CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1
nucleus 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034257_P002	Maize	plastid	84.25	86.69
HORVU0Hr1G013830.4	Barley	plastid	67.5	71.91
TraesCS5A01G411300.1	Wheat	plastid	67.66	71.2
TraesCS5B01G415000.1	Wheat	plastid	68.33	67.21
VIT_03s0063g02440.t01	Wine grape	plastid	44.44	63.36
Bra034626.1-P	Field mustard	cytosol, nucleus, plastid	40.46	62.89
Bra037558.1-P	Field mustard	cytosol	30.02	61.77
VIT_04s0023g01570.t01	Wine grape	nucleus	45.77	61.06
GSMUA_Achr5P02090_001	Banana	nucleus	56.72	58.16
Bra022359.1-P	Field mustard	plasma membrane	46.27	58.12
CDX92276	Canola	plasma membrane	46.27	58.12
GSMUA_Achr7P00830_001	Banana	plastid	58.37	57.33
GSMUA_Achr4P32080_001	Banana	plastid	55.06	53.9
KXG39820	Sorghum	plastid	50.91	53.67
EER97954	Sorghum	plastid	49.92	52.62
EER91832	Sorghum	plastid	47.43	51.35
Bra039607.1-P	Field mustard	nucleus	49.92	49.34
CDY65603	Canola	plastid	50.25	49.03
AT2G18470.3	Thale cress	plastid	51.41	48.97
EES19240	Sorghum	cytosol, plasma membrane, plastid	47.26	48.97
KRH76796	Soybean	nucleus, plastid	51.24	48.74
KRH28656	Soybean	nucleus, plastid	50.08	47.78
CDY71995	Canola	nucleus, plastid	32.84	46.26
KRH08293	Soybean	nucleus	45.61	45.91
OQU86081	Sorghum	plastid	47.1	45.81
CDY59546	Canola	plastid	33.0	45.64
PGSC0003DMT400038554	Potato	nucleus, plastid	37.31	45.55
KRH60853	Soybean	cytosol, plastid	48.59	45.43
CDX99312	Canola	nucleus, plastid	49.09	45.19
CDX76282	Canola	nucleus, plastid	49.42	45.08
Bra011534.1-P	Field mustard	nucleus, plastid	50.08	44.94
CDX75434	Canola	nucleus, plastid	50.08	44.94
CDY46249	Canola	nucleus, plastid	49.42	44.88
CDY48859	Canola	nucleus, plastid	50.91	44.82
Bra018782.1-P	Field mustard	plastid	50.41	44.77
CDY61983	Canola	cytosol, plastid	51.74	44.76
PGSC0003DMT400040010	Potato	nucleus, plastid	47.6	44.63
CDY48084	Canola	nucleus, plastid	50.75	44.61
KRH69932	Soybean	plastid	44.94	44.57
Bra001723.1-P	Field mustard	cytosol, plastid	51.58	44.43
CDX95494	Canola	nucleus, plastid	50.41	44.31
AT4G34440.1	Thale cress	plastid	49.09	44.18
CDX82325	Canola	cytosol, plastid	51.91	43.9
CDY18547	Canola	nucleus, plastid	49.75	43.8
AT1G49270.1	Thale cress	cytosol, plastid	50.41	43.49
Solyc02g085430.2.1	Tomato	nucleus, plastid	43.95	43.44
AT3G18810.1	Thale cress	nucleus, plastid	50.25	43.29
Solyc02g062790.2.1	Tomato	nucleus	46.93	43.27
Solyc10g051330.1.1	Tomato	nucleus	42.79	43.0
PGSC0003DMT400001868	Potato	nucleus, plastid	47.6	42.08
CDX69059	Canola	endoplasmic reticulum, plasma membrane	49.09	41.46
PGSC0003DMT400062758	Potato	nucleus	48.92	41.2
Solyc01g109530.2.1	Tomato	nucleus	47.43	40.97
PGSC0003DMT400045839	Potato	cytosol, plastid	49.42	40.93
Solyc03g034060.2.1	Tomato	cytosol, plastid	50.25	40.73
Solyc11g044460.1.1	Tomato	nucleus	49.09	40.44
KXG39708	Sorghum	plastid	35.82	38.1
KXG20993	Sorghum	plastid	37.98	37.79
KXG33373	Sorghum	plastid	41.29	35.02
KXG32962	Sorghum	plastid	40.46	34.91
KXG32101	Sorghum	plastid	39.97	34.48
EES01447	Sorghum	plastid	38.14	34.07
KXG19971	Sorghum	plastid	39.3	33.19
Bra037220.1-P	Field mustard	nucleus	49.92	32.86
CDY66134	Canola	nucleus	49.75	32.61
CDY51224	Canola	plastid	50.25	32.03
KXG22354	Sorghum	plastid	43.12	23.55
EES18801	Sorghum	cytosol	28.03	23.15
EES01025	Sorghum	plasma membrane	28.19	22.7
KXG33822	Sorghum	mitochondrion	21.89	19.3

