CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra011569.1-P	Field mustard	cytosol	68.09	56.87
PGSC0003DMT400004114	Potato	plastid	25.66	53.06
TraesCS2B01G037800.1	Wheat	extracellular	47.7	49.32
TraesCSU01G233300.1	Wheat	extracellular, golgi	49.67	46.18
CDX69095	Canola	cytosol	57.57	44.76
Zm00001d004288_P001	Maize	extracellular	26.32	41.45
HORVU2Hr1G003810.1	Barley	extracellular, mitochondrion	34.54	40.86
CDY51679	Canola	endoplasmic reticulum, vacuole	62.83	40.72
CDY28936	Canola	plastid	51.64	39.85
AT4G34880.2	Thale cress	vacuole	64.47	38.28
KRH42704	Soybean	cytosol	24.34	35.24
VIT_03s0038g02010.t01	Wine grape	extracellular, vacuole	54.61	35.02
VIT_03s0038g02030.t01	Wine grape	mitochondrion	49.67	32.4
VIT_03s0038g02040.t01	Wine grape	extracellular	53.62	31.71
KRH42701	Soybean	cytosol	50.0	31.02
Solyc01g111220.2.1	Tomato	extracellular	51.97	30.86
PGSC0003DMT400005106	Potato	extracellular	42.76	30.66
TraesCS2D01G026900.1	Wheat	extracellular, golgi	50.33	30.54
TraesCS2B01G035900.1	Wheat	extracellular, golgi	50.0	30.22
TraesCS2B01G037400.1	Wheat	nucleus	49.67	30.02
EES11861	Sorghum	extracellular, golgi, plasma membrane	50.66	30.02
KRH58810	Soybean	nucleus	50.33	29.54
PGSC0003DMT400048145	Potato	extracellular	49.01	29.5
TraesCS2B01G035200.1	Wheat	cytosol	47.37	29.39
TraesCS2A01G025200.1	Wheat	extracellular	49.34	29.35
TraesCS3D01G364700.2	Wheat	extracellular, vacuole	48.68	29.31
PGSC0003DMT400004112	Potato	extracellular	52.3	29.23
TraesCSU01G008400.1	Wheat	extracellular, golgi	48.68	29.13
HORVU5Hr1G087780.4	Barley	extracellular, golgi	48.36	28.99
TraesCS2A01G064000.1	Wheat	extracellular, vacuole	48.36	28.99
TraesCS2D01G027000.1	Wheat	golgi, plasma membrane, vacuole	48.36	28.88
TraesCS2A01G025000.1	Wheat	golgi, plasma membrane, vacuole	48.36	28.88
TraesCS1A01G417900.1	Wheat	endoplasmic reticulum, golgi	46.71	28.74
TraesCS2B01G037100.1	Wheat	golgi	48.03	28.74
Solyc11g071550.1.1	Tomato	extracellular, nucleus	47.7	28.66
TraesCS2D01G026300.1	Wheat	cytosol	47.37	28.57
KXG36216	Sorghum	cytosol	46.38	28.54
EER97209	Sorghum	extracellular	47.04	28.04
VIT_03s0038g01970.t01	Wine grape	cytosol	19.08	28.02
EER99375	Sorghum	extracellular	46.71	27.84
EES10484	Sorghum	golgi, vacuole	45.07	27.73
TraesCS1D01G425500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	47.04	27.66
TraesCS1B01G448000.1	Wheat	extracellular, vacuole	47.04	27.66
TraesCS2D01G027200.1	Wheat	cytosol	47.7	27.41
VIT_03s0038g02020.t01	Wine grape	mitochondrion	22.37	26.46
KXG38675	Sorghum	endoplasmic reticulum, vacuole	45.07	25.23
TraesCS2B01G035800.1	Wheat	vacuole	39.47	24.64
TraesCS2B01G037500.1	Wheat	cytosol, plastid	28.29	23.56
HORVU1Hr1G091420.1	Barley	cytosol, plastid	31.58	23.41
Os11t0123033-01	Rice	plastid	14.8	21.95
TraesCS2B01G036000.1	Wheat	cytosol	19.41	21.0
TraesCS2B01G037200.1	Wheat	plastid	21.38	20.9
HORVU1Hr1G091390.1	Barley	cytosol, extracellular	10.86	20.25
Zm00001d004287_P001	Maize	cytosol	20.72	20.06
GSMUA_Achr2P11220_001	Banana	endoplasmic reticulum	46.71	20.0
VIT_03s0038g01990.t01	Wine grape	nucleus, peroxisome, plastid	38.82	19.77
HORVU2Hr1G003980.8	Barley	cytosol	23.68	18.7
TraesCS2D01G062200.1	Wheat	cytosol	17.11	16.67
VIT_03s0038g02000.t01	Wine grape	plasma membrane	54.93	16.28
HORVU2Hr1G003990.5	Barley	cytosol	26.64	15.43
TraesCSU01G211000.1	Wheat	cytosol	8.22	9.26
HORVU2Hr1G004020.1	Barley	cytosol, mitochondrion	1.32	6.67
EES11858	Sorghum	extracellular	0.66	2.5
HORVU2Hr1G004030.1	Barley	cytosol	0.33	0.68
TraesCS2B01G036100.1	Wheat	cytosol	0.33	0.5
CDX75471	Canola	cytosol	0.0	0.0
KRH42703	Soybean	cytosol, extracellular	0.0	0.0

