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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra018431.1-P Field mustard cytosol 95.6 97.89
CDY20615 Canola cytosol 96.7 96.84
CDY37963 Canola cytosol 81.18 81.97
CDX93398 Canola cytosol 80.49 81.96
AT1G10620.1 Thale cress cytosol 77.61 78.69
CDX75275 Canola cytosol 26.24 54.26
CDY41442 Canola plastid 46.02 50.83
CDY03749 Canola plastid 46.57 50.45
CDX91719 Canola plastid 46.43 50.15
CDY09439 Canola plastid 45.88 48.9
GSMUA_Achr6P27340_001 Banana cytosol, endoplasmic reticulum, plastid 34.48 48.08
VIT_01s0127g00670.t01 Wine grape plastid 44.23 47.92
CDY44156 Canola nucleus 46.02 47.05
CDY11592 Canola plastid 46.43 45.99
KRG99346 Soybean plastid 39.15 45.82
CDY51639 Canola nucleus 43.82 45.44
CDX92276 Canola plasma membrane 29.95 45.42
KRH74591 Soybean nucleus, plastid 42.72 45.34
KRH69571 Soybean nucleus, plastid 42.31 45.29
CDY47133 Canola cytosol, plastid 46.57 45.08
CDY01653 Canola plastid 40.11 44.44
CDX74517 Canola plastid 40.25 44.13
GSMUA_Achr1P13940_001 Banana plastid 41.76 43.06
CDY02546 Canola plastid 30.22 42.88
CDY47531 Canola plastid 30.22 42.55
Os03t0568800-01 Rice cytosol, nucleus, plastid 39.15 42.22
KXG32962 Sorghum plastid 40.52 42.2
KRH45666 Soybean cytosol, nucleus, plastid 41.35 41.92
TraesCS3B01G259100.1 Wheat cytosol, plastid 39.97 41.69
CDY04245 Canola plastid 38.87 41.68
HORVU3Hr1G057190.2 Barley plastid 39.56 41.44
Zm00001d011450_P001 Maize plastid 38.87 41.43
CDY07370 Canola plastid 37.64 41.14
Os06t0486000-01 Rice plasma membrane 41.62 40.51
CDY39543 Canola plastid 35.71 40.06
CDY59350 Canola plastid 36.4 39.97
CDY65603 Canola plastid 33.93 39.97
TraesCS3A01G229800.1 Wheat plastid 39.42 39.86
CDX77417 Canola plastid 35.3 39.54
CDX95997 Canola plastid 39.84 39.51
CDY71995 Canola nucleus, plastid 22.94 39.02
CDY59546 Canola plastid 23.21 38.76
CDY46249 Canola nucleus, plastid 35.16 38.55
CDX76282 Canola nucleus, plastid 34.89 38.43
CDX75434 Canola nucleus, plastid 35.16 38.1
TraesCS7D01G232700.1 Wheat nucleus, plastid 39.15 37.95
TraesCS7B01G131000.1 Wheat nucleus, plastid 39.15 37.85
CDY48084 Canola nucleus, plastid 35.16 37.32
CDX95494 Canola nucleus, plastid 35.03 37.17
CDY48859 Canola nucleus, plastid 34.75 36.93
CDY48706 Canola cytosol 26.79 36.93
CDY18547 Canola nucleus, plastid 34.48 36.64
Zm00001d037066_P008 Maize plastid 37.64 36.34
CDY61983 Canola cytosol, plastid 34.62 36.15
CDX99312 Canola nucleus, plastid 32.42 36.03
CDX69059 Canola endoplasmic reticulum, plasma membrane 34.89 35.57
CDX82325 Canola cytosol, plastid 34.62 35.34
CDY16146 Canola plastid 39.97 34.77
CDX68882 Canola plastid 32.83 34.0
CDY38610 Canola plastid 40.38 33.37
CDY10586 Canola cytosol, nucleus, plasma membrane 22.8 27.48
CDY02454 Canola cytosol, nucleus, plasma membrane 22.53 27.15
CDX75728 Canola cytosol 22.25 27.0
CDY66134 Canola nucleus 33.52 26.52
CDY46900 Canola plasma membrane 26.51 26.12
CDY32758 Canola plasma membrane 23.76 26.02
CDY51224 Canola plastid 33.65 25.9
HORVU7Hr1G047750.6 Barley plastid 27.88 25.76
CDY20711 Canola cytosol, plasma membrane, plastid 23.08 25.38
CDX82522 Canola cytosol 22.39 24.81
