CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole, endoplasmic reticulum

Predictor Summary:

plasma membrane 5
extracellular 5
endoplasmic reticulum 6
vacuole 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY28936	Canola	plastid	78.68	93.65
CDX69095	Canola	cytosol	63.33	75.96
CDX75471	Canola	cytosol	28.78	68.18
VIT_03s0038g02010.t01	Wine grape	extracellular, vacuole	66.1	65.4
CDX75470	Canola	plastid	40.72	62.83
PGSC0003DMT400004114	Potato	plastid	19.62	62.59
VIT_03s0038g02030.t01	Wine grape	mitochondrion	62.05	62.45
VIT_03s0038g02040.t01	Wine grape	extracellular	67.16	61.28
KRH42703	Soybean	cytosol, extracellular	11.73	61.11
TraesCSU01G233300.1	Wheat	extracellular, golgi	39.45	56.57
KRH42701	Soybean	cytosol	59.06	56.53
TraesCS2B01G037200.1	Wheat	plastid	37.31	56.27
PGSC0003DMT400048145	Potato	extracellular	59.49	55.25
KRH58810	Soybean	nucleus	60.55	54.83
Solyc11g071550.1.1	Tomato	extracellular, nucleus	58.85	54.55
TraesCS2B01G037500.1	Wheat	cytosol, plastid	42.43	54.52
TraesCS2D01G026900.1	Wheat	extracellular, golgi	58.21	54.49
VIT_03s0038g02020.t01	Wine grape	mitochondrion	29.85	54.47
TraesCS2B01G037400.1	Wheat	nucleus	58.42	54.47
Solyc01g111220.2.1	Tomato	extracellular	59.28	54.3
TraesCS2B01G035900.1	Wheat	extracellular, golgi	57.78	53.88
Zm00001d004287_P001	Maize	cytosol	36.03	53.82
EES11861	Sorghum	extracellular, golgi, plasma membrane	58.85	53.8
PGSC0003DMT400005106	Potato	extracellular	48.61	53.77
TraesCS2B01G035200.1	Wheat	cytosol	55.86	53.47
KXG36216	Sorghum	cytosol	56.29	53.44
TraesCS2B01G037100.1	Wheat	golgi	57.57	53.15
TraesCSU01G008400.1	Wheat	extracellular, golgi	57.57	53.15
VIT_03s0038g01970.t01	Wine grape	cytosol	23.45	53.14
HORVU5Hr1G087780.4	Barley	extracellular, golgi	57.36	53.06
EER99375	Sorghum	extracellular	57.36	52.75
TraesCS2B01G037800.1	Wheat	extracellular	33.05	52.72
TraesCS3D01G364700.2	Wheat	extracellular, vacuole	56.72	52.67
TraesCS2D01G027000.1	Wheat	golgi, plasma membrane, vacuole	57.14	52.65
TraesCS2A01G025200.1	Wheat	extracellular	56.93	52.25
TraesCS2A01G025000.1	Wheat	golgi, plasma membrane, vacuole	56.5	52.06
TraesCS2A01G064000.1	Wheat	extracellular, vacuole	56.08	51.87
PGSC0003DMT400004112	Potato	extracellular	59.91	51.65
EER97209	Sorghum	extracellular	56.08	51.57
TraesCS2D01G026300.1	Wheat	cytosol	55.22	51.39
TraesCS2D01G062200.1	Wheat	cytosol	33.48	50.32
TraesCS2D01G027200.1	Wheat	cytosol	56.5	50.09
EES10484	Sorghum	golgi, vacuole	52.67	50.0
TraesCS2B01G035800.1	Wheat	vacuole	51.81	49.9
Zm00001d004288_P001	Maize	extracellular	20.47	49.74
TraesCS1B01G448000.1	Wheat	extracellular, vacuole	54.8	49.71
TraesCS1D01G425500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	54.58	49.52
HORVU1Hr1G091420.1	Barley	cytosol, plastid	43.28	49.51
TraesCS2B01G036000.1	Wheat	cytosol	29.64	49.47
KRH42704	Soybean	cytosol	21.96	49.05
HORVU2Hr1G004020.1	Barley	cytosol, mitochondrion	6.18	48.33
TraesCSU01G211000.1	Wheat	cytosol	27.72	48.15
TraesCS1A01G417900.1	Wheat	endoplasmic reticulum, golgi	50.53	47.98
KXG38675	Sorghum	endoplasmic reticulum, vacuole	54.8	47.33
HORVU2Hr1G003980.8	Barley	cytosol	38.59	47.01
HORVU2Hr1G003810.1	Barley	extracellular, mitochondrion	25.59	46.69
TraesCS2B01G036100.1	Wheat	cytosol	20.04	46.53
VIT_03s0038g01990.t01	Wine grape	nucleus, peroxisome, plastid	52.03	40.87
HORVU2Hr1G004030.1	Barley	cytosol	11.73	37.67
GSMUA_Achr2P11220_001	Banana	endoplasmic reticulum	56.29	37.18
HORVU2Hr1G003990.5	Barley	cytosol	41.15	36.76
EES11858	Sorghum	extracellular	5.76	33.75
VIT_03s0038g02000.t01	Wine grape	plasma membrane	67.38	30.8
Os11t0123033-01	Rice	plastid	12.79	29.27
HORVU1Hr1G091390.1	Barley	cytosol, extracellular	8.32	23.93

