Factsheet for Os03t0417800-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1
nucleus 1
mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	plastid

extracellular: 18372294

msms PMID: 18372294 doi

T Aki, M Shigyo, R Nakano, T Yoneyama, S Yanagisawa

Department of Applied Biological Chemistry, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, 113-8657 Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G032830.1	Barley	plastid	66.38	77.0
TraesCS2D01G183100.1	Wheat	cytosol, mitochondrion, plastid	65.52	76.0
Os12t0502000-01	Rice	cytosol, mitochondrion, nucleus, plastid	58.62	67.33
Os11t0629400-01	Rice	extracellular	62.07	62.61
Zm00001d047282_P001	Maize	mitochondrion	65.52	53.15
Zm00001d029527_P003	Maize	cytosol	67.24	42.62
Zm00001d040773_P001	Maize	plastid	48.28	37.58
KXG39652	Sorghum	mitochondrion	66.38	34.68

Protein Annotations

EMBL:AK121654	EnsemblPlants:Os03t0417800-01	EnsemblPlantsGene:Os03g0417800	EntrezGene:9269934	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005856	GO:GO:0005874	PANTHER:PTHR33403	PANTHER:PTHR33403:SF12	ProteinID:AAP44613.1
ProteinID:ABF96634.1	ProteinID:ABF96635.1	ProteinID:BAH92201.1	ProteinID:BAS84713.1	ProteinID:EAZ27335.1	RefSeq:XP_015632789.1
SEG:seg	UniParc:UPI000019C5FE	UniProt:Q7Y1L9	MapMan:20.1.5.1.3	:	:

Description

Similar to Nap16kDa protein. (Os03t0417800-01);Nitrilase associated protein-like. (Os03t0417800-02)

Coordinates

chr3:-:17347326..17350501

Molecular Weight (calculated)

11189.9 Da

IEP (calculated)

10.462

GRAVY (calculated)

-0.500

Length

116 amino acids

Sequence
(BLAST)

001: MSRGGSAGGG QSSLGYLFGG NEAPKPAAKP APAAAPAPAP APAPAAAVAA PAEKPSPAKA DATKQIPAGI QGSRSNNNYH RADGQNTGNF LTDRPSTKVH
101: AAPGGGSSLG YLFGGN

Best Arabidopsis Sequence Match ( AT1G26355.1 )
(BLAST)

001: MGRGVSVGGG QSSLGYLFGS GEAPKPAINN APAPSSETLP ISADPSPKHV AAQTVNVTKQ IPAGINKSST NNYIRADGQN TGNFLTDRPS TKVHAAPGGG
101: SSLDYLFGGG GSN

Arabidopsis Description

SP1L1Protein SPIRAL1-like 1 [Source:UniProtKB/Swiss-Prot;Acc:B3H4F1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.