Factsheet for PGSC0003DMT400001024

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g007110.1.1	Tomato	nucleus	94.83	96.5
GSMUA_Achr5P06880_001	Banana	plastid	45.48	76.57
VIT_11s0016g03880.t01	Wine grape	plastid	67.86	72.77
GSMUA_Achr10P...	Banana	plastid	50.79	72.24
KRH48383	Soybean	mitochondrion	69.44	72.13
KRH39292	Soybean	plastid	68.58	71.99
GSMUA_Achr8P19800_001	Banana	cytosol	42.04	71.12
HORVU1Hr1G030140.2	Barley	plastid	61.26	70.11
TraesCS1D01G126300.1	Wheat	plastid	64.42	68.76
TraesCS1A01G127900.1	Wheat	plastid	64.71	68.54
GSMUA_Achr7P14360_001	Banana	plastid	53.23	68.45
TraesCS1B01G147000.2	Wheat	plastid	59.97	67.75
EES19240	Sorghum	cytosol, plasma membrane, plastid	56.38	67.53
Os05t0218400-01	Rice	plasma membrane	63.7	65.78
Zm00001d010421_P002	Maize	plasma membrane	63.99	65.68
OQU86081	Sorghum	plastid	55.52	62.42
Os01t0227200-01	Rice	plasma membrane	52.8	61.64
Zm00001d039311_P001	Maize	mitochondrion	54.38	61.13
HORVU3Hr1G030900.1	Barley	plastid	55.09	61.05
TraesCS3B01G179300.1	Wheat	plastid	55.09	60.86
TraesCS3D01G160000.1	Wheat	plastid	55.09	60.76
TraesCS3A01G152200.1	Wheat	plastid	54.66	60.48
GSMUA_Achr10P...	Banana	cytosol	51.36	59.67
Zm00001d037811_P001	Maize	plasma membrane	40.6	57.17
PGSC0003DMT400006515	Potato	plastid	46.05	54.59
PGSC0003DMT400038554	Potato	nucleus, plastid	37.45	52.83
PGSC0003DMT400040010	Potato	nucleus, plastid	47.92	51.94
PGSC0003DMT400037638	Potato	plastid	41.46	49.83
PGSC0003DMT400045839	Potato	cytosol, plastid	49.78	47.66
PGSC0003DMT400001868	Potato	nucleus, plastid	43.9	44.87
PGSC0003DMT400062758	Potato	nucleus	45.34	44.13
PGSC0003DMT400026193	Potato	plastid	42.9	43.84
PGSC0003DMT400019290	Potato	mitochondrion	39.31	39.37
PGSC0003DMT400064597	Potato	plastid	41.89	39.19
PGSC0003DMT400041343	Potato	plastid	41.18	38.84
PGSC0003DMT400083900	Potato	cytosol, nucleus, peroxisome	25.11	29.97
PGSC0003DMT400006664	Potato	cytosol	27.69	26.19
PGSC0003DMT400024762	Potato	cytosol, plasma membrane, plastid	23.82	24.85
PGSC0003DMT400008513	Potato	cytosol, plasma membrane, plastid	21.09	22.93
PGSC0003DMT400008632	Potato	mitochondrion	22.24	21.65

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102594132	MapMan:18.4.1.22	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	UniProt:M0ZHR3	PFAM:PF07714	EnsemblPlantsGene:PGSC0003DMG400000379	PGSC:PGSC0003DMG400000379	EnsemblPlants:PGSC0003DMT400001024
PRINTS:PR01217	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF89
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
TMHMM:TMhelix	UniParc:UPI0002951B04	RefSeq:XP_006353460.1	SEG:seg	:	:

Description

PERK1 kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400000379]

Coordinates

chr12:-:4478847..4483021

Molecular Weight (calculated)

73395.3 Da

IEP (calculated)

8.149

GRAVY (calculated)

-0.520

Length

697 amino acids

Sequence
(BLAST)

001: MSTPTPVTAP SPTSPPSNAT SPPPSTPATA PPPASPTPPA TAPPPASPTP PATTPPPSTP AQAPPPARTP TPPAATPPPA ASASPPPPTT PSPSSNPPPS
101: TTPTTPAPSG SPSPPSTTPS TPSPPGSTPS PPAGGNSPPS PSGGSPSPPS GGRPSPPALS PPPSDEGSSG ISTGVVVGIA IGGVLILAIL SLLFIFCKKK
201: KRRNHEPVNY YVPPPPPQGI KADPHGGQMQ HWQQNPPPPA DHFVTMPPKP SPPPAGGLLP SHAPPRAPSP QPQPYMNSSG ASSNYSGSEI ALPPPSPAMS
301: LGFSQSTFTY EELVRATDGF SDANLLGQGG FGYVHKGILP NGKEVAVKQL KAGSGQGERE FQAEVEIISR VHHKHLVSLV GYCITGAQRL LVYEFVPNNT
401: LEFHLHGKGR PPLDWRIRLK IALGSAKGLA YLHEDCQPKI IHRDIKAANI LIDFNFEAKV ADFGLAKLTS DVNTHVSTRV MGTFGYLAPE YASSGKLTDK
501: SDVFSFGVML LELITGRRPV DSTQSYIEDS LVDWARPLLT RALEDEKFDT LVDRRLENDY NHNEMARMVA CCAACVRHSA KRRPRMTQVL RALEGDVSLS
601: DLNEGIKPGH STVYSSYTSS DYDTLQYNED MKKFRKMALA TSQEYASSDQ YSNPTSEYGL NPSGSSSEGH QTAEMETGRM KKDSRGFSGS KGFSGTS

Best Arabidopsis Sequence Match ( AT4G34440.2 )
(BLAST)

001: MADSPVDSSP APETSNGTPP SNGTSPSNES SPPTPPSSPP PSSISAPPPD ISASFSPPPA PPTQETSPPT SPSSSPPVVA NPSPQTPENP SPPAPEGSTP
101: VTPPAPPQTP SNQSPERPTP PSPGANDDRN RTNGGNNNRD GSTPSPPSSG NRTSGDGGSP SPPRSISPPQ NSGDSDSSSG NHPQANIGLI IGVLVGAGLL
201: LLLAVCICIC CNRKKKKKSP QVNHMHYYNN NPYGGAPSGN GGYYKGTPQD HVVNMAGQGG GNWGPQQPVS GPHSDASNLT GRTAIPSPQA ATLGHNQSTF
301: TYDELSIATE GFAQSNLLGQ GGFGYVHKGV LPSGKEVAVK SLKLGSGQGE REFQAEVDII SRVHHRHLVS LVGYCISGGQ RLLVYEFIPN NTLEFHLHGK
401: GRPVLDWPTR VKIALGSARG LAYLHEDCHP RIIHRDIKAA NILLDFSFET KVADFGLAKL SQDNYTHVST RVMGTFGYLA PEYASSGKLS DKSDVFSFGV
501: MLLELITGRP PLDLTGEMED SLVDWARPLC LKAAQDGDYN QLADPRLELN YSHQEMVQMA SCAAAAIRHS ARRRPKMSQI VRALEGDMSM DDLSEGTRPG
601: QSTYLSPGSV SSEYDASSYT ADMKKFKKLA LENKEYQSSE YGGTSEYGLN PSASSSEEMN RGSMKRNPQL

Arabidopsis Description

PERK5PERK5 [Source:UniProtKB/TrEMBL;Acc:A0A178V2W8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.