Factsheet for TraesCS3D01G364700.2

Subcellular Localization

min:

: max

Winner_takes_all: vacuole, extracellular

Predictor Summary:

plasma membrane 4
extracellular 5
endoplasmic reticulum 4
vacuole 5
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G064000.1	Wheat	extracellular, vacuole	93.66	93.29
TraesCS2D01G062200.1	Wheat	cytosol	57.03	92.31
TraesCS2D01G026300.1	Wheat	cytosol	89.11	89.29
HORVU5Hr1G087780.4	Barley	extracellular, golgi	88.71	88.36
TraesCS2D01G026900.1	Wheat	extracellular, golgi	80.79	81.44
TraesCS2D01G027200.1	Wheat	cytosol	81.19	77.5
Os04t0184100-01	Rice	extracellular	70.69	70.83
Os04t0183500-01	Rice	extracellular, plasma membrane	70.1	70.38
Zm00001d004288_P001	Maize	extracellular	25.74	67.36
Os04t0182875-00	Rice	extracellular	25.35	67.02
Os04t0184500-00	Rice	cytosol, plastid	23.37	65.92
TraesCS2D01G027000.1	Wheat	golgi, plasma membrane, vacuole	65.94	65.42
CDY28936	Canola	plastid	48.12	61.68
PGSC0003DMT400004114	Potato	plastid	17.23	59.18
Bra011569.1-P	Field mustard	cytosol	42.57	59.07
VIT_03s0038g02030.t01	Wine grape	mitochondrion	54.26	58.8
VIT_03s0038g02040.t01	Wine grape	extracellular	59.01	57.98
CDY51679	Canola	endoplasmic reticulum, vacuole	52.67	56.72
Bra022128.1-P	Field mustard	endoplasmic reticulum, vacuole	55.45	56.34
VIT_03s0038g02010.t01	Wine grape	extracellular, vacuole	52.67	56.12
TraesCS1D01G425500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	56.83	55.51
KRH42701	Soybean	cytosol	53.66	55.31
Solyc01g111220.2.1	Tomato	extracellular	55.25	54.49
CDX69095	Canola	cytosol	41.78	53.96
PGSC0003DMT400005106	Potato	extracellular	44.95	53.54
Solyc11g071550.1.1	Tomato	extracellular, nucleus	53.07	52.96
AT4G34880.2	Thale cress	vacuole	53.66	52.93
KRH58810	Soybean	nucleus	54.26	52.9
PGSC0003DMT400048145	Potato	extracellular	52.28	52.28
KRH42703	Soybean	cytosol, extracellular	9.31	52.22
PGSC0003DMT400004112	Potato	extracellular	55.25	51.29
VIT_03s0038g01970.t01	Wine grape	cytosol	20.59	50.24
CDX75470	Canola	plastid	29.31	48.68
KRH42704	Soybean	cytosol	20.2	48.57
CDX75471	Canola	cytosol	18.02	45.96
VIT_03s0038g02020.t01	Wine grape	mitochondrion	22.57	44.36
GSMUA_Achr2P11220_001	Banana	endoplasmic reticulum	56.04	39.86
Os01t0115200-00	Rice	mitochondrion, plastid	12.08	39.1
VIT_03s0038g01990.t01	Wine grape	nucleus, peroxisome, plastid	43.76	37.02
VIT_03s0038g02000.t01	Wine grape	plasma membrane	57.23	28.17

Protein Annotations

EnsemblPlants:TraesCS3D01G364700.2	EnsemblPlantsGene:TraesCS3D01G364700	Gene3D:3.90.1300.10	InterPro:AS_sf	InterPro:Amidase_dom	InterPro:IPR036928
KEGG:00970+6.3.5.7	PANTHER:PTHR42678	PANTHER:PTHR42678:SF3	PFAM:PF01425	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF75304	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr3D:-:478537990..478540009

Molecular Weight (calculated)

53402.3 Da

IEP (calculated)

9.180

GRAVY (calculated)

0.061

Length

505 amino acids

Sequence
(BLAST)

001: MASLQLQAVA AVLALVAGAG AAHSFEFHEA TVEAIQLGFS NGTLTSTALV RFYLDQIGRL NPLLHAVIEV NPDALRQAKH ADAERRRGTA TGSLRGVPVL
101: LKDNIATRDA LNTTAGSLAL LGSVVKRDAG VAARLRRAGA VVLGKASLSE WANFRPVEAG WSARGGQARN PYVLSSTPCG SSAGSGVAVA ANMAAVTLGT
201: ETDGSILCPS SFNSVVGIKP TLGLTSRAGV VPITPLQDTV GPMCRTVSDA VHVLDAIVGY DAQDAAATGA ASKYIPHGGY TQFLKKNGLK GKRIGVPNGF
301: FQGYDQTQLN TYKQHLATMR KLGAVVIEKL DVAANLTALF VEIYSKEGIA MQAEFKLSIN AYLADLVYSP VHSLADIIAF NNKHPVEERL KDFGQPDLIA
401: AQSTNGIGPV ERGAIRRLKE LNANGLEKLM MERQLDAVVA PNSDISSLLA INGHPGIVVP AGYDEKGFPF GICFGGLQGY EPRLIEMAYS FEQATKVRRP
501: PMFKP

Best Arabidopsis Sequence Match ( AT4G34880.1 )
(BLAST)

001: MVALRFFFFS SLLILLILSQ ALIMSVGSAS QIRLSSTFSI QEATIEDIRV AFNEKRLTSK QLVELYLEAI SKLNPILHAV IETNPDALIQ AEIADRERDL
101: KNTTKLPILH GVPVLLKDSI STKDKLNTTA GSFALLGSVV ARDAGVVKRL RESGAVILGK ASLSEWAHFR SFSIPDGWSA PSQNSVVGIK PSVGLTSRAG
201: VVPISLRQDS IGPICRTVSD AVHLLDAIVG YDPLDEATKT ASEFIPEGGY KQFLTTSGLK GKRLGIVMKH SSLLDHHIKT LRREGAIVIN NLTIPNIEVI
301: VGGTDSGEEI ALLAEFKMSL NAYLKELVKS PVRSLADVIA YNEEFAEQEK VKEWGQEVFL TAEATSGMGE KEKTALQKMK ELSRNGIEKL IEENKLDAIV
401: TLGSDLSSVL AIGGYPGINV PAGYDSGGVP YGISFGGLRF SEPKLIEIAF AFEQATLIRK PPKFIA

Arabidopsis Description

Amidase family protein [Source:TAIR;Acc:AT4G34880]
SUBAcon: [vacuole,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.