Factsheet for TraesCSU01G211000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G036100.1	Wheat	cytosol	64.07	85.64
KRH42703	Soybean	cytosol, extracellular	16.67	50.0
CDX75471	Canola	cytosol	33.33	45.45
EES11858	Sorghum	extracellular	12.96	43.75
Os04t0183500-01	Rice	extracellular, plasma membrane	65.56	35.19
Os04t0184100-01	Rice	extracellular	63.7	34.13
VIT_03s0038g01970.t01	Wine grape	cytosol	25.93	33.82
TraesCSU01G008400.1	Wheat	extracellular, golgi	63.33	33.66
CDY28936	Canola	plastid	48.15	32.99
CDX69095	Canola	cytosol	43.33	29.92
VIT_03s0038g02040.t01	Wine grape	extracellular	54.81	28.79
VIT_03s0038g02030.t01	Wine grape	mitochondrion	48.89	28.33
VIT_03s0038g02010.t01	Wine grape	extracellular, vacuole	49.63	28.27
CDY51679	Canola	endoplasmic reticulum, vacuole	48.15	27.72
KRH42701	Soybean	cytosol	48.89	26.94
Solyc01g111220.2.1	Tomato	extracellular	50.37	26.56
Bra022128.1-P	Field mustard	endoplasmic reticulum, vacuole	48.52	26.36
Solyc11g071550.1.1	Tomato	extracellular, nucleus	48.89	26.09
KRH58810	Soybean	nucleus	48.89	25.48
PGSC0003DMT400048145	Potato	extracellular	47.41	25.35
PGSC0003DMT400004112	Potato	extracellular	50.37	25.0
PGSC0003DMT400005106	Potato	extracellular	39.26	25.0
AT4G34880.2	Thale cress	vacuole	46.67	24.61
KRH42704	Soybean	cytosol	18.89	24.29
VIT_03s0038g01990.t01	Wine grape	nucleus, peroxisome, plastid	48.89	22.11
PGSC0003DMT400004114	Potato	plastid	11.85	21.77
GSMUA_Achr2P11220_001	Banana	endoplasmic reticulum	53.33	20.28
Bra011569.1-P	Field mustard	cytosol	27.04	20.05
VIT_03s0038g02020.t01	Wine grape	mitochondrion	18.15	19.07
TraesCSU01G233300.1	Wheat	extracellular, golgi	21.48	17.74
VIT_03s0038g02000.t01	Wine grape	plasma membrane	50.74	13.35
CDX75470	Canola	plastid	9.26	8.22
Zm00001d004288_P001	Maize	extracellular	4.44	6.22
Os04t0182875-00	Rice	extracellular	1.48	2.09
Os04t0184500-00	Rice	cytosol, plastid	0.74	1.12
Os01t0115200-00	Rice	mitochondrion, plastid	0.37	0.64

Protein Annotations

EnsemblPlants:TraesCSU01G211000.1	EnsemblPlantsGene:TraesCSU01G211000	Gene3D:3.90.1300.10	InterPro:AS_sf	InterPro:Amidase_dom	InterPro:IPR036928
KEGG:00970+6.3.5.7	PANTHER:PTHR42678	PANTHER:PTHR42678:SF3	PFAM:PF01425	SUPFAM:SSF75304	MapMan:35.1

Description

No Description!

Coordinates

chrUn:+:313025826..313027019

Molecular Weight (calculated)

29660.9 Da

IEP (calculated)

7.179

GRAVY (calculated)

-0.109

Length

270 amino acids

Sequence
(BLAST)

001: MEIKCRPMCR TVSDAVHVLD AIVGYDEHDA TATRAASKYI PDGGYAQFLK KDGLKGKRIG VPNGFFQRYG QAQLNVYKQH LATMRKLGAV VVEKLDVAAN
101: LIALLDEIGS NEAIAMQAEF KLSINAYLAD LIHSSVHSLA DIIAFNNKHP VEERLNDFGQ PDLIAAQNTN GIGPRERAAI WRLKELNAEG LEKLMQECQL
201: DTIVAPNSVI SSLLAIGGHP GIVVPAGYDE KGVPFGICFG RLQGYEPRLI EMAYAFEQAT KVRRPPMFKP

Best Arabidopsis Sequence Match ( AT4G34880.1 )
(BLAST)

001: MVALRFFFFS SLLILLILSQ ALIMSVGSAS QIRLSSTFSI QEATIEDIRV AFNEKRLTSK QLVELYLEAI SKLNPILHAV IETNPDALIQ AEIADRERDL
101: KNTTKLPILH GVPVLLKDSI STKDKLNTTA GSFALLGSVV ARDAGVVKRL RESGAVILGK ASLSEWAHFR SFSIPDGWSA PSQNSVVGIK PSVGLTSRAG
201: VVPISLRQDS IGPICRTVSD AVHLLDAIVG YDPLDEATKT ASEFIPEGGY KQFLTTSGLK GKRLGIVMKH SSLLDHHIKT LRREGAIVIN NLTIPNIEVI
301: VGGTDSGEEI ALLAEFKMSL NAYLKELVKS PVRSLADVIA YNEEFAEQEK VKEWGQEVFL TAEATSGMGE KEKTALQKMK ELSRNGIEKL IEENKLDAIV
401: TLGSDLSSVL AIGGYPGINV PAGYDSGGVP YGISFGGLRF SEPKLIEIAF AFEQATLIRK PPKFIA

Arabidopsis Description

Amidase family protein [Source:TAIR;Acc:AT4G34880]
SUBAcon: [vacuole,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.