Factsheet for PGSC0003DMT400041343

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g010030.2.1	Tomato	plastid	93.5	94.66
Os05t0100700-02	Rice	plasma membrane	24.49	68.82
Bra004022.1-P	Field mustard	plastid	34.24	65.04
GSMUA_Achr8P29720_001	Banana	mitochondrion	33.42	61.9
KRH07595	Soybean	plastid	44.25	61.47
TraesCS1B01G001500.1	Wheat	plastid	29.36	60.45
TraesCS3D01G005400.1	Wheat	cytosol	32.48	59.85
PGSC0003DMT400064597	Potato	plastid	58.59	58.12
PGSC0003DMT400019290	Potato	mitochondrion	54.4	57.76
VIT_01s0011g02460.t01	Wine grape	plastid	54.4	55.37
PGSC0003DMT400026193	Potato	plastid	49.8	53.96
KRH71097	Soybean	plastid	53.32	53.24
GSMUA_Achr1P25240_001	Banana	mitochondrion	34.37	53.03
GSMUA_Achr2P09600_001	Banana	plastid	47.09	52.97
KRH75567	Soybean	plastid	51.01	52.95
GSMUA_Achr4P24400_001	Banana	plastid	46.01	51.44
GSMUA_Achr2P14510_001	Banana	plastid	45.6	51.29
CDY59350	Canola	plastid	45.6	50.83
CDY07370	Canola	plastid	45.33	50.3
CDY04245	Canola	plastid	46.01	50.07
Zm00001d035774_P001	Maize	plastid	40.19	49.92
KXG32101	Sorghum	plastid	46.96	49.64
Zm00001d040127_P001	Maize	plasma membrane	46.41	49.64
AT1G68690.2	Thale cress	plastid	46.82	48.87
KXG20993	Sorghum	plastid	40.05	48.84
GSMUA_Achr10P...	Banana	plastid	47.09	48.54
Os01t0110500-01	Rice	plasma membrane	45.74	48.42
TraesCS3B01G008600.2	Wheat	plastid	44.93	48.4
AT1G26150.1	Thale cress	plastid	49.8	48.29
TraesCS3A01G003900.1	Wheat	plastid	44.79	48.18
CDX95997	Canola	plastid	47.77	48.09
HORVU3Hr1G000770.2	Barley	plastid	44.38	47.88
EES01447	Sorghum	plastid	43.57	47.7
Zm00001d012774_P001	Maize	cytosol, plastid	43.03	47.6
TraesCS3A01G278100.1	Wheat	plastid	43.3	47.41
Os01t0738300-01	Rice	cytosol	43.03	47.39
HORVU3Hr1G070200.1	Barley	plastid	43.17	47.26
TraesCS1D01G004300.1	Wheat	plastid	41.95	47.26
TraesCS3B01G312300.1	Wheat	plastid	43.17	47.12
Zm00001d008433_P007	Maize	plastid	46.28	46.85
TraesCS3D01G278400.1	Wheat	cytosol, plastid	42.76	46.75
Zm00001d043562_P008	Maize	cytosol	43.03	46.42
HORVU1Hr1G000090.3	Barley	plastid	41.41	46.36
CDY16146	Canola	plastid	50.2	44.33
PGSC0003DMT400038554	Potato	nucleus, plastid	29.23	43.72
Bra024725.1-P	Field mustard	plastid	46.82	42.25
Bra004331.1-P	Field mustard	plastid	48.44	41.34
PGSC0003DMT400040010	Potato	nucleus, plastid	35.86	41.21
PGSC0003DMT400001024	Potato	plastid	38.84	41.18
CDY38610	Canola	plastid	48.99	41.09
PGSC0003DMT400006515	Potato	plastid	30.85	38.78
PGSC0003DMT400045839	Potato	cytosol, plastid	38.16	38.74
PGSC0003DMT400037638	Potato	plastid	30.18	38.45
PGSC0003DMT400062758	Potato	nucleus	33.96	35.06
GSMUA_Achr8P13750_001	Banana	cytosol, nucleus, plastid	41.0	34.55
PGSC0003DMT400001868	Potato	nucleus, plastid	31.8	34.46
PGSC0003DMT400083900	Potato	cytosol, nucleus, peroxisome	22.73	28.77
PGSC0003DMT400006664	Potato	cytosol	25.17	25.24
PGSC0003DMT400024762	Potato	cytosol, plasma membrane, plastid	22.73	25.15
PGSC0003DMT400008513	Potato	cytosol, plasma membrane, plastid	20.03	23.09
PGSC0003DMT400008632	Potato	mitochondrion	20.57	21.23

