CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY71995	Canola	nucleus, plastid	97.02	98.83
CDY65603	Canola	plastid	99.31	70.06
Bra039607.1-P	Field mustard	nucleus	97.02	69.34
AT2G18470.3	Thale cress	plastid	87.16	60.03
PGSC0003DMT400038554	Potato	nucleus, plastid	47.25	41.7
CDY66134	Canola	nucleus	86.01	40.76
CDY51224	Canola	plastid	88.3	40.7
VIT_04s0023g01570.t01	Wine grape	nucleus	41.51	40.04
CDX92276	Canola	plasma membrane	41.28	37.5
GSMUA_Achr5P02090_001	Banana	nucleus	49.77	36.9
Zm00001d030218_P003	Maize	plastid	46.1	36.09
CDX75275	Canola	cytosol	29.13	36.08
KRH28656	Soybean	nucleus, plastid	52.29	36.08
KRH76796	Soybean	nucleus, plastid	52.29	35.96
GSMUA_Achr4P32080_001	Banana	plastid	50.69	35.88
HORVU0Hr1G013830.4	Barley	plastid	46.1	35.51
Os10t0104800-01	Rice	plastid	46.1	35.39
EER91832	Sorghum	plastid	45.18	35.37
GSMUA_Achr7P26790_001	Banana	plastid	35.32	35.32
GSMUA_Achr7P00830_001	Banana	plastid	49.54	35.18
TraesCS5A01G411300.1	Wheat	plastid	46.1	35.08
Zm00001d028337_P003	Maize	nucleus	45.87	34.31
Solyc02g085430.2.1	Tomato	nucleus, plastid	47.25	33.77
TraesCS4B01G233600.1	Wheat	nucleus, plastid	47.71	33.66
KXG39820	Sorghum	plastid	44.04	33.57
TraesCS4A01G077500.1	Wheat	nucleus	47.71	33.49
PGSC0003DMT400040010	Potato	nucleus, plastid	49.31	33.44
Zm00001d034257_P002	Maize	plastid	44.72	33.28
CDY48859	Canola	nucleus, plastid	52.06	33.14
EER90803	Sorghum	plastid	45.64	33.0
GSMUA_Achr4P03200_001	Banana	mitochondrion, plasma membrane	51.38	32.99
CDX95494	Canola	nucleus, plastid	51.83	32.94
CDY48084	Canola	nucleus, plastid	51.83	32.94
CDY46249	Canola	nucleus, plastid	50.0	32.83
GSMUA_Achr4P10790_001	Banana	plastid	47.94	32.81
CDY18547	Canola	nucleus, plastid	51.38	32.7
CDX76282	Canola	nucleus, plastid	49.54	32.68
CDY39543	Canola	plastid	48.62	32.67
CDX75434	Canola	nucleus, plastid	50.23	32.59
Solyc02g062790.2.1	Tomato	nucleus	48.85	32.57
CDY61983	Canola	cytosol, plastid	52.06	32.57
EER97954	Sorghum	plastid	42.66	32.52
CDX77417	Canola	plastid	48.39	32.46
HORVU2Hr1G061030.8	Barley	plastid	39.45	32.27
TraesCS5B01G415000.1	Wheat	plastid	44.72	31.81
Os07t0137800-00	Rice	plasma membrane	39.22	31.78
KRH69932	Soybean	plastid	44.27	31.74
KRH08293	Soybean	nucleus	43.58	31.72
CDX82325	Canola	cytosol, plastid	51.83	31.7
CDX99312	Canola	nucleus, plastid	47.02	31.3
Zm00001d007848_P001	Maize	mitochondrion, plastid	42.43	30.43
PGSC0003DMT400045839	Potato	cytosol, plastid	50.0	29.95
CDX69059	Canola	endoplasmic reticulum, plasma membrane	48.85	29.83
CDY02546	Canola	plastid	35.09	29.82
CDY47531	Canola	plastid	35.09	29.59
Solyc03g034060.2.1	Tomato	cytosol, plastid	49.77	29.17
CDX74517	Canola	plastid	39.68	26.05
CDY01653	Canola	plastid	39.22	26.03
CDX91719	Canola	plastid	40.14	25.96
CDY41442	Canola	plastid	38.99	25.8
CDY03749	Canola	plastid	39.22	25.45
CDY09439	Canola	plastid	39.68	25.33
CDY44156	Canola	nucleus	40.6	24.86
CDX68882	Canola	plastid	39.45	24.47
CDY48706	Canola	cytosol	29.59	24.43
CDX93398	Canola	cytosol	38.76	23.64
CDY51639	Canola	nucleus	37.84	23.5
CDY11592	Canola	plastid	39.45	23.4
CDY37963	Canola	cytosol	38.53	23.3
CDY20960	Canola	cytosol	38.76	23.21
CDY04245	Canola	plastid	35.78	22.98
CDY59350	Canola	plastid	34.86	22.93
CDY47133	Canola	cytosol, plastid	39.45	22.87
CDY07370	Canola	plastid	34.86	22.82
CDY20615	Canola	cytosol	37.84	22.7
CDX95997	Canola	plastid	35.78	21.25
CDY46900	Canola	plasma membrane	33.26	19.62
CDY16146	Canola	plastid	37.16	19.35
CDY38610	Canola	plastid	36.47	18.05
CDX75728	Canola	cytosol	23.85	17.33
CDY10586	Canola	cytosol, nucleus, plasma membrane	23.62	17.05
CDY48704	Canola	cytosol, mitochondrion, plasma membrane, plastid	15.14	17.01
CDY02454	Canola	cytosol, nucleus, plasma membrane	23.39	16.89
CDY32884	Canola	plasma membrane	23.62	16.67
CDX82522	Canola	cytosol	24.08	15.98
CDY20711	Canola	cytosol, plasma membrane, plastid	23.62	15.56
CDY32758	Canola	plasma membrane	23.62	15.49
CDY23630	Canola	cytosol	25.46	14.98
CDX97507	Canola	cytosol, mitochondrion, nucleus	25.46	14.86
CDY51732	Canola	cytosol	25.23	14.63
CDY55134	Canola	cytosol	25.23	14.63
HORVU4Hr1G065270.7	Barley	cytosol	15.83	14.02
CDY32921	Canola	plasma membrane	20.18	11.73
CDY32757	Canola	plasma membrane	14.22	8.74

