Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G032830.1 | Barley | plastid | 79.0 | 79.0 |
| Os03t0417800-01 | Rice | extracellular | 76.0 | 65.52 |
| Zm00001d047282_P001 | Maize | mitochondrion | 69.0 | 48.25 |
| Zm00001d029527_P003 | Maize | cytosol | 72.0 | 39.34 |
| Zm00001d040773_P001 | Maize | plastid | 54.0 | 36.24 |
| KXG39652 | Sorghum | mitochondrion | 72.0 | 32.43 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G183100.1 | EnsemblPlantsGene:TraesCS2D01G183100 | PANTHER:PTHR33403 | PANTHER:PTHR33403:SF12 | SEG:seg | MapMan:20.1.5.1.3 |
Description
No Description!
Coordinates
chr2D:-:127516483..127519733
Molecular Weight (calculated)
9816.4 Da
IEP (calculated)
10.104
GRAVY (calculated)
-0.448
Length
100 amino acids
Sequence
(BLAST)
(BLAST)
1: MSRGGSAGGG QSSLGYLFGD GEPAKPAAAP AAKPAPAEKP ALAAADVTKQ IPAGIPGSRA NNYYRADGQN TGNFLTDRPS TKVHAAPGGG SSLGYLFGGK
001: MGRGVSVGGG QSSLGYLFGS GEAPKPAINN APAPSSETLP ISADPSPKHV AAQTVNVTKQ IPAGINKSST NNYIRADGQN TGNFLTDRPS TKVHAAPGGG
101: SSLDYLFGGG GSN
101: SSLDYLFGGG GSN
Arabidopsis Description
SP1L1Protein SPIRAL1-like 1 [Source:UniProtKB/Swiss-Prot;Acc:B3H4F1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.