Subcellular Localization
min:
: max
Winner_takes_all: cytosol, plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- plastid 3
- plasma membrane 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os04t0182875-00 | Rice | extracellular | 68.16 | 63.87 |
| Zm00001d004288_P001 | Maize | extracellular | 62.57 | 58.03 |
| Os01t0115200-00 | Rice | mitochondrion, plastid | 38.55 | 44.23 |
| TraesCSU01G233300.1 | Wheat | extracellular, golgi | 67.04 | 36.7 |
| HORVU1Hr1G091390.1 | Barley | cytosol, extracellular | 29.61 | 32.52 |
| Os11t0123033-01 | Rice | plastid | 36.87 | 32.2 |
| Os04t0184100-01 | Rice | extracellular | 72.07 | 25.6 |
| Os04t0183500-01 | Rice | extracellular, plasma membrane | 70.95 | 25.25 |
| EER97209 | Sorghum | extracellular | 69.27 | 24.31 |
| KXG36216 | Sorghum | cytosol | 67.04 | 24.29 |
| TraesCS2D01G026900.1 | Wheat | extracellular, golgi | 67.04 | 23.95 |
| TraesCS2D01G027200.1 | Wheat | cytosol | 70.39 | 23.82 |
| EER99375 | Sorghum | extracellular | 67.6 | 23.73 |
| TraesCS3D01G364700.2 | Wheat | extracellular, vacuole | 65.92 | 23.37 |
| TraesCS2B01G037400.1 | Wheat | nucleus | 65.36 | 23.26 |
| TraesCS2D01G026300.1 | Wheat | cytosol | 65.36 | 23.21 |
| TraesCS2B01G035900.1 | Wheat | extracellular, golgi | 64.8 | 23.06 |
| TraesCS2B01G035200.1 | Wheat | cytosol | 63.13 | 23.06 |
| TraesCS2A01G064000.1 | Wheat | extracellular, vacuole | 64.25 | 22.68 |
| Os10t0155400-00 | Rice | mitochondrion | 46.93 | 22.58 |
| Os06t0271300-00 | Rice | cytosol, plastid | 40.22 | 13.38 |
| GSMUA_Achr2P11220_001 | Banana | endoplasmic reticulum | 47.49 | 11.97 |
| EES11858 | Sorghum | extracellular | 1.68 | 3.75 |
| Os04t0184801-00 | Rice | mitochondrion | 1.12 | 2.67 |
| HORVU2Hr1G004020.1 | Barley | cytosol, mitochondrion | 0.56 | 1.67 |
| TraesCS2B01G036000.1 | Wheat | cytosol | 2.23 | 1.42 |
| TraesCS2D01G062200.1 | Wheat | cytosol | 2.23 | 1.28 |
| TraesCS2B01G037200.1 | Wheat | plastid | 1.68 | 0.96 |
| Os04t0182900-00 | Rice | plastid | 1.68 | 0.96 |
| TraesCSU01G211000.1 | Wheat | cytosol | 1.12 | 0.74 |
| Os04t0183300-01 | Rice | cytosol | 1.12 | 0.63 |
| TraesCS2B01G036100.1 | Wheat | cytosol | 0.56 | 0.5 |
| Os04t0185000-00 | Rice | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Os04t0184500-00 | EnsemblPlantsGene:Os04g0184500 | Gene3D:3.90.1300.10 | InterPro:AS_sf | InterPro:Amidase_dom | InterPro:IPR036928 |
| KEGG:00970+6.3.5.7 | PANTHER:PTHR42678 | PANTHER:PTHR42678:SF3 | PFAM:PF01425 | ProteinID:BAS87990.1 | SEG:seg |
| SUPFAM:SSF75304 | UniParc:UPI000393BD75 | UniProt:A0A0P0W7K4 | MapMan:35.1 | : | : |
Description
Similar to OSIGBa0148J22.3 protein. (Os04t0184500-00)
Coordinates
chr4:+:5739476..5740015
Molecular Weight (calculated)
18627.3 Da
IEP (calculated)
10.124
GRAVY (calculated)
0.126
Length
179 amino acids
Sequence
(BLAST)
(BLAST)
001: MALAAAATAC RAFQIEEATF DAIQLGFSNG SLTSTALVRF YLDRVARLNP LLHAVIEVNP DALAQAARAD AERASGRRGF GPLHGVPVLL KDNIATRDRL
101: NTTAGSLALL GSVVRCDAGV AARLRAAGAV ILGKSNPAEW SSFRPLTNGW SARGGETLVS GGSGNPKTLC MSSPQHFIA
101: NTTAGSLALL GSVVRCDAGV AARLRAAGAV ILGKSNPAEW SSFRPLTNGW SARGGETLVS GGSGNPKTLC MSSPQHFIA
001: MVALRFFFFS SLLILLILSQ ALIMSVGSAS QIRLSSTFSI QEATIEDIRV AFNEKRLTSK QLVELYLEAI SKLNPILHAV IETNPDALIQ AEIADRERDL
101: KNTTKLPILH GVPVLLKDSI STKDKLNTTA GSFALLGSVV ARDAGVVKRL RESGAVILGK ASLSEWAHFR SFSIPDGWSA PSQNSVVGIK PSVGLTSRAG
201: VVPISLRQDS IGPICRTVSD AVHLLDAIVG YDPLDEATKT ASEFIPEGGY KQFLTTSGLK GKRLGIVMKH SSLLDHHIKT LRREGAIVIN NLTIPNIEVI
301: VGGTDSGEEI ALLAEFKMSL NAYLKELVKS PVRSLADVIA YNEEFAEQEK VKEWGQEVFL TAEATSGMGE KEKTALQKMK ELSRNGIEKL IEENKLDAIV
401: TLGSDLSSVL AIGGYPGINV PAGYDSGGVP YGISFGGLRF SEPKLIEIAF AFEQATLIRK PPKFIA
101: KNTTKLPILH GVPVLLKDSI STKDKLNTTA GSFALLGSVV ARDAGVVKRL RESGAVILGK ASLSEWAHFR SFSIPDGWSA PSQNSVVGIK PSVGLTSRAG
201: VVPISLRQDS IGPICRTVSD AVHLLDAIVG YDPLDEATKT ASEFIPEGGY KQFLTTSGLK GKRLGIVMKH SSLLDHHIKT LRREGAIVIN NLTIPNIEVI
301: VGGTDSGEEI ALLAEFKMSL NAYLKELVKS PVRSLADVIA YNEEFAEQEK VKEWGQEVFL TAEATSGMGE KEKTALQKMK ELSRNGIEKL IEENKLDAIV
401: TLGSDLSSVL AIGGYPGINV PAGYDSGGVP YGISFGGLRF SEPKLIEIAF AFEQATLIRK PPKFIA
Arabidopsis Description
Amidase family protein [Source:TAIR;Acc:AT4G34880]
SUBAcon: [vacuole,endoplasmic reticulum]
SUBAcon: [vacuole,endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.