Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plasma membrane 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- golgi 2
- cytosol 1
- plastid 2
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os10t0155400-00 | Rice | mitochondrion | 78.67 | 15.86 |
| Os04t0183300-01 | Rice | cytosol | 56.0 | 13.29 |
| Os04t0182900-00 | Rice | plastid | 52.0 | 12.46 |
| Os04t0183500-01 | Rice | extracellular, plasma membrane | 82.67 | 12.33 |
| Os04t0184100-01 | Rice | extracellular | 81.33 | 12.1 |
| Os06t0271300-00 | Rice | cytosol, plastid | 74.67 | 10.41 |
| Os11t0123033-01 | Rice | plastid | 5.33 | 1.95 |
| Os04t0184500-00 | Rice | cytosol, plastid | 2.67 | 1.12 |
| Os04t0185000-00 | Rice | cytosol | 2.67 | 1.1 |
| Os04t0182875-00 | Rice | extracellular | 1.33 | 0.52 |
| Os01t0115200-00 | Rice | mitochondrion, plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Os04t0184801-00 | EnsemblPlantsGene:Os04g0184801 | Gene3D:3.90.1300.10 | InterPro:AS_sf | InterPro:Amidase_dom | InterPro:IPR036928 |
| KEGG:00970+6.3.5.7 | PANTHER:PTHR42678 | PFAM:PF01425 | ProteinID:BAS87992.1 | SEG:seg | SUPFAM:SSF75304 |
| UniParc:UPI000393AD10 | UniProt:A0A0P0W7P5 | MapMan:35.1 | : | : | : |
Description
Similar to OSIGBa0148J22.3 protein. (Os04t0184801-00)
Coordinates
chr4:+:5740039..5740266
Molecular Weight (calculated)
7561.1 Da
IEP (calculated)
8.792
GRAVY (calculated)
0.276
Length
75 amino acids
Sequence
(BLAST)
(BLAST)
1: MRKNPYVVTA TPCWSSSGSA VAAAANMAAV TLGTETDGSI ICPASWNSVV GIKPTVGLTS RAGVIPITPR QDTVG
001: MVALRFFFFS SLLILLILSQ ALIMSVGSAS QIRLSSTFSI QEATIEDIRV AFNEKRLTSK QLVELYLEAI SKLNPILHAV IETNPDALIQ AEIADRERDL
101: KNTTKLPILH GVPVLLKDSI STKDKLNTTA GSFALLGSVV ARDAGVVKRL RESGAVILGK ASLSEWAHFR SFSIPDGWSA RGLQGKNPYV LSANPSGSSS
201: GSAISVTANL VAVSLGTETD GSILSPASQN SVVGIKPSVG LTSRAGVVPI SLRQDSIGPI CRTVSDAVHL LDAIVGYDPL DEATKTASEF IPEGGYKQFL
301: TTSGLKGKRL GIVMKHSSLL DHHIKTLRRE GAIVINNLTI PNIEVIVGGT DSGEEIALLA EFKMSLNAYL KELVKSPVRS LADVIAYNEE FAEQEKVKEW
401: GQEVFLTAEA TSGMGEKEKT ALQKMKELSR NGIEKLIEEN KLDAIVTLGS DLSSVLAIGG YPGINVPAGY DSGGVPYGIS FGGLRFSEPK LIEIAFAFEQ
501: ATLIRKPPKF IA
101: KNTTKLPILH GVPVLLKDSI STKDKLNTTA GSFALLGSVV ARDAGVVKRL RESGAVILGK ASLSEWAHFR SFSIPDGWSA RGLQGKNPYV LSANPSGSSS
201: GSAISVTANL VAVSLGTETD GSILSPASQN SVVGIKPSVG LTSRAGVVPI SLRQDSIGPI CRTVSDAVHL LDAIVGYDPL DEATKTASEF IPEGGYKQFL
301: TTSGLKGKRL GIVMKHSSLL DHHIKTLRRE GAIVINNLTI PNIEVIVGGT DSGEEIALLA EFKMSLNAYL KELVKSPVRS LADVIAYNEE FAEQEKVKEW
401: GQEVFLTAEA TSGMGEKEKT ALQKMKELSR NGIEKLIEEN KLDAIVTLGS DLSSVLAIGG YPGINVPAGY DSGGVPYGIS FGGLRFSEPK LIEIAFAFEQ
501: ATLIRKPPKF IA
Arabidopsis Description
Amidase family protein [Source:TAIR;Acc:AT4G34880]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.