Subcellular Localization
min:
: max
Winner_takes_all: nucleus, extracellular
Predictor Summary:
Predictor Summary:
- cytosol 1
- plastid 2
- extracellular 6
- plasma membrane 3
- endoplasmic reticulum 3
- vacuole 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
28394025
|
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400048145 | Potato | extracellular | 91.5 | 91.68 |
| PGSC0003DMT400005106 | Potato | extracellular | 73.32 | 87.5 |
| CDY28936 | Canola | plastid | 51.19 | 65.74 |
| Bra022128.1-P | Field mustard | endoplasmic reticulum, vacuole | 58.3 | 59.36 |
| CDY51679 | Canola | endoplasmic reticulum, vacuole | 54.55 | 58.85 |
| Bra011569.1-P | Field mustard | cytosol | 41.7 | 57.97 |
| KRH42701 | Soybean | cytosol | 56.13 | 57.96 |
| KRH42703 | Soybean | cytosol, extracellular | 10.28 | 57.78 |
| KRH58810 | Soybean | nucleus | 58.5 | 57.14 |
| Solyc01g111220.2.1 | Tomato | extracellular | 57.71 | 57.03 |
| Zm00001d004287_P001 | Maize | cytosol | 35.18 | 56.69 |
| CDX69095 | Canola | cytosol | 43.68 | 56.52 |
| TraesCSU01G233300.1 | Wheat | extracellular, golgi | 35.77 | 55.35 |
| AT4G34880.2 | Thale cress | vacuole | 55.73 | 55.08 |
| TraesCS2B01G037200.1 | Wheat | plastid | 33.79 | 54.98 |
| EES11861 | Sorghum | extracellular, golgi, plasma membrane | 55.73 | 54.97 |
| TraesCS2B01G037800.1 | Wheat | extracellular | 31.82 | 54.76 |
| TraesCS2B01G035200.1 | Wheat | cytosol | 52.77 | 54.49 |
| TraesCS2B01G037400.1 | Wheat | nucleus | 53.56 | 53.88 |
| HORVU5Hr1G087780.4 | Barley | extracellular, golgi | 53.95 | 53.85 |
| TraesCS2A01G025200.1 | Wheat | extracellular | 54.35 | 53.82 |
| TraesCSU01G008400.1 | Wheat | extracellular, golgi | 53.95 | 53.74 |
| TraesCS2D01G026900.1 | Wheat | extracellular, golgi | 53.16 | 53.69 |
| TraesCS2B01G035900.1 | Wheat | extracellular, golgi | 52.77 | 53.08 |
| TraesCS3D01G364700.2 | Wheat | extracellular, vacuole | 52.96 | 53.07 |
| TraesCS2A01G064000.1 | Wheat | extracellular, vacuole | 53.16 | 53.06 |
| KXG36216 | Sorghum | cytosol | 51.78 | 53.04 |
| TraesCS2D01G026300.1 | Wheat | cytosol | 52.37 | 52.58 |
| EES10484 | Sorghum | golgi, vacuole | 51.19 | 52.43 |
| EER99375 | Sorghum | extracellular | 52.77 | 52.35 |
| TraesCS2B01G037500.1 | Wheat | cytosol, plastid | 37.75 | 52.33 |
| TraesCS2B01G036000.1 | Wheat | cytosol | 29.05 | 52.31 |
| TraesCS2B01G037100.1 | Wheat | golgi | 51.98 | 51.77 |
| EER97209 | Sorghum | extracellular | 52.17 | 51.76 |
| TraesCS2D01G027000.1 | Wheat | golgi, plasma membrane, vacuole | 51.98 | 51.67 |
| TraesCS1D01G425500.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 52.57 | 51.45 |