CDY32884 Canola plasma membrane 20.33 23.95
CDY23630 Canola cytosol 23.49 23.08
CDY51732 Canola cytosol 23.49 22.74
CDY55134 Canola cytosol 23.49 22.74
CDX97507 Canola cytosol, mitochondrion, nucleus 23.21 22.62
CDY32921 Canola plasma membrane 20.88 20.27
CDY32757 Canola plasma membrane 17.45 17.91
CDY48704 Canola cytosol, mitochondrion, plasma membrane, plastid 7.28 13.66
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.22Gene3D:3.30.200.20GO:A0A078G392UniProt:A0A078G392EnsemblPlants:CDY20960
ProteinID:CDY20960ProteinID:CDY20960.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006464GO:GO:0006468
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016301
GO:GO:0016310GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00015107001InterPro:IPR000719InterPro:Kinase-like_dom_sf
PFAM:PF07714ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27001PANTHER:PTHR27001:SF36
InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_AS
TMHMM:TMhelixUniParc:UPI0004EE791FSEG:seg:::
Description
BnaA08g25650DBnaA08g25650D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G392]
Coordinates
chrLK032115:-:79498..82746
Molecular Weight (calculated)
77884.8 Da
IEP (calculated)
7.071
GRAVY (calculated)
-0.566
Length
728 amino acids
Sequence
(BLAST)
001: MDKVQEQAEL IEKKLTPFVA SQPTTVVIGG GLADQKTTGG ESTDQKTTGG GLADQKTTGG SQTTQPPTTS PPSPPSPDSG GGGGGGSQSS PPPVLTLSPP
101: PSNQSVNTTS PPTPPSSPPP SITPPPSPPQ PQTPPQSTPA GNSPVVIPSP TPQIQLPLTP PTFVTQQPTV NGLALPNNPI FNPSPPSTPL SPPSPENSGS
201: QGSPPSPPPL DSPPAAGGSN HVPSSSPPSL SGSDNNSGGS NRHNANGNGN GGSGQQKNDS NYTEKTMIGI GIAGVLVIIF VAAIFFIRRK QNKSSSPRSN
301: QNYLPPANVS VNTDGFVNYR QKPGNGNISA QNSSPDTNNS LGNQKPGRST TPDSAVLGNS KTIFTFEELS QITEGFCKRY VIGEGGFGYV YKGIICDGKS
401: IAIKQLKSIS AEGYREFKAE VEIISRVHHR HLVSLVGYCI SEQHRFLIYE FVPNNTLDHH LHGKDLPVLE WTKRVKIAVG AAKGLAYLHE DCHPKIIHRD
501: IKSSNILLDN EFEAQAISLQ VADFGLARLN DTAQSHISTR VMGTFGYLAP EYASSGKLTD RSDVFSFGVV LLELITGRKP VDTSQPLGEE SLVEWARPRF
601: IEAIEKGDIS EVVDPRLEKH YIEGEVYRMI ETAASCVRHS ALKRPRMVQV VRALDTRDDM SDLSNGVKVG QSTVYNSGQY SNEIRMFRRA SEDSTDYGYG
701: SSNGYYTSQD FTSRESERAF NTSRRTNY
Best Arabidopsis Sequence Match ( AT1G10620.1 )
(BLAST)
001: MDKVQQQADL FGKTISPFVA SQPTNVGGFT DQKIIGGSET TQPPATSPPS PPSPDTQTSP PPATAAQPPP NQPPNTTPPP TPPSSPPPSI TPPPSPPQPQ
101: PPPQSTPTGD SPVVIPFPKP QLPPPSLFPP PSLVNQLPDP RPNDNNILEP INNPISLPSP PSTPFSPPSQ ENSGSQGSPP LSSLLPPMLP LNPNSPGNPL
201: QPLDSPLGGE SNRVPSSSSS PSPPSLSGSN NHSGGSNRHN ANSNGDGGTS QQSNESNYTE KTVIGIGIAG VLVILFIAGV FFVRRKQKKG SSSPRSNQYL
301: PPANVSVNTE GFIHYRQKPG NGNSSAQNSS PDTNSLGNPK HGRGTPDSAV IGTSKIHFTY EELSQITEGF CKSFVVGEGG FGCVYKGILF EGKPVAIKQL
401: KSVSAEGYRE FKAEVEIISR VHHRHLVSLV GYCISEQHRF LIYEFVPNNT LDYHLHGKNL PVLEWSRRVR IAIGAAKGLA YLHEDCHPKI IHRDIKSSNI
501: LLDDEFEAQV ADFGLARLND TAQSHISTRV MGTFGYLAPE YASSGKLTDR SDVFSFGVVL LELITGRKPV DTSQPLGEES LVEWARPRLI EAIEKGDISE
601: VVDPRLENDY VESEVYKMIE TAASCVRHSA LKRPRMVQVV RALDTRDDLS DLTNGVKVGQ SRVYDSGQYS NEIRIFRRAS EDSSDLGTNT GYYPSQDYAT
701: SHEYESESRA FNTSHRNH
Arabidopsis Description
PERK11PERK11 [Source:UniProtKB/TrEMBL;Acc:A0A178W8M0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.