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:50.2.7	GO:A0A078J879	UniProt:A0A078J879	EnsemblPlants:CDY59546
ProteinID:CDY59546	ProteinID:CDY59546.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00027358001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF07714
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF285	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix
UniParc:UPI0004EEFB78	SEG:seg	:	:	:	:

Description

BnaCnng35230DBnaCnng35230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J879]

Coordinates

chrLK033775:+:45917..47578

Molecular Weight (calculated)

45283.4 Da

IEP (calculated)

9.339

GRAVY (calculated)

-0.623

Length

436 amino acids

Sequence
(BLAST)

001: MASSPESSPP SNSSSSPSPP SNSSSTSSTP PSPPSPTQGD SSSPPPDSSS PPAPQAPSPP SSSNNTPPSP ASQGGGGNGG GNQSPPSRGS PPSRGGDNSG
101: SRSSPSGNNG GSRSDNSPSG GSGGGGGGGG NNTNTAIIIG VLVGAGLLMI VLIIVCLRRK KKRKDSFYPE SMKGNQYQYY GNNNNNNNNS SQNYPNWHLN
201: SQGQNQQPPN SWGGGGPSLP PPQQMPTSGD ASSLYSGPAR RVLPPPPPTL ALGFNKSTFT YQELAAVTGG FADSNLLGQG GFGYVHKGVL SSGKEVAVKS
301: LKSGSGQGER EFQAEVDIIS RVHHRYLVSL VGYCIADAQR MLVYEFVPNN TLEYHLHGKN LPVMDFSTRM RIALGAGKGL AYLHEDCHPR IIHRDIKSAN
401: ILLDFNFDAM VADFGLAKLT SDNYTHVSTR VMGTFG

Best Arabidopsis Sequence Match ( AT2G18470.4 )
(BLAST)

001: MASSPESAPP TNSTSSPSPP SNTNSTTSSP PAPSPPSPTP PQGDSSSSPP PDSTSPPAPQ APNPPNSSNN SPSPPSQGGG GERGNGGNNG GNDTPPSRGS
101: PPSPPSRSNG DNGGSRSSPP GDTGGSRSDN PPSSGGSSGG GGGGRSNTNT AIIVGVLVGA GLLMIVLIIV CLRRKKKRKD SFYPEPMKGN QYQYYGNNNN
201: NNASQNYPNW HLNSQGQNQQ STGGWGGGGP SPPPPPRMPT SGEDSSMYSG PSRPVLPPPS PALALGFNKS TFTYQELAAA TGGFTDANLL GQGGFGYVHK
301: GVLPSGKEVA VKSLKAGSGQ GEREFQAEVD IISRVHHRYL VSLVGYCIAD GQRMLVYEFV PNKTLEYHLH GKNLPVMEFS TRLRIALGAA KGLAYLHEDC
401: HPRIIHRDIK SANILLDFNF DAMVADFGLA KLTSDNNTHV STRVMGTFGY LAPEYASSGK LTEKSDVFSY GVMLLELITG KRPVDNSITM DDTLVDWVFM
501: HVTYVSCIYV FRLFRVLMIM NTGSASYGSR ARRWKL

Arabidopsis Description

PERK4Proline-rich receptor-like protein kinase PERK4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZNQ8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.