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.22	Gene3D:3.30.200.20	EntrezGene:8084167	UniProt:C5WZ44	EnsemblPlants:EER90803
ProteinID:EER90803	ProteinID:EER90803.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF07714	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF16	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	EnsemblPlantsGene:SORBI_3001G071700
SUPFAM:SSF56112	unigene:Sbi.19804	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI0001A82276
RefSeq:XP_002463805.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:5458789..5462110

Molecular Weight (calculated)

63234.3 Da

IEP (calculated)

9.296

GRAVY (calculated)

-0.385

Length

603 amino acids

Sequence
(BLAST)

001: MSSNSSTASP PRPAPSPPPK SSSSSPSHST APPPSADSTS PPQPPPRASS SPAPSRPSDS SPPPAASRSH GAQSSSPAKP HSPPAAPAHR GGPTMLEIVF
101: AAAGAAALLV ILIAACVCCS RKTAPRRRKR PHNPMHYYAD SSSSVCKGNS STYYPSGPQP QWQSDTGAAA ATVSSFDPPG GGWQWHAAPP PAMTSGAYSS
201: PHGAPPPPPP HEALGLGKGT FSYEELAVAT GNFSAANLLG QGGFGYVHKG VLPGGMVVAV KQLKSDSGQG EREFQAEVDI ISRVHHRHLV SLVGHCIAGA
301: RRVLVYQFVP NKTLEFHLHG KGQPVMEWST RLRIALGSAK GLAYLHEDCH PRIIHRDIKS ANILLDNNFE AKVADFGLAK LTSDNNTHVS TRVMGTFGYL
401: APEYASSGKL TDKSDVFSYG VMLLELLTGR RPIDDAGSGS GSGSAQAHPF LDDSLVDWAR PALSRALADG DYDAVADPRL RGNYDPVEMA RMVASAAAAV
501: RHSAKKRPKM SQIVRALEGD ISLEDLNEGV RPGQSMAFGT AVAASYKAKA PGPYTSDMER IRQAPMASPV YSGAAIEFGR PSTIASEGSF SDDLSPVKGQ
601: PHR

Best Arabidopsis Sequence Match ( AT2G18470.1 )
(BLAST)

001: MASSPESAPP TNSTSSPSPP SNTNSTTSSP PAPSPPSPTP PQGDSSSSPP PDSTSPPAPQ APNPPNSSNN SPSPPSQGGG GERGNGGNNG GNDTPPSRGS
101: PPSPPSRSNG DNGGSRSSPP GDTGGSRSDN PPSSGGSSGG GGGGRSNTNT AIIVGVLVGA GLLMIVLIIV CLRRKKKRKD SFYPEPMKGN QYQYYGNNNN
201: NNASQNYPNW HLNSQGQNQQ STGGWGGGGP SPPPPPRMPT SGEDSSMYSG PSRPVLPPPS PALALGFNKS TFTYQELAAA TGGFTDANLL GQGGFGYVHK
301: GVLPSGKEVA VKSLKAGSGQ GEREFQAEVD IISRVHHRYL VSLVGYCIAD GQRMLVYEFV PNKTLEYHLH GKNLPVMEFS TRLRIALGAA KGLAYLHEDC
401: HPRIIHRDIK SANILLDFNF DAMVADFGLA KLTSDNNTHV STRVMGTFGY LAPEYASSGK LTEKSDVFSY GVMLLELITG KRPVDNSITM DDTLVDWARP
501: LMARALEDGN FNELADARLE GNYNPQEMAR MVTCAAASIR HSGRKRPKMS QIVRALEGEV SLDALNEGVK PGHSNVYGSL GASSDYSQTS YNADMKKFRQ
601: IALSSQEFPV SDCEGTSSND SRDMGTKSPT PPK

Arabidopsis Description

PERK4Proline-rich receptor-like protein kinase PERK4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZNQ8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.