Factsheet for TraesCS1A01G417900.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, endoplasmic reticulum

Predictor Summary:

plasma membrane 4
extracellular 4
endoplasmic reticulum 5
vacuole 4
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G425500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	95.55	91.3
TraesCS1B01G448000.1	Wheat	extracellular, vacuole	94.74	90.52
HORVU1Hr1G091420.1	Barley	cytosol, plastid	65.18	78.54
KXG38675	Sorghum	endoplasmic reticulum, vacuole	80.36	73.11
Os10t0155400-00	Rice	mitochondrion	53.85	71.51
PGSC0003DMT400004114	Potato	plastid	17.0	57.14
Bra011569.1-P	Field mustard	cytosol	41.09	55.77
TraesCS2A01G025000.1	Wheat	golgi, plasma membrane, vacuole	57.09	55.4
CDY28936	Canola	plastid	43.72	54.82
TraesCS2A01G025200.1	Wheat	extracellular	56.07	54.21
TraesCS2A01G064000.1	Wheat	extracellular, vacuole	54.66	53.25
VIT_03s0038g01970.t01	Wine grape	cytosol	22.27	53.14
VIT_03s0038g02010.t01	Wine grape	extracellular, vacuole	50.81	52.95
VIT_03s0038g02040.t01	Wine grape	extracellular	54.66	52.53
VIT_03s0038g02030.t01	Wine grape	mitochondrion	48.79	51.72
CDY51679	Canola	endoplasmic reticulum, vacuole	47.98	50.53
Bra022128.1-P	Field mustard	endoplasmic reticulum, vacuole	50.81	50.5
Solyc01g111220.2.1	Tomato	extracellular	52.02	50.2
KRH42701	Soybean	cytosol	49.39	49.8
CDX69095	Canola	cytosol	38.66	48.85
AT4G34880.2	Thale cress	vacuole	50.61	48.83
Solyc11g071550.1.1	Tomato	extracellular, nucleus	49.8	48.62
PGSC0003DMT400005106	Potato	extracellular	41.3	48.11
PGSC0003DMT400048145	Potato	extracellular	48.79	47.72
PGSC0003DMT400004112	Potato	extracellular	52.02	47.24
KRH42704	Soybean	cytosol	20.04	47.14
KRH58810	Soybean	nucleus	49.19	46.91
CDX75470	Canola	plastid	28.74	46.71
VIT_03s0038g02020.t01	Wine grape	mitochondrion	22.67	43.58
CDX75471	Canola	cytosol	15.18	37.88
VIT_03s0038g01990.t01	Wine grape	nucleus, peroxisome, plastid	43.72	36.18
KRH42703	Soybean	cytosol, extracellular	6.07	33.33
VIT_03s0038g02000.t01	Wine grape	plasma membrane	53.64	25.83

Protein Annotations

EnsemblPlants:TraesCS1A01G417900.1	EnsemblPlantsGene:TraesCS1A01G417900	Gene3D:3.90.1300.10	InterPro:AS_sf	InterPro:Amidase_dom	InterPro:IPR036928
KEGG:00970+6.3.5.7	PANTHER:PTHR42678	PANTHER:PTHR42678:SF1	PFAM:PF01425	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF75304	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr1A:+:575590443..575593040

Molecular Weight (calculated)

52026.7 Da

IEP (calculated)

6.194

GRAVY (calculated)

0.135

Length

494 amino acids

Sequence
(BLAST)

001: MPPPLRHLLP LLLAAAAAST AVAFVLEEAT VESIHRAFAG GELTSRGLVE LYLRRIASLD PALHAVVEID ADGALAAADR ADAARLDLDG AALPPLHGIP
101: VLIKDNIAAA GDGSGRLNAT AGSLALVGSR PARDAGVVER LRRAGAVVLG TASLSEWCNF RGPRIPAGWS PRAGQGINPY VPSATPCASS SGSAIAAAAN
201: MVAVTIGTET DGSIMCPSSF NSVVGIKPTV GLTSRAGVII ISPRMDTIGP ICRTVSDAVH VLEAMVGYDA RDAEATRMAS RYIPKGGYGQ FLNIDDLRGK
301: RVGILRKDFF RFAPGSIQEK VFRDHFDTMR KMGAILVDNL EIPSMKIIND AVQSGERALM LAEFKLSLNS YLSELATSPV RSLSDIIDFN NKNPVEERMA
401: EFGQSYLLQS EETNGIGPAE ERAIAKLNKL CEEGLEKIMR ANQLDVIVAP GASAHSLLAI GGYPAITVPA GYASNGVPFA ICFGGVERIR ADAY

Best Arabidopsis Sequence Match ( AT4G34880.1 )
(BLAST)

001: MVALRFFFFS SLLILLILSQ ALIMSVGSAS QIRLSSTFSI QEATIEDIRV AFNEKRLTSK QLVELYLEAI SKLNPILHAV IETNPDALIQ AEIADRERDL
101: KNTTKLPILH GVPVLLKDSI STKDKLNTTA GSFALLGSVV ARDAGVVKRL RESGAVILGK ASLSEWAHFR SFSIPDGWSA PSQNSVVGIK PSVGLTSRAG
201: VVPISLRQDS IGPICRTVSD AVHLLDAIVG YDPLDEATKT ASEFIPEGGY KQFLTTSGLK GKRLGIVMKH SSLLDHHIKT LRREGAIVIN NLTIPNIEVI
301: VGGTDSGEEI ALLAEFKMSL NAYLKELVKS PVRSLADVIA YNEEFAEQEK VKEWGQEVFL TAEATSGMGE KEKTALQKMK ELSRNGIEKL IEENKLDAIV
401: TLGSDLSSVL AIGGYPGINV PAGYDSGGVP YGISFGGLRF SEPKLIEIAF AFEQATLIRK PPKFIA

Arabidopsis Description

Amidase family protein [Source:TAIR;Acc:AT4G34880]
SUBAcon: [vacuole,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.