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102595213	MapMan:18.4.1.22	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1BB86
PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400016012	PGSC:PGSC0003DMG400016012	EnsemblPlants:PGSC0003DMT400041343	PRINTS:PR01217	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF489	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI000296EB85	RefSeq:XP_006367529.1
SEG:seg	:	:	:	:	:

Description

ATP binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400016012]

Coordinates

chr00:-:23450972..23458446

Molecular Weight (calculated)

77821.7 Da

IEP (calculated)

8.875

GRAVY (calculated)

-0.443

Length

739 amino acids

Sequence
(BLAST)

001: MSIVSPPPSS STPFAAPPTA LNSPAPISQP NENSSSIASP QSAPLVATSP MPQSPPPPTN TTLPPPASSP QPQPPISTPT PPAESAPPII SPPPTPSGPP
101: ASSLAPPPSS SPPVSSPEPP SSSITSSPPP LPPRPEPTRP VSSPTPPSTR PPSLSPPHSS TRPPALSPPP PVQNPRTPPA PRSPGNPSPE PPKRSPPSSK
201: PPANAPPSKP PRNTPDSPAL VPPKNSPPSP AALPPINSAS SSSPPTNSSL PTPTAQSSPP QSTNGAQPSL TPPSPSFPSG NTTTSSNSSA VKSKDIGDGD
301: IGTGGSVAIG IILVFLLLGV VGAAGWCIWK QKKKNSGLSG GYILPTTLIS FPKSGSASLK FRESKPEIGN GAGSNIANTT GNTGGLGHSK PWFTYQELLE
401: ATNKFSERNL LGEGGFGSVY KGCLANGRDV AVKKLNIYGS QGEREFRSEV EIISRIHHRH LVSLVGYCIY ENGRLLVYDY VPNDTLYFHL HEQGRTVMDW
501: ATRVKIAVGA ARGIAYLHED CCPRIIHRDI KSPNILLDNN FDAQVADFGL AKLAQDAKSH VTTRVMGTFG YMAPEYASSG KLTEKSDVFS FGVVLLELIT
601: GRKSVDASQP LGEESLVEWA RPLLGNALEK GEFDQLTDPR LGNNYIDSEM FRMIEIAAAC VRHSAAKRPG MGQIMRAFDS MLMSDLTNGM KVGESAIYNS
701: AEQSAQIRLF RRMAFPSQDV NSDFSSQSTN YSRELSEHV

Best Arabidopsis Sequence Match ( AT1G70460.1 )
(BLAST)

001: MSDSPTSSPP APSADSAPPP DTSSDGSAAP PPTDSAPPPS PPADSSPPPA LPSLPPAVFS PPPTVSSPPP PPLDSSPPPP PDLTPPPSSP PPPDAPPPIP
101: IVFPPPIDSP PPESTNSPPP PEVFEPPPPP ADEDESPPAP PPPEQLPPPA SSPQGGPKKP KKHHPGPATS PPAPSAPATS PPAPPNAPPR NSSHALPPKS
201: TAAGGPLTSP SRGVPSSGNS VPPPANSGGG YQGKTMAGFA IAGFAVIALM AVVFLVRRKK KRNIDAYSDS QYLPPSNFSI KSDGFLYGQN PTKGYSGPGG
301: YNSQQQSNSG NSFGSQRGGG GYTRSGSAPD SAVMGSGQTH FTYEELTDIT EGFSKHNILG EGGFGCVYKG KLNDGKLVAV KQLKVGSGQG DREFKAEVEI
401: ISRVHHRHLV SLVGYCIADS ERLLIYEYVP NQTLEHHLHG KGRPVLEWAR RVRIAIGSAK GLAYLHEDCH PKIIHRDIKS ANILLDDEFE AQVADFGLAK
501: LNDSTQTHVS TRVMGTFGYL APEYAQSGKL TDRSDVFSFG VVLLELITGR KPVDQYQPLG EESLVEWARP LLHKAIETGD FSELVDRRLE KHYVENEVFR
601: MIETAAACVR HSGPKRPRMV QVVRALDSEG DMGDISNGNK VGQSSAYDSG QYNNDTMKFR KMAFGFDDSS DSGMYSGDYS VQDSRKGSNG ASSEFTRNET
701: ENRNFNNRRY

Arabidopsis Description

PERK13RHS10 [Source:UniProtKB/TrEMBL;Acc:A0A178WB53]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.