Protein Annotations

EnsemblPlants:CDX75470	EnsemblPlantsGene:GSBRNA2T00121366001	Gene3D:3.90.1300.10	GO:A0A078CF21	InterPro:AS_sf	InterPro:Amidase_dom
InterPro:IPR036928	KEGG:00970+6.3.5.7	MetaCyc:PWY-5921	PANTHER:PTHR42678	PANTHER:PTHR42678:SF10	PFAM:PF01425
ProteinID:CDX75470	ProteinID:CDX75470.1	SEG:seg	SUPFAM:SSF75304	UniParc:UPI0004EE299B	MapMan:35.1

Description

BnaA01g02320D

Coordinates

chrLK031804:+:1230917..1233779

Molecular Weight (calculated)

32233.7 Da

IEP (calculated)

8.818

GRAVY (calculated)

0.156

Length

304 amino acids

Sequence
(BLAST)

001: MSFKAGITSA SLRSISHKLA TKLHVSSFSE PKQVNLDSGV IVEESEKGSK GDALNLFMKR SNLLLGVDHF FSAFHLLTST FSIQEATLED IRLAFNEKRL
101: TSKQLVEFYL EEISNLNPIL FADLISTKDK LNTTAGSLAL LGSVVRRDAG VVKRLRESGA VILGKASLSE WAHFRSFAIP SGWSARGLQG KNPYVLTADP
201: CGSSSGSAIS VAANLVAVSL GTETVGSILC PSSQNLVVGI KPTVGLTSRA GVVPVSLRQD SVGPICRTVS DAVIVLDAIV GYDPLDEATK TASQSYPKAV
301: TSSF

Best Arabidopsis Sequence Match ( AT4G34880.2 )
(BLAST)

001: MVALRFFFFS SLLILLILSQ ALIMSVGSAS QIRLSSTFSI QEATIEDIRV AFNEKRLTSK QLVELYLEAI SKLNPILHAV IETNPDALIQ AEIADRERDL
101: KNTTKLPILH GVPVLLKDSI STKDKLNTTA GSFALLGSVV ARDAGVVKRL RESGAVILGK ASLSEWAHFR SFSIPDGWSA RGLQGKNPYV LSANPSGSSS
201: GSAISVTANL VAVSLGTETD GSILSPASQN SVVGIKPSVG LTSRAGVVPI SLRQDSIGPI CRTVSDAVHL LDAIVGYDPL DEATKTASEF IPEGGYKQFL
301: TTSGLKGKRL GIVMKHSSLL DHHIKTLRRE GAIVINNLTI PNIEVIVGGT DSGEEIALLA EFKMSLNAYL KELVKSPVRS LADVIAYNEE FAEQEKVKEW
401: GQEVFLTAEA TSGMGEKEKT ALQKMKELSR NGIEKLIEEN KLDAIVTLGS DLSSVLAIGG YPGINVPAGY DSGGVPYGIS FGGLRFSEPK LIEIAFAFEQ
501: ATLIRKPPKF IA

Arabidopsis Description

Amidase family protein [Source:TAIR;Acc:AT4G34880]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.