Factsheet for TraesCS1B01G001500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS4A01G137900.1
TraesCS4B01G148100.1
TraesCS4D01G153300.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G38560.1	TraesCS4A01G137900.1	AT4G26630.1	25387881
AT5G38560.1	TraesCS4B01G148100.1	AT4G26630.1	25387881
AT5G38560.1	TraesCS4D01G153300.1	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0100700-02	Rice	plasma membrane	57.1	77.95
Solyc02g089750.2.1	Tomato	cytosol	30.36	62.29
VIT_14s0083g00330.t01	Wine grape	plasma membrane	68.25	56.19
Bra004022.1-P	Field mustard	plastid	60.17	55.53
TraesCS1D01G004300.1	Wheat	plastid	98.61	53.96
HORVU1Hr1G000090.3	Barley	plastid	97.77	53.18
Zm00001d035774_P001	Maize	plastid	82.17	49.58
KXG20993	Sorghum	plastid	80.5	47.69
TraesCS1B01G350100.1	Wheat	cytosol	49.58	39.47
TraesCS3B01G008600.2	Wheat	plastid	75.21	39.36
KRH07595	Soybean	plastid	56.82	38.35
GSMUA_Achr2P14510_001	Banana	plastid	67.97	37.14
GSMUA_Achr2P09600_001	Banana	plastid	65.46	35.77
GSMUA_Achr4P24400_001	Banana	plastid	64.9	35.25
PGSC0003DMT400026193	Potato	plastid	65.18	34.31
CDY59350	Canola	plastid	62.4	33.79
CDY01653	Canola	plastid	61.28	33.49
Bra028192.1-P	Field mustard	plastid	62.12	33.33
KRH45181	Soybean	plastid	67.13	33.29
CDX74517	Canola	plastid	61.56	33.28
AT5G38560.1	Thale cress	plastid	62.67	33.04
CDY07370	Canola	plastid	60.45	32.58
GSMUA_Achr10P...	Banana	plastid	64.62	32.36
KRH01485	Soybean	plastid	67.69	32.14
TraesCS4B01G233600.1	Wheat	nucleus, plastid	55.15	32.04
CDY04245	Canola	plastid	60.45	31.96
VIT_01s0011g02460.t01	Wine grape	plastid	64.62	31.96
TraesCS3B01G312300.1	Wheat	plastid	59.89	31.76
TraesCS5B01G415000.1	Wheat	plastid	53.76	31.48
TraesCS7B01G130400.2	Wheat	cytosol	66.85	31.41
TraesCS3B01G179300.1	Wheat	plastid	55.15	31.38
TraesCS1B01G147000.2	Wheat	plastid	53.76	31.28
AT1G68690.2	Thale cress	plastid	61.56	31.21
KRH75567	Soybean	plastid	61.28	30.9
KRH71097	Soybean	plastid	62.12	30.14
PGSC0003DMT400019290	Potato	mitochondrion	57.38	29.6
Solyc01g010030.2.1	Tomato	plastid	60.17	29.59
PGSC0003DMT400041343	Potato	plastid	60.45	29.36
AT1G26150.1	Thale cress	plastid	61.84	29.13
PGSC0003DMT400064597	Potato	plastid	59.89	28.86
TraesCS3B01G259100.1	Wheat	cytosol, plastid	55.99	28.8
Solyc05g010140.2.1	Tomato	plastid	59.61	28.53
CDX95997	Canola	plastid	57.94	28.34
Bra024725.1-P	Field mustard	plastid	61.84	27.11
TraesCS7B01G131000.1	Wheat	nucleus, plastid	56.82	27.09
CDY16146	Canola	plastid	61.56	26.4
Solyc04g006930.2.1	Tomato	plastid	55.43	24.88
Bra004331.1-P	Field mustard	plastid	59.05	24.48
CDY38610	Canola	plastid	59.61	24.29
TraesCS3B01G325100.2	Wheat	plastid	49.03	21.7
TraesCS3B01G245800.1	Wheat	mitochondrion, plasma membrane	41.23	19.76
TraesCS1B01G468900.1	Wheat	plastid	41.5	16.59
TraesCS3B01G440700.2	Wheat	mitochondrion	29.25	15.11

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF489	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
EnsemblPlantsGene:TraesCS1B01G001500	EnsemblPlants:TraesCS1B01G001500.1	TIGR:cd14066	:	:	:

Description

No Description!

Coordinates

chr1B:+:1416127..1418511

Molecular Weight (calculated)

39931.2 Da

IEP (calculated)

6.441

GRAVY (calculated)

-0.310

Length

359 amino acids

Sequence
(BLAST)

001: MSSSADPSVH TNYSAGSPRL KPCVSDMSVG NSRFFTYQEM YQITDGFSPR NLLGEGGFGS VYKGRLPEGK DVAVKQLRDG SGQGEREFQA EVEIISRVHH
101: RHLVSLVGYC IANSQRLLIY DFVSNDTLHY HLHGHPRIIH RDIKSSNILL DNNFDALVAD FGLARLALDA VTHVTTRVMG TFGYMAPEYA SSGKLTEKSD
201: VFSFGVVLLE LMTGRKPVDA SRPLGDESLV EWARPLLSRA LETGKLEELV DPRLERNFNE VEMFRMIESA AACIRHSSSK RPRMSQVVRV LDSLADIDLT
301: NGVQPGQSEL FNVANTADIR MFQQMVQGNQ DDSSAFSQYS WISRSRADAE ATSSNSRIL

Best Arabidopsis Sequence Match ( AT1G26150.1 )
(BLAST)

001: MTTPAQAPRE EVSLSPSLAS PPLMALPPPQ PSFPGDNATS PTREPTNGNP PETTNTPAQS SPPPETPLSS PPPEPSPPSP SLTGPPPTTI PVSPPPEPSP
101: PPPLPTEAPP PANPVSSPPP ESSPPPPPPT EAPPTTPITS PSPPTNPPPP PESPPSLPAP DPPSNPLPPP KLVPPSHSPP RHLPSPPASE IPPPPRHLPS
201: PPASERPSTP PSDSEHPSPP PPGHPKRREQ PPPPGSKRPT PSPPSPSDSK RPVHPSPPSP PEETLPPPKP SPDPLPSNSS SPPTLLPPSS VVSPPSPPRK
301: SVSGPDNPSP NNPTPVTDNS SSSGISIAAV VGVSIGVALV LLTLIGVVVC CLKKRKKRLS TIGGGYVMPT PMESSSPRSD SALLKTQSSA PLVGNRSSNR
401: TYLSQSEPGG FGQSRELFSY EELVIATNGF SDENLLGEGG FGRVYKGVLP DERVVAVKQL KIGGGQGDRE FKAEVDTISR VHHRNLLSMV GYCISENRRL
501: LIYDYVPNNN LYFHLHAAGT PGLDWATRVK IAAGAARGLA YLHEDCHPRI IHRDIKSSNI LLENNFHALV SDFGLAKLAL DCNTHITTRV MGTFGYMAPE
601: YASSGKLTEK SDVFSFGVVL LELITGRKPV DASQPLGDES LVEWARPLLS NATETEEFTA LADPKLGRNY VGVEMFRMIE AAAACIRHSA TKRPRMSQIV
701: RAFDSLAEED LTNGMRLGES EIINSAQQSA EIRLFRRMAF GSQNYSTDSL TRNSYISKDE NL

Arabidopsis Description

PERK10Proline-rich receptor-like protein kinase PERK10 [Source:UniProtKB/Swiss-Prot;Acc:Q9C660]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.