Factsheet for TraesCS2B01G037500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid

Predictor Summary:

plastid 2
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0183300-01	Rice	cytosol	65.48	75.63
TraesCS2B01G037200.1	Wheat	plastid	55.07	64.63
TraesCS2B01G037100.1	Wheat	golgi	88.49	63.58
TraesCS2B01G036100.1	Wheat	cytosol	33.42	60.4
TraesCS2B01G036000.1	Wheat	cytosol	46.3	60.14
TraesCS2B01G035800.1	Wheat	vacuole	78.9	59.14
PGSC0003DMT400004114	Potato	plastid	23.56	58.5
VIT_03s0038g01970.t01	Wine grape	cytosol	29.32	51.69
Os06t0271300-00	Rice	cytosol, plastid	74.79	50.74
CDY28936	Canola	plastid	53.97	50.0
TraesCS2B01G035200.1	Wheat	cytosol	64.93	48.37
TraesCS2B01G037400.1	Wheat	nucleus	64.38	46.72
CDX75471	Canola	cytosol	25.21	46.46
TraesCS2B01G035900.1	Wheat	extracellular, golgi	63.29	45.92
KRH42703	Soybean	cytosol, extracellular	11.23	45.56
KRH42704	Soybean	cytosol	25.48	44.29
CDY51679	Canola	endoplasmic reticulum, vacuole	54.52	42.43
VIT_03s0038g02010.t01	Wine grape	extracellular, vacuole	54.52	41.98
TraesCS1B01G448000.1	Wheat	extracellular, vacuole	59.18	41.78
CDX69095	Canola	cytosol	43.56	40.66
VIT_03s0038g02040.t01	Wine grape	extracellular	56.44	40.08
VIT_03s0038g02030.t01	Wine grape	mitochondrion	50.96	39.91
Bra022128.1-P	Field mustard	endoplasmic reticulum, vacuole	53.97	39.64
Solyc01g111220.2.1	Tomato	extracellular	55.07	39.26
VIT_03s0038g02020.t01	Wine grape	mitochondrion	27.12	38.52
KRH42701	Soybean	cytosol	51.51	38.37
AT4G34880.2	Thale cress	vacuole	53.15	37.89
Solyc11g071550.1.1	Tomato	extracellular, nucleus	52.33	37.75
PGSC0003DMT400048145	Potato	extracellular	52.05	37.62
PGSC0003DMT400004112	Potato	extracellular	55.62	37.32
Bra011569.1-P	Field mustard	cytosol	36.44	36.54
PGSC0003DMT400005106	Potato	extracellular	42.19	36.32
TraesCS2B01G037800.1	Wheat	extracellular	28.49	35.37
KRH58810	Soybean	nucleus	49.86	35.14
GSMUA_Achr2P11220_001	Banana	endoplasmic reticulum	63.01	32.39
VIT_03s0038g01990.t01	Wine grape	nucleus, peroxisome, plastid	51.78	31.66
CDX75470	Canola	plastid	23.56	28.29
VIT_03s0038g02000.t01	Wine grape	plasma membrane	53.7	19.1

Protein Annotations

EnsemblPlants:TraesCS2B01G037500.1	EnsemblPlantsGene:TraesCS2B01G037500	Gene3D:3.90.1300.10	InterPro:AS_sf	InterPro:Amidase_dom	InterPro:IPR036928
KEGG:00970+6.3.5.7	PANTHER:PTHR42678	PANTHER:PTHR42678:SF9	PFAM:PF01425	SEG:seg	SUPFAM:SSF75304
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr2B:-:17495237..17497760

Molecular Weight (calculated)

38911.0 Da

IEP (calculated)

9.082

GRAVY (calculated)

-0.056

Length

365 amino acids

Sequence
(BLAST)

001: MDEWANFRSF SGGGWSARGG KGGNPYVLSA TPCGLSTGSA IAAAASMTAV TLGTETDGSI LCPASLNSVV GIKPMVGLTS RAGVIPTTPR QASTGWHNKD
101: RPICRTVAHA VHVLDAIVGY DPVDAPATMA ASKYIPPGGY TQFLKKDGLR GKRIGVPNGF FNFPNGNVQQ MVYTQHLNTM RKQGAIVIEK LDIENLSVLL
201: DSQNNGQQIA LPAEFKLSLN SYLSNVLHSP VRSLAEIIAF NNAHPVEENM KENGQTVFLV AENTTGIGAL ERAAIRQLNK LSANGLKKLM REHELDAIMT
301: PNNAASSVLA IDGMPAITVP AGYGKQGVPF GLCFGGLRGY EPRLIEMAYA FEQVTMVRKP PTFLP

Best Arabidopsis Sequence Match ( AT4G34880.1 )
(BLAST)

001: MVALRFFFFS SLLILLILSQ ALIMSVGSAS QIRLSSTFSI QEATIEDIRV AFNEKRLTSK QLVELYLEAI SKLNPILHAV IETNPDALIQ AEIADRERDL
101: KNTTKLPILH GVPVLLKDSI STKDKLNTTA GSFALLGSVV ARDAGVVKRL RESGAVILGK ASLSEWAHFR SFSIPDGWSA PSQNSVVGIK PSVGLTSRAG
201: VVPISLRQDS IGPICRTVSD AVHLLDAIVG YDPLDEATKT ASEFIPEGGY KQFLTTSGLK GKRLGIVMKH SSLLDHHIKT LRREGAIVIN NLTIPNIEVI
301: VGGTDSGEEI ALLAEFKMSL NAYLKELVKS PVRSLADVIA YNEEFAEQEK VKEWGQEVFL TAEATSGMGE KEKTALQKMK ELSRNGIEKL IEENKLDAIV
401: TLGSDLSSVL AIGGYPGINV PAGYDSGGVP YGISFGGLRF SEPKLIEIAF AFEQATLIRK PPKFIA

Arabidopsis Description

Amidase family protein [Source:TAIR;Acc:AT4G34880]
SUBAcon: [vacuole,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.