Factsheet for TraesCS2A01G064000.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole, extracellular

Predictor Summary:

plasma membrane 4
extracellular 5
endoplasmic reticulum 4
vacuole 5
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G364700.2	Wheat	extracellular, vacuole	93.29	93.66
TraesCS2D01G062200.1	Wheat	cytosol	56.61	91.99
HORVU5Hr1G087780.4	Barley	extracellular, golgi	87.97	87.97
Os04t0184100-01	Rice	extracellular	70.61	71.03
Os04t0183500-01	Rice	extracellular, plasma membrane	69.82	70.38
TraesCS2A01G025200.1	Wheat	extracellular	68.44	67.91
Os04t0182875-00	Rice	extracellular	25.25	67.02
TraesCS2A01G025000.1	Wheat	golgi, plasma membrane, vacuole	66.08	65.82
Zm00001d004288_P001	Maize	extracellular	24.46	64.25
Os04t0184500-00	Rice	cytosol, plastid	22.68	64.25
CDY28936	Canola	plastid	47.53	61.17
VIT_03s0038g02030.t01	Wine grape	mitochondrion	53.85	58.58
PGSC0003DMT400004114	Potato	plastid	16.96	58.5
Bra011569.1-P	Field mustard	cytosol	41.81	58.24
VIT_03s0038g02040.t01	Wine grape	extracellular	58.19	57.39
Bra022128.1-P	Field mustard	endoplasmic reticulum, vacuole	55.03	56.14
VIT_03s0038g02010.t01	Wine grape	extracellular, vacuole	52.47	56.12
CDY51679	Canola	endoplasmic reticulum, vacuole	51.87	56.08
KRH42701	Soybean	cytosol	53.45	55.31
TraesCS1A01G417900.1	Wheat	endoplasmic reticulum, golgi	53.25	54.66
Solyc01g111220.2.1	Tomato	extracellular	54.44	53.91
CDX69095	Canola	cytosol	41.42	53.71
Solyc11g071550.1.1	Tomato	extracellular, nucleus	53.06	53.16
PGSC0003DMT400005106	Potato	extracellular	44.38	53.07
AT4G34880.2	Thale cress	vacuole	53.25	52.73
KRH58810	Soybean	nucleus	53.65	52.51
KRH42703	Soybean	cytosol, extracellular	9.27	52.22
PGSC0003DMT400048145	Potato	extracellular	51.48	51.68
PGSC0003DMT400004112	Potato	extracellular	54.44	50.74
VIT_03s0038g01970.t01	Wine grape	cytosol	20.51	50.24
CDX75470	Canola	plastid	28.99	48.36
KRH42704	Soybean	cytosol	19.92	48.1
CDX75471	Canola	cytosol	17.95	45.96
VIT_03s0038g02020.t01	Wine grape	mitochondrion	21.89	43.19
GSMUA_Achr2P11220_001	Banana	endoplasmic reticulum	55.62	39.72
Os01t0115200-00	Rice	mitochondrion, plastid	12.03	39.1
VIT_03s0038g01990.t01	Wine grape	nucleus, peroxisome, plastid	43.98	37.35
VIT_03s0038g02000.t01	Wine grape	plasma membrane	56.8	28.07

Protein Annotations

EnsemblPlants:TraesCS2A01G064000.1	EnsemblPlantsGene:TraesCS2A01G064000	Gene3D:3.90.1300.10	InterPro:AS_sf	InterPro:Amidase_dom	InterPro:IPR036928
KEGG:00970+6.3.5.7	PANTHER:PTHR42678	PANTHER:PTHR42678:SF3	PFAM:PF01425	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF75304	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr2A:-:28674885..28677039

Molecular Weight (calculated)

53458.3 Da

IEP (calculated)

8.559

GRAVY (calculated)

0.069

Length

507 amino acids

Sequence
(BLAST)

001: MASLQLQAVA AVLALVAAGA GAAHGFEFHE ATVEAIQLGF SNGTLTSTAL VRFYLDQIGR LNPLLRAVIE VNPDALRQAQ HADAERRRGS GTATGSLRGV
101: PVLLKDNIAT RDALNTTAGS LALLGSVVKR DAGVAARLRR AGALVLGKAS LSEWANFRPV EAGWSARGGQ ARNPYVLSST PCGSSAGSGV AAAANMAAVT
201: LGTETDGSIL CPSSFNSVVG IKPTLGLTSR AGVVPITPLQ DTVGPMCRTV SDAVHVLDAI VGYDTQDAAA TGAASKYIPH GGYTQFLKKN GLKGKRIGVP
301: NGFFQGYDQT QLNTYKQHLA TMRKLGAVVI EKLDVAANLT ALLVEIYSEG IAMQAEFKLS INAYLADLVY SPVHSLADII AFNNNHPVEE RLKDFGQPDL
401: IAAQSTNGIG PVERAAIRRL KELNTNGLEK LMMEHQLDAI VAPNSDISSL LAISGHPGIV VPAGYDEKGF PFGICFGGLQ GYEPRLIEMA YSFEQATKVR
501: RPPMFKP

Best Arabidopsis Sequence Match ( AT4G34880.1 )
(BLAST)

001: MVALRFFFFS SLLILLILSQ ALIMSVGSAS QIRLSSTFSI QEATIEDIRV AFNEKRLTSK QLVELYLEAI SKLNPILHAV IETNPDALIQ AEIADRERDL
101: KNTTKLPILH GVPVLLKDSI STKDKLNTTA GSFALLGSVV ARDAGVVKRL RESGAVILGK ASLSEWAHFR SFSIPDGWSA PSQNSVVGIK PSVGLTSRAG
201: VVPISLRQDS IGPICRTVSD AVHLLDAIVG YDPLDEATKT ASEFIPEGGY KQFLTTSGLK GKRLGIVMKH SSLLDHHIKT LRREGAIVIN NLTIPNIEVI
301: VGGTDSGEEI ALLAEFKMSL NAYLKELVKS PVRSLADVIA YNEEFAEQEK VKEWGQEVFL TAEATSGMGE KEKTALQKMK ELSRNGIEKL IEENKLDAIV
401: TLGSDLSSVL AIGGYPGINV PAGYDSGGVP YGISFGGLRF SEPKLIEIAF AFEQATLIRK PPKFIA

Arabidopsis Description

Amidase family protein [Source:TAIR;Acc:AT4G34880]
SUBAcon: [vacuole,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.