Factsheet for Zm00001d004288_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plasma membrane 4
extracellular 6
endoplasmic reticulum 4
vacuole 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0182875-00	Rice	extracellular	62.18	62.83
Os04t0184500-00	Rice	cytosol, plastid	58.03	62.57
Os01t0115200-00	Rice	mitochondrion, plastid	33.68	41.67
TraesCSU01G233300.1	Wheat	extracellular, golgi	64.25	37.92
Bra011569.1-P	Field mustard	cytosol	54.4	28.85
HORVU1Hr1G091390.1	Barley	cytosol, extracellular	24.35	28.83
TraesCS2B01G037400.1	Wheat	nucleus	69.43	26.64
TraesCS2D01G026900.1	Wheat	extracellular, golgi	68.91	26.55
CDX75470	Canola	plastid	41.45	26.32
KXG36216	Sorghum	cytosol	66.32	25.91
TraesCS2B01G035900.1	Wheat	extracellular, golgi	67.36	25.84
TraesCS3D01G364700.2	Wheat	extracellular, vacuole	67.36	25.74
TraesCS2D01G026300.1	Wheat	cytosol	64.77	24.8
TraesCS2D01G027200.1	Wheat	cytosol	67.36	24.57
EER99375	Sorghum	extracellular	64.77	24.51
EER97209	Sorghum	extracellular	64.77	24.51
TraesCS2B01G035200.1	Wheat	cytosol	62.18	24.49
TraesCS2A01G064000.1	Wheat	extracellular, vacuole	64.25	24.46
Bra022128.1-P	Field mustard	endoplasmic reticulum, vacuole	58.03	22.54
AT4G34880.2	Thale cress	vacuole	56.99	21.48
VIT_03s0038g02040.t01	Wine grape	extracellular	56.99	21.4
CDY51679	Canola	endoplasmic reticulum, vacuole	49.74	20.47
CDX69095	Canola	cytosol	40.93	20.2
KRH42701	Soybean	cytosol	50.26	19.8
Solyc01g111220.2.1	Tomato	extracellular	51.81	19.53
PGSC0003DMT400004112	Potato	extracellular	53.37	18.93
PGSC0003DMT400048145	Potato	extracellular	49.22	18.81
KRH58810	Soybean	nucleus	50.26	18.73
Solyc11g071550.1.1	Tomato	extracellular, nucleus	48.7	18.58
VIT_03s0038g02030.t01	Wine grape	mitochondrion	44.56	18.45
CDY28936	Canola	plastid	36.27	17.77
PGSC0003DMT400005106	Potato	extracellular	35.75	16.27
VIT_03s0038g02010.t01	Wine grape	extracellular, vacuole	39.9	16.24
GSMUA_Achr2P11220_001	Banana	endoplasmic reticulum	52.85	14.37
VIT_03s0038g02020.t01	Wine grape	mitochondrion	16.06	12.06
VIT_03s0038g02000.t01	Wine grape	plasma membrane	51.3	9.65
PGSC0003DMT400004114	Potato	plastid	7.25	9.52
VIT_03s0038g01990.t01	Wine grape	nucleus, peroxisome, plastid	29.02	9.38
TraesCS2B01G036100.1	Wheat	cytosol	4.66	4.46
TraesCSU01G211000.1	Wheat	cytosol	6.22	4.44
VIT_03s0038g01970.t01	Wine grape	cytosol	4.66	4.35
CDX75471	Canola	cytosol	4.15	4.04
TraesCS2B01G036000.1	Wheat	cytosol	5.18	3.56
TraesCS2B01G037200.1	Wheat	plastid	5.7	3.54
TraesCS2D01G062200.1	Wheat	cytosol	5.7	3.53
HORVU2Hr1G004020.1	Barley	cytosol, mitochondrion	1.04	3.33
Zm00001d004287_P001	Maize	cytosol	4.66	2.87
KRH42704	Soybean	cytosol	2.59	2.38
EES11858	Sorghum	extracellular	0.52	1.25
KRH42703	Soybean	cytosol, extracellular	0.0	0.0

Protein Annotations

EnsemblPlants:Zm00001d004288_P001	EnsemblPlants:Zm00001d004288_T001	EnsemblPlantsGene:Zm00001d004288	Gene3D:3.90.1300.10	InterPro:AS_sf	InterPro:Amidase_dom
InterPro:IPR036928	KEGG:00970+6.3.5.7	PANTHER:PTHR42678	PANTHER:PTHR42678:SF3	PFAM:PF01425	ProteinID:ONM18695.1
SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF75304	UniParc:UPI000844F598	UniProt:A0A1D6EEQ4	MapMan:35.1

Description

Amidase family protein

Coordinates

chr2:-:100314691..100315272

Molecular Weight (calculated)

20219.6 Da

IEP (calculated)

11.041

GRAVY (calculated)

0.221

Length

193 amino acids

Sequence
(BLAST)

001: MARLRLLLLA AVLALTAGTC RSFEFQEATL DAIHLGFKNG SLTSMALVQH YLGQISRLNP LLHAVIEVNP DALRQAARAD AERRSSGDGR VGGLHGVPVL
101: LKDNIGTRDV LNTTAGSLAL LGSVVRRDAG VVTRLRRAGA VVLGKANMDE WANFRSAIGT GGWSARGGQG KVSAVVGFPL SLNCLLSPTD LAA

Best Arabidopsis Sequence Match ( AT4G34880.2 )
(BLAST)

001: MVALRFFFFS SLLILLILSQ ALIMSVGSAS QIRLSSTFSI QEATIEDIRV AFNEKRLTSK QLVELYLEAI SKLNPILHAV IETNPDALIQ AEIADRERDL
101: KNTTKLPILH GVPVLLKDSI STKDKLNTTA GSFALLGSVV ARDAGVVKRL RESGAVILGK ASLSEWAHFR SFSIPDGWSA RGLQGKNPYV LSANPSGSSS
201: GSAISVTANL VAVSLGTETD GSILSPASQN SVVGIKPSVG LTSRAGVVPI SLRQDSIGPI CRTVSDAVHL LDAIVGYDPL DEATKTASEF IPEGGYKQFL
301: TTSGLKGKRL GIVMKHSSLL DHHIKTLRRE GAIVINNLTI PNIEVIVGGT DSGEEIALLA EFKMSLNAYL KELVKSPVRS LADVIAYNEE FAEQEKVKEW
401: GQEVFLTAEA TSGMGEKEKT ALQKMKELSR NGIEKLIEEN KLDAIVTLGS DLSSVLAIGG YPGINVPAGY DSGGVPYGIS FGGLRFSEPK LIEIAFAFEQ
501: ATLIRKPPKF IA

Arabidopsis Description

Amidase family protein [Source:TAIR;Acc:AT4G34880]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.