Factsheet for VIT_03s0038g02040.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plasma membrane 5
extracellular 7
endoplasmic reticulum 5
vacuole 5
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_03s0038g02030.t01	Wine grape	mitochondrion	70.23	77.47
VIT_03s0038g02010.t01	Wine grape	extracellular, vacuole	70.43	76.37
CDY28936	Canola	plastid	55.64	72.59
Solyc01g111220.2.1	Tomato	extracellular	69.84	70.12
Bra011569.1-P	Field mustard	cytosol	48.25	68.13
CDY51679	Canola	endoplasmic reticulum, vacuole	61.28	67.16
Bra022128.1-P	Field mustard	endoplasmic reticulum, vacuole	64.01	66.2
PGSC0003DMT400004112	Potato	extracellular	69.07	65.26
AT4G34880.2	Thale cress	vacuole	64.2	64.45
CDX69095	Canola	cytosol	48.64	63.94
Zm00001d004287_P001	Maize	cytosol	37.74	61.78
VIT_03s0038g02020.t01	Wine grape	mitochondrion	30.54	61.09
TraesCSU01G233300.1	Wheat	extracellular, golgi	38.52	60.55
TraesCS2B01G037800.1	Wheat	extracellular	34.63	60.54
EES11861	Sorghum	extracellular, golgi, plasma membrane	60.31	60.43
VIT_03s0038g01970.t01	Wine grape	cytosol	24.32	60.39
CDX75471	Canola	cytosol	22.96	59.6
HORVU5Hr1G087780.4	Barley	extracellular, golgi	58.56	59.37
TraesCSU01G008400.1	Wheat	extracellular, golgi	58.56	59.25
TraesCS2B01G035200.1	Wheat	cytosol	56.42	59.18
TraesCS2A01G025200.1	Wheat	extracellular	58.75	59.1
TraesCS3D01G364700.2	Wheat	extracellular, vacuole	57.98	59.01
KXG36216	Sorghum	cytosol	56.61	58.91
TraesCS2B01G037400.1	Wheat	nucleus	57.39	58.65
TraesCS2D01G026900.1	Wheat	extracellular, golgi	57.0	58.48
TraesCS2D01G026300.1	Wheat	cytosol	57.2	58.33
TraesCS2A01G064000.1	Wheat	extracellular, vacuole	57.39	58.19
EER97209	Sorghum	extracellular	57.59	58.04
TraesCS2B01G035900.1	Wheat	extracellular, golgi	56.42	57.65
TraesCS2B01G037100.1	Wheat	golgi	56.81	57.48
TraesCS2B01G037200.1	Wheat	plastid	34.63	57.23
EER99375	Sorghum	extracellular	56.61	57.06
Zm00001d004288_P001	Maize	extracellular	21.4	56.99
TraesCS2A01G025000.1	Wheat	golgi, plasma membrane, vacuole	56.23	56.78
TraesCS2D01G027000.1	Wheat	golgi, plasma membrane, vacuole	56.23	56.78
HORVU2Hr1G004020.1	Barley	cytosol, mitochondrion	6.61	56.67
TraesCS2D01G027200.1	Wheat	cytosol	58.17	56.52
TraesCS1B01G448000.1	Wheat	extracellular, vacuole	56.81	56.48
TraesCS2B01G037500.1	Wheat	cytosol, plastid	40.08	56.44
TraesCS1D01G425500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	56.61	56.29
HORVU1Hr1G091420.1	Barley	cytosol, plastid	43.77	54.88
TraesCSU01G211000.1	Wheat	cytosol	28.79	54.81
TraesCS2D01G062200.1	Wheat	cytosol	33.27	54.81
TraesCS2B01G036000.1	Wheat	cytosol	29.96	54.8
TraesCS1A01G417900.1	Wheat	endoplasmic reticulum, golgi	52.53	54.66
TraesCS2B01G035800.1	Wheat	vacuole	51.75	54.62
KXG38675	Sorghum	endoplasmic reticulum, vacuole	57.59	54.51
CDX75470	Canola	plastid	31.71	53.62
EES10484	Sorghum	golgi, vacuole	51.36	53.44
HORVU2Hr1G003810.1	Barley	extracellular, mitochondrion	26.65	53.31
TraesCS2B01G036100.1	Wheat	cytosol	20.62	52.48
HORVU2Hr1G003980.8	Barley	cytosol	38.91	51.95
VIT_03s0038g01990.t01	Wine grape	nucleus, peroxisome, plastid	52.92	45.56
GSMUA_Achr2P11220_001	Banana	endoplasmic reticulum	57.98	41.97
HORVU2Hr1G004030.1	Barley	cytosol	11.87	41.78
HORVU2Hr1G003990.5	Barley	cytosol	40.08	39.24
EES11858	Sorghum	extracellular	6.03	38.75
VIT_03s0038g02000.t01	Wine grape	plasma membrane	76.65	38.4
HORVU1Hr1G091390.1	Barley	cytosol, extracellular	10.51	33.13

