:-:501497876..501501467
Molecular Weight (calculated)
72608.0 Da
IEP (calculated)
8.157
GRAVY (calculated)
-0.493
Length
677 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGYADPFMP PQPASSSSYA VPQGGHGQPQ PQPAPRPPGC PYSSSASAPP VSTSYHSLPP AASPPPVSSP PPASPPPETL PSPPPALPSS PPPPALSPPP
101: PDAPPPSLPP PSPSPSPPPA EVQAPPPPMA ADQPRVQPRV YPSPPPPSLP PPPPVVLSPP APPPSHPPSP SPTPAPAPAP TPVAAYSPPP PRIASPPPPP
201: RHHTKPHYAP PRSPGRPHSN STRSNGSGKN IEISRETATT IVAIAGLAML SFIGATIWLV KKKRRRAEPP SALPIQQQPA PPPPPPNYIP SSAGSSLASD
301: GFYLRSPGYP FMRSSTGSHG FPYSPADSGI GYSRMLFTPE NLAGISNDFS DENLLGEGGF GCVYKGILPD GRPVAIKKLK IGNGQGEREF RAEVDTISRV
401: HHRHLVSLVG YCVSEGQRML VYDFVPNNTL YYHLHVNEVP LDWRTRVKIA AGAARGIAYL HEDCHPRIIH RDIKSSNILL DNNYEAQVSD FGLARLAADS
501: NTHVTTRVMG TFGYLAPEYA LSGKLTAKSD LYSFGVVLLE LITGRKPVDS SQPLGDESLV EWARPFLSQA IEHRDFGDLP DPRMENKFEE NEMYHMIGAA
601: AACIRHSAVM RPRMGQVVRA LDSLADSNLN NGLQPGRSEV FLEPRTEEIR LFQLREFGSR ECSDELSQAS WRSRRDL
101: PDAPPPSLPP PSPSPSPPPA EVQAPPPPMA ADQPRVQPRV YPSPPPPSLP PPPPVVLSPP APPPSHPPSP SPTPAPAPAP TPVAAYSPPP PRIASPPPPP
201: RHHTKPHYAP PRSPGRPHSN STRSNGSGKN IEISRETATT IVAIAGLAML SFIGATIWLV KKKRRRAEPP SALPIQQQPA PPPPPPNYIP SSAGSSLASD
301: GFYLRSPGYP FMRSSTGSHG FPYSPADSGI GYSRMLFTPE NLAGISNDFS DENLLGEGGF GCVYKGILPD GRPVAIKKLK IGNGQGEREF RAEVDTISRV
401: HHRHLVSLVG YCVSEGQRML VYDFVPNNTL YYHLHVNEVP LDWRTRVKIA AGAARGIAYL HEDCHPRIIH RDIKSSNILL DNNYEAQVSD FGLARLAADS
501: NTHVTTRVMG TFGYLAPEYA LSGKLTAKSD LYSFGVVLLE LITGRKPVDS SQPLGDESLV EWARPFLSQA IEHRDFGDLP DPRMENKFEE NEMYHMIGAA
601: AACIRHSAVM RPRMGQVVRA LDSLADSNLN NGLQPGRSEV FLEPRTEEIR LFQLREFGSR ECSDELSQAS WRSRRDL
001: MTTPAQAPRE EVSLSPSLAS PPLMALPPPQ PSFPGDNATS PTREPTNGNP PETTNTPAQS SPPPETPLSS PPPEPSPPSP SLTGPPPTTI PVSPPPEPSP
101: PPPLPTEAPP PANPVSSPPP ESSPPPPPPT EAPPTTPITS PSPPTNPPPP PESPPSLPAP DPPSNPLPPP KLVPPSHSPP RHLPSPPASE IPPPPRHLPS
201: PPASERPSTP PSDSEHPSPP PPGHPKRREQ PPPPGSKRPT PSPPSPSDSK RPVHPSPPSP PEETLPPPKP SPDPLPSNSS SPPTLLPPSS VVSPPSPPRK
301: SVSGPDNPSP NNPTPVTDNS SSSGISIAAV VGVSIGVALV LLTLIGVVVC CLKKRKKRLS TIGGGYVMPT PMESSSPRSD SALLKTQSSA PLVGNRSSNR
401: TYLSQSEPGG FGQSRELFSY EELVIATNGF SDENLLGEGG FGRVYKGVLP DERVVAVKQL KIGGGQGDRE FKAEVDTISR VHHRNLLSMV GYCISENRRL
501: LIYDYVPNNN LYFHLHAAGT PGLDWATRVK IAAGAARGLA YLHEDCHPRI IHRDIKSSNI LLENNFHALV SDFGLAKLAL DCNTHITTRV MGTFGYMAPE
601: YASSGKLTEK SDVFSFGVVL LELITGRKPV DASQPLGDES LVEWARPLLS NATETEEFTA LADPKLGRNY VGVEMFRMIE AAAACIRHSA TKRPRMSQIV
701: RAFDSLAEED LTNGMRLGES EIINSAQQSA EIRLFRRMAF GSQNYSTDSL TRNSYISKDE NL
101: PPPLPTEAPP PANPVSSPPP ESSPPPPPPT EAPPTTPITS PSPPTNPPPP PESPPSLPAP DPPSNPLPPP KLVPPSHSPP RHLPSPPASE IPPPPRHLPS
201: PPASERPSTP PSDSEHPSPP PPGHPKRREQ PPPPGSKRPT PSPPSPSDSK RPVHPSPPSP PEETLPPPKP SPDPLPSNSS SPPTLLPPSS VVSPPSPPRK
301: SVSGPDNPSP NNPTPVTDNS SSSGISIAAV VGVSIGVALV LLTLIGVVVC CLKKRKKRLS TIGGGYVMPT PMESSSPRSD SALLKTQSSA PLVGNRSSNR
401: TYLSQSEPGG FGQSRELFSY EELVIATNGF SDENLLGEGG FGRVYKGVLP DERVVAVKQL KIGGGQGDRE FKAEVDTISR VHHRNLLSMV GYCISENRRL
501: LIYDYVPNNN LYFHLHAAGT PGLDWATRVK IAAGAARGLA YLHEDCHPRI IHRDIKSSNI LLENNFHALV SDFGLAKLAL DCNTHITTRV MGTFGYMAPE
601: YASSGKLTEK SDVFSFGVVL LELITGRKPV DASQPLGDES LVEWARPLLS NATETEEFTA LADPKLGRNY VGVEMFRMIE AAAACIRHSA TKRPRMSQIV
701: RAFDSLAEED LTNGMRLGES EIINSAQQSA EIRLFRRMAF GSQNYSTDSL TRNSYISKDE NL
Arabidopsis Description
PERK10Proline-rich receptor-like protein kinase PERK10 [Source:UniProtKB/Swiss-Prot;Acc:Q9C660]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.