Factsheet for GSMUA_Achr7P26790_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
plasma membrane 1
mitochondrion 1
nucleus 1
peroxisome 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra034626.1-P	Field mustard	cytosol, nucleus, plastid	58.49	65.72
VIT_03s0063g02440.t01	Wine grape	plastid	63.53	65.48
GSMUA_Achr5P06880_001	Banana	plastid	61.47	64.73
Bra037558.1-P	Field mustard	cytosol	42.66	63.48
GSMUA_Achr8P19800_001	Banana	cytosol	57.34	60.68
VIT_04s0023g01570.t01	Wine grape	nucleus	61.47	59.29
Bra022359.1-P	Field mustard	plasma membrane	60.55	55.0
CDX92276	Canola	plasma membrane	60.55	55.0
GSMUA_Achr10P...	Banana	plastid	59.17	52.65
GSMUA_Achr8P29720_001	Banana	mitochondrion	46.33	50.63
GSMUA_Achr4P10790_001	Banana	plastid	72.71	49.76
GSMUA_Achr5P02090_001	Banana	nucleus	66.06	48.98
KXG39820	Sorghum	plastid	62.61	47.73
Zm00001d028337_P003	Maize	nucleus	63.53	47.51
Zm00001d030218_P003	Maize	plastid	60.32	47.22
GSMUA_Achr7P00830_001	Banana	plastid	65.83	46.74
EER91832	Sorghum	plastid	59.63	46.68
GSMUA_Achr4P03200_001	Banana	mitochondrion, plasma membrane	72.48	46.54
GSMUA_Achr7P14360_001	Banana	plastid	57.34	46.13
GSMUA_Achr4P32080_001	Banana	plastid	63.76	45.13
Os10t0104800-01	Rice	plastid	57.8	44.37
GSMUA_Achr10P...	Banana	cytosol	61.01	44.33
GSMUA_Achr1P25240_001	Banana	mitochondrion	48.39	44.05
TraesCS4B01G233600.1	Wheat	nucleus, plastid	60.55	42.72
KRH08293	Soybean	nucleus	58.49	42.57
TraesCS4A01G077500.1	Wheat	nucleus	60.55	42.51
Bra039607.1-P	Field mustard	nucleus	59.4	42.46
GSMUA_Achr7P14330_001	Banana	plasma membrane	42.43	42.33
AT2G18470.3	Thale cress	plastid	61.01	42.02
CDY65603	Canola	plastid	59.4	41.91
GSMUA_Achr10P...	Banana	plastid	52.75	41.82
Solyc10g051330.1.1	Tomato	nucleus	57.34	41.67
GSMUA_Achr7P14350_001	Banana	plasma membrane	43.35	41.63
KRH69932	Soybean	plastid	58.03	41.61
KRH60853	Soybean	cytosol, plastid	61.01	41.24
Solyc02g085430.2.1	Tomato	nucleus, plastid	56.42	40.33
KRH28656	Soybean	nucleus, plastid	58.26	40.19
CDX99312	Canola	nucleus, plastid	60.32	40.15
KRH76796	Soybean	nucleus, plastid	58.26	40.06
Bra018782.1-P	Field mustard	plastid	61.93	39.76
PGSC0003DMT400038554	Potato	nucleus, plastid	44.95	39.68
CDY48859	Canola	nucleus, plastid	62.16	39.56
CDX95494	Canola	nucleus, plastid	62.16	39.5
CDY48084	Canola	nucleus, plastid	62.16	39.5
CDX76282	Canola	nucleus, plastid	59.63	39.33
CDY18547	Canola	nucleus, plastid	61.7	39.27
CDY46249	Canola	nucleus, plastid	59.4	39.01
AT3G18810.1	Thale cress	nucleus, plastid	62.61	39.0
AT4G34440.1	Thale cress	plastid	59.17	38.51
AT1G49270.1	Thale cress	cytosol, plastid	61.47	38.34
PGSC0003DMT400001868	Potato	nucleus, plastid	59.86	38.27
CDY61983	Canola	cytosol, plastid	61.01	38.16
PGSC0003DMT400040010	Potato	nucleus, plastid	56.19	38.1
Bra001723.1-P	Field mustard	cytosol, plastid	60.78	37.86
Bra011534.1-P	Field mustard	nucleus, plastid	58.26	37.8
CDX75434	Canola	nucleus, plastid	58.26	37.8
Solyc01g109530.2.1	Tomato	nucleus	60.09	37.54
Solyc02g062790.2.1	Tomato	nucleus	55.96	37.31
CDX82325	Canola	cytosol, plastid	61.01	37.31
PGSC0003DMT400045839	Potato	cytosol, plastid	61.24	36.68
PGSC0003DMT400062758	Potato	nucleus	59.86	36.45
CDY71995	Canola	nucleus, plastid	35.55	36.22
Solyc11g044460.1.1	Tomato	nucleus	60.09	35.79
Solyc03g034060.2.1	Tomato	cytosol, plastid	60.55	35.48
CDY59546	Canola	plastid	35.32	35.32
CDX69059	Canola	endoplasmic reticulum, plasma membrane	57.8	35.29
GSMUA_Achr6P27340_001	Banana	cytosol, endoplasmic reticulum, plastid	42.2	35.25
GSMUA_Achr2P09600_001	Banana	plastid	51.83	34.4
HORVU4Hr1G065270.7	Barley	cytosol	38.76	34.35
GSMUA_Achr2P14510_001	Banana	plastid	50.46	33.49
GSMUA_Achr4P24400_001	Banana	plastid	48.17	31.77
GSMUA_Achr1P13940_001	Banana	plastid	50.92	31.44
GSMUA_Achr10P...	Banana	plastid	49.77	30.27
GSMUA_Achr3P15710_001	Banana	plastid	50.46	30.14
Bra037220.1-P	Field mustard	nucleus	60.09	28.6
CDY66134	Canola	nucleus	60.32	28.59
CDY51224	Canola	plastid	60.32	27.8
GSMUA_Achr6P18630_001	Banana	cytosol, nucleus, plasma membrane	28.44	23.09
GSMUA_Achr1P04890_001	Banana	cytosol	35.78	22.0
GSMUA_Achr6P26510_001	Banana	cytosol	36.01	21.93
GSMUA_Achr9P05910_001	Banana	plasma membrane	36.24	21.44
GSMUA_Achr8P04820_001	Banana	cytosol, plasma membrane, plastid	33.72	19.47
GSMUA_Achr8P13750_001	Banana	cytosol, nucleus, plastid	37.39	18.59
GSMUA_Achr5P07770_001	Banana	cytosol	30.5	17.69

