Factsheet for Os04t0184100-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plasma membrane 5
extracellular 7
endoplasmic reticulum 5
vacuole 5
golgi 5
plastid 1
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
PTS1:	peroxisome
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

extracellular: 19038476

msms PMID: 19038476 doi

XY Chen, ST Kim, WK Cho, Y Rim, S Kim, SW Kim, KY Kang, ZY Park, JY Kim

Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju 660-701, Republic of Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0184801-00	Rice	mitochondrion	12.1	81.33
Os04t0183500-01	Rice	extracellular, plasma membrane	77.18	77.34
TraesCS2B01G035200.1	Wheat	cytosol	70.44	72.45
TraesCSU01G233300.1	Wheat	extracellular, golgi	46.83	72.17
Os04t0184500-00	Rice	cytosol, plastid	25.6	72.07
TraesCS2D01G026900.1	Wheat	extracellular, golgi	70.83	71.26
TraesCS2B01G037400.1	Wheat	nucleus	71.03	71.17
TraesCS3D01G364700.2	Wheat	extracellular, vacuole	70.83	70.69
TraesCS2A01G064000.1	Wheat	extracellular, vacuole	71.03	70.61
TraesCS2B01G035900.1	Wheat	extracellular, golgi	70.44	70.58
Os04t0183300-01	Rice	cytosol	44.25	70.57
TraesCS2D01G026300.1	Wheat	cytosol	70.24	70.24
TraesCS2B01G037200.1	Wheat	plastid	42.66	69.13
KXG36216	Sorghum	cytosol	67.46	68.83
EER97209	Sorghum	extracellular	69.05	68.24
EER99375	Sorghum	extracellular	68.85	68.04
Os04t0182900-00	Rice	plastid	41.67	67.09
Os04t0182875-00	Rice	extracellular	25.4	67.02
TraesCS2D01G027200.1	Wheat	cytosol	69.64	66.35
Os04t0185000-00	Rice	cytosol	23.81	66.3
TraesCS2B01G036000.1	Wheat	cytosol	36.51	65.48
TraesCS2D01G062200.1	Wheat	cytosol	40.28	65.06
TraesCSU01G211000.1	Wheat	cytosol	34.13	63.7
TraesCS2B01G036100.1	Wheat	cytosol	25.4	63.37
Os06t0271300-00	Rice	cytosol, plastid	60.71	56.88
Os10t0155400-00	Rice	mitochondrion	37.1	50.27
Os01t0115200-00	Rice	mitochondrion, plastid	14.29	46.15
EES11858	Sorghum	extracellular	6.94	43.75
GSMUA_Achr2P11220_001	Banana	endoplasmic reticulum	57.74	40.99
Os11t0123033-01	Rice	plastid	16.27	40.0

Protein Annotations

KEGG:00970+6.3.5.7	Gene3D:3.90.1300.10	MapMan:35.1	EntrezGene:4335108	EMBL:AK102846	InterPro:AS_sf
InterPro:Amidase_dom	UniProt:B7ETP8	ProteinID:BAS87987.1	InterPro:IPR036928	EnsemblPlantsGene:Os04g0184100	EnsemblPlants:Os04t0184100-01
PFAM:PF01425	PANTHER:PTHR42678	PANTHER:PTHR42678:SF3	SUPFAM:SSF75304	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI0000DD8F59	RefSeq:XP_015633994.1	SEG:seg	:	:	:

Description

Similar to OSIGBa0140C02.7 protein. (Os04t0184100-01)

Coordinates

chr4:+:5728101..5731927

Molecular Weight (calculated)

53955.1 Da

IEP (calculated)

8.843

GRAVY (calculated)

0.040

Length

504 amino acids

Sequence
(BLAST)

001: MAQRRLLLAI MALAAVAAAT GFEFHEATVD AIQLGFSNGS LTSTALVRFY LDQITRLNPL LHAVIEVNPD ALAQAARADD ERATGRRCGP LHGVPVLLKD
101: NIATRDRLNT TAGSFALLGS VVPRDAGVAA RLRAAGAVIL GKASLTEWSA YRPAPNGWSA RGGQTLNPYV RSFTPCGSSS GSAVAAAANM AAVTLGTETD
201: GSILCPASLN SVVGIKPTVG LTSRAGVVPI SPRQDSVGPI CRTVSDAVHV LDAIVGYDAL DAEATGAASK YIPNGGYGQF LRMDGFKGKR IGIPNGFFTQ
301: EIFEKKQLRA YQKHIQLMRK HGAMVIENID IAKNLTEVQN VLFSNEHIAM IAEFKLSLNA YLSDLLYSPV RSLADVIAFN KAHPVEERLK DFGQPYFIEA
401: EKTNGIGPVE KASIQHLNKL SADGLEKLMR MHQLDAIVTP NDNGRVFFAV SGMPAITVPA GYDSQGVPFG TCFGGLKGYE PRLIEMAYAY EQATKVRMMP
501: GFKM

Best Arabidopsis Sequence Match ( AT4G34880.2 )
(BLAST)

001: MVALRFFFFS SLLILLILSQ ALIMSVGSAS QIRLSSTFSI QEATIEDIRV AFNEKRLTSK QLVELYLEAI SKLNPILHAV IETNPDALIQ AEIADRERDL
101: KNTTKLPILH GVPVLLKDSI STKDKLNTTA GSFALLGSVV ARDAGVVKRL RESGAVILGK ASLSEWAHFR SFSIPDGWSA RGLQGKNPYV LSANPSGSSS
201: GSAISVTANL VAVSLGTETD GSILSPASQN SVVGIKPSVG LTSRAGVVPI SLRQDSIGPI CRTVSDAVHL LDAIVGYDPL DEATKTASEF IPEGGYKQFL
301: TTSGLKGKRL GIVMKHSSLL DHHIKTLRRE GAIVINNLTI PNIEVIVGGT DSGEEIALLA EFKMSLNAYL KELVKSPVRS LADVIAYNEE FAEQEKVKEW
401: GQEVFLTAEA TSGMGEKEKT ALQKMKELSR NGIEKLIEEN KLDAIVTLGS DLSSVLAIGG YPGINVPAGY DSGGVPYGIS FGGLRFSEPK LIEIAFAFEQ
501: ATLIRKPPKF IA

Arabidopsis Description

Amidase family protein [Source:TAIR;Acc:AT4G34880]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.