Factsheet for TraesCS2D01G027200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 1
cytosol 2
plasma membrane 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G364700.2	Wheat	extracellular, vacuole	77.5	81.19
TraesCS2D01G026300.1	Wheat	cytosol	77.32	81.15
TraesCS2D01G026900.1	Wheat	extracellular, golgi	75.8	80.04
HORVU2Hr1G003980.8	Barley	cytosol	58.22	80.0
TraesCS2D01G062200.1	Wheat	cytosol	43.48	73.72
Os04t0184500-00	Rice	cytosol, plastid	23.82	70.39
Os04t0184100-01	Rice	extracellular	66.35	69.64
Os04t0183500-01	Rice	extracellular, plasma membrane	66.16	69.58
Zm00001d004288_P001	Maize	extracellular	24.57	67.36
TraesCS2D01G027000.1	Wheat	golgi, plasma membrane, vacuole	63.71	66.21
Os04t0182875-00	Rice	extracellular	23.82	65.97
CDY28936	Canola	plastid	45.56	61.17
PGSC0003DMT400004114	Potato	plastid	16.26	58.5
VIT_03s0038g02030.t01	Wine grape	mitochondrion	51.42	58.37
VIT_03s0038g02040.t01	Wine grape	extracellular	56.52	58.17
Bra011569.1-P	Field mustard	cytosol	39.89	57.97
CDY51679	Canola	endoplasmic reticulum, vacuole	50.09	56.5
VIT_03s0038g02010.t01	Wine grape	extracellular, vacuole	50.47	56.33
Bra022128.1-P	Field mustard	endoplasmic reticulum, vacuole	52.55	55.94
KRH42701	Soybean	cytosol	51.42	55.51
TraesCS1D01G425500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	53.88	55.13
Solyc01g111220.2.1	Tomato	extracellular	53.12	54.88
PGSC0003DMT400005106	Potato	extracellular	43.67	54.48
CDX69095	Canola	cytosol	40.08	54.22
KRH58810	Soybean	nucleus	52.74	53.86
KRH42703	Soybean	cytosol, extracellular	9.07	53.33
AT4G34880.2	Thale cress	vacuole	51.61	53.32
Solyc11g071550.1.1	Tomato	extracellular, nucleus	50.85	53.16
VIT_03s0038g01970.t01	Wine grape	cytosol	20.79	53.14
PGSC0003DMT400048145	Potato	extracellular	50.28	52.67
PGSC0003DMT400004112	Potato	extracellular	52.93	51.47
KRH42704	Soybean	cytosol	19.47	49.05
CDX75470	Canola	plastid	27.41	47.7
CDX75471	Canola	cytosol	17.58	46.97
VIT_03s0038g02020.t01	Wine grape	mitochondrion	21.55	44.36
GSMUA_Achr2P11220_001	Banana	endoplasmic reticulum	55.39	41.27
Os01t0115200-00	Rice	mitochondrion, plastid	11.53	39.1
VIT_03s0038g01990.t01	Wine grape	nucleus, peroxisome, plastid	42.91	38.02
VIT_03s0038g02000.t01	Wine grape	plasma membrane	55.58	28.66

Protein Annotations

EnsemblPlants:TraesCS2D01G027200.1	EnsemblPlantsGene:TraesCS2D01G027200	Gene3D:3.90.1300.10	InterPro:AS_sf	InterPro:Amidase_dom	InterPro:IPR036928
KEGG:00970+6.3.5.7	PANTHER:PTHR42678	PANTHER:PTHR42678:SF3	PFAM:PF01425	SEG:seg	SUPFAM:SSF75304
TMHMM:TMhelix	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr2D:+:11389506..11392131

Molecular Weight (calculated)

56025.2 Da

IEP (calculated)

8.464

GRAVY (calculated)

0.034

Length

529 amino acids

Sequence
(BLAST)

001: MTSTRQATDH TDSTVKLSSA QLSMAWLRLQ AAAAVLALTA IAGAAHGFEF HEATIDAIQL GFRNGSLTST ALVRFYLDQI GRLNPLLRAV IEVNPDALRQ
101: AACADAERGR GQPTGALHGV PVLLKDNIAT RDALNTTAGS LALLGSVVRR DAGVAARLRR AGAVVLGKSN PSEWSEFRQV DNGWSARGGQ TRNPYVLSSD
201: PCGSSAGSGV AAAANMAAVT LGTDTDGSIL CPSSFNSVVG IRPTLGLTSR AGVVPITPLQ DTVGPICRTL SDAVHVLDAI VGYDELDAAA TRVASKFIPP
301: GGYVQFLKKD GLRGKRVGVL RGFFQSYAGT RRLRVYEQHL ATMRKHGAMV VDNLHVAANP TALLDDISSN EGIAVVAEFK LSINAYLADL VYSPVRLLAD
401: IIAFNNAHPI EERMKDFGQD DLIAAQNTSG IGPVERVAIR RLKELSANGL EKLMKEHQLD AIVTPGSDAS SLLATGGHPG IIVPAGFNEQ GVPFGICFGG
501: LQGYEPRLIE MAYAFEQATK VRKPPMFKP

Best Arabidopsis Sequence Match ( AT4G34880.1 )
(BLAST)

001: MVALRFFFFS SLLILLILSQ ALIMSVGSAS QIRLSSTFSI QEATIEDIRV AFNEKRLTSK QLVELYLEAI SKLNPILHAV IETNPDALIQ AEIADRERDL
101: KNTTKLPILH GVPVLLKDSI STKDKLNTTA GSFALLGSVV ARDAGVVKRL RESGAVILGK ASLSEWAHFR SFSIPDGWSA PSQNSVVGIK PSVGLTSRAG
201: VVPISLRQDS IGPICRTVSD AVHLLDAIVG YDPLDEATKT ASEFIPEGGY KQFLTTSGLK GKRLGIVMKH SSLLDHHIKT LRREGAIVIN NLTIPNIEVI
301: VGGTDSGEEI ALLAEFKMSL NAYLKELVKS PVRSLADVIA YNEEFAEQEK VKEWGQEVFL TAEATSGMGE KEKTALQKMK ELSRNGIEKL IEENKLDAIV
401: TLGSDLSSVL AIGGYPGINV PAGYDSGGVP YGISFGGLRF SEPKLIEIAF AFEQATLIRK PPKFIA

Arabidopsis Description

Amidase family protein [Source:TAIR;Acc:AT4G34880]
SUBAcon: [vacuole,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.