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.22	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSMUA_Achr7G26790_001	EnsemblPlants:GSMUA_Achr7P26790_001	EnsemblPlants:GSMUA_Achr7T26790_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0TL15
PFAM:PF07714	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF89
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
UniParc:UPI000295F2E0	SEG:seg	:	:	:	:

Description

retrotransposon protein, putative, unclassified, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr7G26790_001]

Coordinates

chr7:+:28005286..28009056

Molecular Weight (calculated)

47654.2 Da

IEP (calculated)

6.510

GRAVY (calculated)

-0.271

Length

436 amino acids

Sequence
(BLAST)

001: MMQSIEERIR SFLSAAVTAS VTAVAPASSM MSNSDISSAY SGPHVSSPST PSPNISLGFN KNHFSYEELS AATNGFSRDH ILGQGGFGCV YKGVLPNGKE
101: VAVKQLKSGS GQGEREFQAE VEIISRVHHR HLVSLVGYCI AGSQRMLVYD FVRNKTLEFH LHGKGLPTMD WPTRLKIAIG SAKGLSYLHE DCHPRIIHRD
201: IKTANILLDN NFEAMVADFG LAKIFSDTNT HVSTRIMGTI GYLAPEYAST GKLTEKSDVF SYGVMLLELI TGRRPIDDSD TFMVDSLVDW ARPLLAQALA
301: DDKFDELADP RLENSYDTVE MVRMVACAAA CVRHSAKGRP MMSQIVRALD GDVSLEILNE GSKRGQSTTF SSSSDYDASL YSSNMKHFRT VALESNDYSN
401: GYSGATSEYG LNPSETSSSG DVISPDSPKK HSYHRL

Best Arabidopsis Sequence Match ( AT2G18470.1 )
(BLAST)

001: MASSPESAPP TNSTSSPSPP SNTNSTTSSP PAPSPPSPTP PQGDSSSSPP PDSTSPPAPQ APNPPNSSNN SPSPPSQGGG GERGNGGNNG GNDTPPSRGS
101: PPSPPSRSNG DNGGSRSSPP GDTGGSRSDN PPSSGGSSGG GGGGRSNTNT AIIVGVLVGA GLLMIVLIIV CLRRKKKRKD SFYPEPMKGN QYQYYGNNNN
201: NNASQNYPNW HLNSQGQNQQ STGGWGGGGP SPPPPPRMPT SGEDSSMYSG PSRPVLPPPS PALALGFNKS TFTYQELAAA TGGFTDANLL GQGGFGYVHK
301: GVLPSGKEVA VKSLKAGSGQ GEREFQAEVD IISRVHHRYL VSLVGYCIAD GQRMLVYEFV PNKTLEYHLH GKNLPVMEFS TRLRIALGAA KGLAYLHEDC
401: HPRIIHRDIK SANILLDFNF DAMVADFGLA KLTSDNNTHV STRVMGTFGY LAPEYASSGK LTEKSDVFSY GVMLLELITG KRPVDNSITM DDTLVDWARP
501: LMARALEDGN FNELADARLE GNYNPQEMAR MVTCAAASIR HSGRKRPKMS QIVRALEGEV SLDALNEGVK PGHSNVYGSL GASSDYSQTS YNADMKKFRQ
601: IALSSQEFPV SDCEGTSSND SRDMGTKSPT PPK

Arabidopsis Description

PERK4Proline-rich receptor-like protein kinase PERK4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZNQ8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.