Protein Annotations

KEGG:00970+6.3.5.7	EntrezGene:100245248	wikigene:100245248	Gene3D:3.90.1300.10	MapMan:35.1	EMBL:AM450466
InterPro:AS_sf	InterPro:Amidase_dom	ProteinID:CAN80909	ProteinID:CAN80909.1	ProteinID:CCB60636	ProteinID:CCB60636.1
UniProt:F6I120	EMBL:FN596508	InterPro:IPR036928	EntrezGene:LOC100245248	wikigene:LOC100245248	PFAM:PF01425
PANTHER:PTHR42678	PANTHER:PTHR42678:SF9	SUPFAM:SSF75304	SignalP:SignalP-noTM	UniParc:UPI00015C8FAD	ArrayExpress:VIT_03s0038g02040
EnsemblPlantsGene:VIT_03s0038g02040	EnsemblPlants:VIT_03s0038g02040.t01	RefSeq:XP_002277463	RefSeq:XP_002277463.2	RefSeq:XP_019074451.1	SEG:seg

Description

No Description!

Coordinates

chr3:+:1406571..1408542

Molecular Weight (calculated)

54922.3 Da

IEP (calculated)

9.111

GRAVY (calculated)

0.091

Length

514 amino acids

Sequence
(BLAST)

001: MSTHSHFLIL LLALLSLGSY TIRGQGHGFY IKEASVDDLH TAFLQNKLTS RQLVEFYLGE IFRLSPLLHG VIEVNPDALY QADKADRERK AKSPVSRSVL
101: HGIPILLKDN IGTKDKLNTT AGSFALLKSV VPRDAGVVMK LRKAGAIILG KASLSEWANF RSLNAPPGWS ARGGQGLNPY VLSATPCGSS SGSAISVAAN
201: LVAVSLGTET DGSILCPASF NSVVGIKPTV GLTSRAGVVP VSPRQDTIGP ICRTVLDAVQ VLDAIVGFDY NDAEATREAS KYIPYGGYKQ FLKPYGLKGK
301: RLGIVRNPFF TTGSGAALTQ AFEHHFYTLR QEGAVLVDDL EIANINVILN ATSSGEATAL LAEFKLSLNS YLKDLVASPV RSLADVIAFN QKFSDLEMIK
401: EFGQDIFLAA QATNGIGDVE KKALSNLARL TRDGFEKLMI ENKLDALVTP GSDVAPVLAI GGFPGISVPA GYDYKGVPFG ICFGGLKGSE PKLIEIAYGF
501: EQATKIRKPP SFKP

Best Arabidopsis Sequence Match ( AT4G34880.2 )
(BLAST)

001: MVALRFFFFS SLLILLILSQ ALIMSVGSAS QIRLSSTFSI QEATIEDIRV AFNEKRLTSK QLVELYLEAI SKLNPILHAV IETNPDALIQ AEIADRERDL
101: KNTTKLPILH GVPVLLKDSI STKDKLNTTA GSFALLGSVV ARDAGVVKRL RESGAVILGK ASLSEWAHFR SFSIPDGWSA RGLQGKNPYV LSANPSGSSS
201: GSAISVTANL VAVSLGTETD GSILSPASQN SVVGIKPSVG LTSRAGVVPI SLRQDSIGPI CRTVSDAVHL LDAIVGYDPL DEATKTASEF IPEGGYKQFL
301: TTSGLKGKRL GIVMKHSSLL DHHIKTLRRE GAIVINNLTI PNIEVIVGGT DSGEEIALLA EFKMSLNAYL KELVKSPVRS LADVIAYNEE FAEQEKVKEW
401: GQEVFLTAEA TSGMGEKEKT ALQKMKELSR NGIEKLIEEN KLDAIVTLGS DLSSVLAIGG YPGINVPAGY DSGGVPYGIS FGGLRFSEPK LIEIAFAFEQ
501: ATLIRKPPKF IA

Arabidopsis Description

Amidase family protein [Source:TAIR;Acc:AT4G34880]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.