Protein Annotations

KEGG:00970+6.3.5.7	Gene3D:3.90.1300.10	MapMan:35.1	GO:A0A078IQK1	UniProt:A0A078IQK1	InterPro:AS_sf
InterPro:Amidase_dom	EnsemblPlants:CDY51679	ProteinID:CDY51679	ProteinID:CDY51679.1	EnsemblPlantsGene:GSBRNA2T00004015001	InterPro:IPR036928
PFAM:PF01425	PANTHER:PTHR42678	PANTHER:PTHR42678:SF10	MetaCyc:PWY-5921	SUPFAM:SSF75304	SignalP:SignalP-noTM
UniParc:UPI0004EE21E7	SEG:seg	:	:	:	:

Description

BnaC02g46880DBnaC02g46880D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IQK1]

Coordinates

chrLK033018:+:28488..30706

Molecular Weight (calculated)

50583.2 Da

IEP (calculated)

9.960

GRAVY (calculated)

-0.032

Length

469 amino acids

Sequence
(BLAST)

001: MVALRFILSS SFLLLHLLIT QAQPHSLNKP TSTFSIQEAT VDDIRVAFKE KRLTSKQLVE YYLKAISKLN PTLHAVIETN PDALDNISTK DKLNTTAGSF
101: ALLGSVVPRD AGVVKRLRRS GAVILGKASL SEWANFRSSI PNGWSARGLQ GKNPYVLSAD PLGSSSGSAI SVAANLVAVS LGTETDGSIL APSSQNSVVG
201: IKPSVGLTSR AGVVPISLRQ DSVGPICRRV SDSVHVLDAI VGYDPLDEAT RTASKYIPKG GYKQFLRANG LKGKRLGVVF GSLLDHDIKT LRQEGAIVIE
301: NLTIPYSDSG EMTALLAEFK ISLNAYLKAL VKSPVRSLAD VIAFNKKFAK KEKVKEWGQE VFLEAEATNG MGDKEKEALR TMEEFSRNGI EKLMKENKLD
401: AIVTYGYMLS SVLAVGGYPG ITVPAGYDSE GVPFGISFGG LRFSEPKLIE IAYGFEQATL IRKPPKFKA

Best Arabidopsis Sequence Match ( AT4G34880.2 )
(BLAST)

001: MVALRFFFFS SLLILLILSQ ALIMSVGSAS QIRLSSTFSI QEATIEDIRV AFNEKRLTSK QLVELYLEAI SKLNPILHAV IETNPDALIQ AEIADRERDL
101: KNTTKLPILH GVPVLLKDSI STKDKLNTTA GSFALLGSVV ARDAGVVKRL RESGAVILGK ASLSEWAHFR SFSIPDGWSA RGLQGKNPYV LSANPSGSSS
201: GSAISVTANL VAVSLGTETD GSILSPASQN SVVGIKPSVG LTSRAGVVPI SLRQDSIGPI CRTVSDAVHL LDAIVGYDPL DEATKTASEF IPEGGYKQFL
301: TTSGLKGKRL GIVMKHSSLL DHHIKTLRRE GAIVINNLTI PNIEVIVGGT DSGEEIALLA EFKMSLNAYL KELVKSPVRS LADVIAYNEE FAEQEKVKEW
401: GQEVFLTAEA TSGMGEKEKT ALQKMKELSR NGIEKLIEEN KLDAIVTLGS DLSSVLAIGG YPGINVPAGY DSGGVPYGIS FGGLRFSEPK LIEIAFAFEQ
501: ATLIRKPPKF IA

Arabidopsis Description

Amidase family protein [Source:TAIR;Acc:AT4G34880]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.