Factsheet for TraesCS2A01G025200.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plasma membrane 5
extracellular 6
endoplasmic reticulum 4
vacuole 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G037800.1	Wheat	extracellular	49.9	86.73
TraesCS2A01G025000.1	Wheat	golgi, plasma membrane, vacuole	79.84	80.16
Os04t0183300-01	Rice	cytosol	47.75	77.22
TraesCS2A01G064000.1	Wheat	extracellular, vacuole	67.91	68.44
Os06t0271300-00	Rice	cytosol, plastid	67.32	63.94
CDY28936	Canola	plastid	48.73	63.2
PGSC0003DMT400004114	Potato	plastid	17.61	61.22
Bra011569.1-P	Field mustard	cytosol	42.27	59.34
VIT_03s0038g02030.t01	Wine grape	mitochondrion	53.62	58.8
VIT_03s0038g02040.t01	Wine grape	extracellular	59.1	58.75
VIT_03s0038g02010.t01	Wine grape	extracellular, vacuole	54.21	58.44
Bra022128.1-P	Field mustard	endoplasmic reticulum, vacuole	55.97	57.55
HORVU2Hr1G003990.5	Barley	cytosol	58.71	57.14
CDY51679	Canola	endoplasmic reticulum, vacuole	52.25	56.93
KRH42701	Soybean	cytosol	54.21	56.53
Solyc01g111220.2.1	Tomato	extracellular	56.36	56.25
TraesCS1A01G417900.1	Wheat	endoplasmic reticulum, golgi	54.21	56.07
CDX69095	Canola	cytosol	42.86	56.01
AT4G34880.2	Thale cress	vacuole	55.77	55.66
Solyc11g071550.1.1	Tomato	extracellular, nucleus	53.82	54.35
PGSC0003DMT400005106	Potato	extracellular	44.42	53.54
PGSC0003DMT400048145	Potato	extracellular	52.84	53.47
KRH58810	Soybean	nucleus	53.82	53.09
PGSC0003DMT400004112	Potato	extracellular	56.36	52.94
VIT_03s0038g01970.t01	Wine grape	cytosol	20.35	50.24
CDX75470	Canola	plastid	29.35	49.34
KRH42703	Soybean	cytosol, extracellular	8.61	48.89
KRH42704	Soybean	cytosol	19.77	48.1
CDX75471	Canola	cytosol	18.4	47.47
VIT_03s0038g02020.t01	Wine grape	mitochondrion	23.87	47.47
GSMUA_Achr2P11220_001	Banana	endoplasmic reticulum	59.88	43.1
VIT_03s0038g01990.t01	Wine grape	nucleus, peroxisome, plastid	44.23	37.86
VIT_03s0038g02000.t01	Wine grape	plasma membrane	57.93	28.85

Protein Annotations

EnsemblPlants:TraesCS2A01G025200.1	EnsemblPlantsGene:TraesCS2A01G025200	Gene3D:3.90.1300.10	InterPro:AS_sf	InterPro:Amidase_dom	InterPro:IPR036928
KEGG:00970+6.3.5.7	PANTHER:PTHR42678	PFAM:PF01425	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF75304
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr2A:+:11989882..11994420

Molecular Weight (calculated)

53540.5 Da

IEP (calculated)

7.977

GRAVY (calculated)

0.150

Length

511 amino acids

Sequence
(BLAST)

001: MPRPLLAVAA MVLVLAAAGA HGFEIEEATL ASIQLGFNNG SLTSVELVRF YLDRIRGLNP LLRAVIEVNP DALRQAARAD AERRSSSSGK CVTAGGPLHG
101: VPVLLKDNIA TRDALNTTAG SFALLGSVAR RDAGVVRRLR RAGAVVLGKA NMDEWANFRS LAGTDGWSAR GGQARNPYVL SASPCGSSTG SAIAAAASMA
201: AVTLGTETDG SILCPASLNS VVGIKPTLGL TSRAGVVPIT PRQDTVGPIC RTVTDVVHVL DAIVGYDALD AAATSTASKY IPDGGYTQFL KKDGLNGKRI
301: GIPNGFFNYA NGTVQHTVYQ QHIDTMRKQG AIVVEDLDIA NLSVILDSLN NGQEIALAAE FKLSLNAYLS GLSYSPVRTL AEIIAFNDAH PVEEKMKEIG
401: QIIFLVAENT TGIGAVERAA VSQLNKLSAD GLEKLMREHK LDAIVTPNSA ASPVLAIGGM PGITVPAGYG AMGVPFGLSF GGLKGYEPRL IEMSYAFEQV
501: TTVRKTPTFL P

Best Arabidopsis Sequence Match ( AT4G34880.2 )
(BLAST)

001: MVALRFFFFS SLLILLILSQ ALIMSVGSAS QIRLSSTFSI QEATIEDIRV AFNEKRLTSK QLVELYLEAI SKLNPILHAV IETNPDALIQ AEIADRERDL
101: KNTTKLPILH GVPVLLKDSI STKDKLNTTA GSFALLGSVV ARDAGVVKRL RESGAVILGK ASLSEWAHFR SFSIPDGWSA RGLQGKNPYV LSANPSGSSS
201: GSAISVTANL VAVSLGTETD GSILSPASQN SVVGIKPSVG LTSRAGVVPI SLRQDSIGPI CRTVSDAVHL LDAIVGYDPL DEATKTASEF IPEGGYKQFL
301: TTSGLKGKRL GIVMKHSSLL DHHIKTLRRE GAIVINNLTI PNIEVIVGGT DSGEEIALLA EFKMSLNAYL KELVKSPVRS LADVIAYNEE FAEQEKVKEW
401: GQEVFLTAEA TSGMGEKEKT ALQKMKELSR NGIEKLIEEN KLDAIVTLGS DLSSVLAIGG YPGINVPAGY DSGGVPYGIS FGGLRFSEPK LIEIAFAFEQ
501: ATLIRKPPKF IA

Arabidopsis Description

Amidase family protein [Source:TAIR;Acc:AT4G34880]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.