Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plasma membrane 3
- extracellular 5
- endoplasmic reticulum 3
- vacuole 3
- golgi 3
- plastid 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH42703 | Soybean | cytosol, extracellular | 33.75 | 30.0 |
| TraesCS2B01G036100.1 | Wheat | cytosol | 42.5 | 16.83 |
| TraesCSU01G211000.1 | Wheat | cytosol | 43.75 | 12.96 |
| CDX75471 | Canola | cytosol | 30.0 | 12.12 |
| Os04t0183500-01 | Rice | extracellular, plasma membrane | 47.5 | 7.55 |
| PGSC0003DMT400005106 | Potato | extracellular | 38.75 | 7.31 |
| KXG36216 | Sorghum | cytosol | 45.0 | 7.29 |
| EER97209 | Sorghum | extracellular | 45.0 | 7.06 |
| Os04t0184100-01 | Rice | extracellular | 43.75 | 6.94 |
| CDX69095 | Canola | cytosol | 33.75 | 6.91 |
| EES10484 | Sorghum | golgi, vacuole | 42.5 | 6.88 |
| EER99375 | Sorghum | extracellular | 42.5 | 6.67 |
| VIT_03s0038g02030.t01 | Wine grape | mitochondrion | 38.75 | 6.65 |
| EES11861 | Sorghum | extracellular, golgi, plasma membrane | 42.5 | 6.63 |
| CDY28936 | Canola | plastid | 32.5 | 6.6 |
| VIT_03s0038g02010.t01 | Wine grape | extracellular, vacuole | 38.75 | 6.54 |
| VIT_03s0038g02040.t01 | Wine grape | extracellular | 38.75 | 6.03 |
| PGSC0003DMT400048145 | Potato | extracellular | 37.5 | 5.94 |
| Solyc11g071550.1.1 | Tomato | extracellular, nucleus | 37.5 | 5.93 |
| KRH42701 | Soybean | cytosol | 36.25 | 5.92 |
| KRH58810 | Soybean | nucleus | 37.5 | 5.79 |
| CDY51679 | Canola | endoplasmic reticulum, vacuole | 33.75 | 5.76 |
| Bra022128.1-P | Field mustard | endoplasmic reticulum, vacuole | 35.0 | 5.63 |
| KXG38675 | Sorghum | endoplasmic reticulum, vacuole | 37.5 | 5.52 |
| Solyc01g111220.2.1 | Tomato | extracellular | 35.0 | 5.47 |
| PGSC0003DMT400004112 | Potato | extracellular | 33.75 | 4.96 |
| VIT_03s0038g01990.t01 | Wine grape | nucleus, peroxisome, plastid | 35.0 | 4.69 |
| AT4G34880.2 | Thale cress | vacuole | 30.0 | 4.69 |
| GSMUA_Achr2P11220_001 | Banana | endoplasmic reticulum | 40.0 | 4.51 |
| VIT_03s0038g02000.t01 | Wine grape | plasma membrane | 38.75 | 3.02 |
| Os04t0184500-00 | Rice | cytosol, plastid | 3.75 | 1.68 |
| Os04t0182875-00 | Rice | extracellular | 3.75 | 1.57 |
| VIT_03s0038g02020.t01 | Wine grape | mitochondrion | 3.75 | 1.17 |
| CDX75470 | Canola | plastid | 2.5 | 0.66 |
| Bra011569.1-P | Field mustard | cytosol | 2.5 | 0.55 |
| Zm00001d004288_P001 | Maize | extracellular | 1.25 | 0.52 |
| KRH42704 | Soybean | cytosol | 1.25 | 0.48 |
| VIT_03s0038g01970.t01 | Wine grape | cytosol | 0.0 | 0.0 |
| PGSC0003DMT400004114 | Potato | plastid | 0.0 | 0.0 |
| Os01t0115200-00 | Rice | mitochondrion, plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:EES11858 | EnsemblPlantsGene:SORBI_3006G027700 | Gene3D:3.90.1300.10 | InterPro:AS_sf | InterPro:IPR036928 | KEGG:00970+6.3.5.7 |
| MetaCyc:PWY-5921 | PANTHER:PTHR42678 | PANTHER:PTHR42678:SF3 | ProteinID:EES11858 | ProteinID:EES11858.1 | RefSeq:XP_002447530.1 |
| SUPFAM:SSF75304 | UniParc:UPI0001A872FC | UniProt:C5YCU2 | MapMan:35.2 | : | : |
Description
hypothetical protein
Coordinates
chr6:-:5696252..5696955
Molecular Weight (calculated)
9030.2 Da
IEP (calculated)
8.473
GRAVY (calculated)
0.071
Length
80 amino acids
Sequence
(BLAST)
(BLAST)
1: MTVLPLFLQG ITVPAGYGKL GVPFGICFGR LKGYEPRLME MAYVFEQATR ERLKEFRQLI FLVSENNTGI GAFEIPESKN
001: MGSRRDYRSM RSCSGWRRIL LLIPVLFLLP HLSSLVDFSS DSATRNDART IPNKKLDHLV LGPVAGQGLS DRFHCRGTKA LNKTHGSTSH VSGAGNGVSF
101: VTVFTVYNTS LGNVKSSNPV SVVGNVTYSK PERSMAVLNA FANFIQVTMP KSNVVILTDP ASDLSIQQSN VILQPVQGDY SRGNLMLQRI RSYITFLEMK
201: LEKNEGGINH YIFTDSDIAV VDDVGTIFDK HSSFHLALTF RNNKDQPLNS GFIAVRGTRE GILRAKVFLE EVLKAYKTKY MKASRMLGDQ LALVSVVKSH
301: ASFDAKRFTK PQAFTEEIAG ASVLFLPCAL YNWTPPEGAG QFHGMPLDVK IVHFKGSRKR LMLEAWNFYK STSNIPDMLC LVLGSGRTKY DF
101: VTVFTVYNTS LGNVKSSNPV SVVGNVTYSK PERSMAVLNA FANFIQVTMP KSNVVILTDP ASDLSIQQSN VILQPVQGDY SRGNLMLQRI RSYITFLEMK
201: LEKNEGGINH YIFTDSDIAV VDDVGTIFDK HSSFHLALTF RNNKDQPLNS GFIAVRGTRE GILRAKVFLE EVLKAYKTKY MKASRMLGDQ LALVSVVKSH
301: ASFDAKRFTK PQAFTEEIAG ASVLFLPCAL YNWTPPEGAG QFHGMPLDVK IVHFKGSRKR LMLEAWNFYK STSNIPDMLC LVLGSGRTKY DF
Arabidopsis Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; Has 45 Blast hits to 45 proteins in 16 species: Arc /.../0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). [Source:TAIR;Acc:AT2G45320]
SUBAcon: [golgi,mitochondrion,endoplasmic reticulum]
SUBAcon: [golgi,mitochondrion,endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.