| TraesCS2A01G025000.1 | Wheat | golgi, plasma membrane, vacuole | 51.58 | 51.28 |
| TraesCS1B01G448000.1 | Wheat | extracellular, vacuole | 52.37 | 51.26 |
| TraesCS2D01G062200.1 | Wheat | cytosol | 31.42 | 50.96 |
| TraesCS2D01G027200.1 | Wheat | cytosol | 53.16 | 50.85 |
| TraesCS2B01G035800.1 | Wheat | vacuole | 48.22 | 50.1 |
| KRH42704 | Soybean | cytosol | 20.75 | 50.0 |
| TraesCS1A01G417900.1 | Wheat | endoplasmic reticulum, golgi | 48.62 | 49.8 |
| KXG38675 | Sorghum | endoplasmic reticulum, vacuole | 53.16 | 49.54 |
| CDX75471 | Canola | cytosol | 19.17 | 48.99 |
| TraesCSU01G211000.1 | Wheat | cytosol | 26.09 | 48.89 |
| Zm00001d004288_P001 | Maize | extracellular | 18.58 | 48.7 |
| HORVU2Hr1G003810.1 | Barley | extracellular, mitochondrion | 24.7 | 48.64 |
| HORVU2Hr1G004020.1 | Barley | cytosol, mitochondrion | 5.73 | 48.33 |
| HORVU1Hr1G091420.1 | Barley | cytosol, plastid | 38.93 | 48.05 |
| TraesCS2B01G036100.1 | Wheat | cytosol | 19.17 | 48.02 |
| CDX75470 | Canola | plastid | 28.66 | 47.7 |
| HORVU2Hr1G003980.8 | Barley | cytosol | 35.97 | 47.27 |
| HORVU2Hr1G004030.1 | Barley | cytosol | 11.26 | 39.04 |
| EES11858 | Sorghum | extracellular | 5.93 | 37.5 |
| GSMUA_Achr2P11220_001 | Banana | endoplasmic reticulum | 52.37 | 37.32 |
| HORVU2Hr1G003990.5 | Barley | cytosol | 38.14 | 36.76 |
| HORVU1Hr1G091390.1 | Barley | cytosol, extracellular | 10.67 | 33.13 |
| Os11t0123033-01 | Rice | plastid | 12.85 | 31.71 |
Protein Annotations
| EnsemblPlants:Solyc11g071550.1.1 | EnsemblPlantsGene:Solyc11g071550.1 | Gene3D:3.90.1300.10 | InterPro:AS_sf | InterPro:Amidase_dom | InterPro:IPR036928 |
| KEGG:00970+6.3.5.7 | PANTHER:PTHR42678 | PANTHER:PTHR42678:SF9 | PFAM:PF01425 | SEG:seg | SignalP:SignalP-noTM |
| SUPFAM:SSF75304 | UniParc:UPI00027696C9 | UniProt:K4DAL2 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr11:+:54980272..54983517
Molecular Weight (calculated)
54614.9 Da
IEP (calculated)
9.490
GRAVY (calculated)
-0.054
Length
506 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVLAILFIS LILLSNFNNK TEAKAFLFKE TTIDHIHIAL KQNKLTSRQL VEFYLSEIQR SNPILKGIIE VNPDALFLAD KADQERKSNS SKSLSRLHGI
101: PVLVKDNIAT KDKLNTTAGS LALIGSIVPQ DAGVVKKLRN VGAIILGKAT MTEWAAFRST NLPNGWNGRL GQALDPYVAS ADPSGSSTGS ATSVAANMAA
201: VALGTETAGS ILFPSSANSV VGIKPTVGLT SRAGVIPISH RQDTVGPICR TVTDAVEVLD VIVGFDRDDF PATKKASTYI PHGGYRQFLK ADGLRDKRLG
301: ISNYFFGSND IKTYQQHFNT LRKKGAVLVD NLVIPYTDLV NNAIVVAQFT ALSAEFKMDL NAYLKHLVHT QVRSLADVIA FNKISPPEKL KEYGQDIMLE
401: AEKTNGIGKL EREALSNITI ACKYGFEKMM KENKLDALMS PGADIADLLA IGGYPGINVP AGYDKTGTPF GISFGGLKGS EPTLIEIAYG FEQATHIRKP
501: PPSHPQ
101: PVLVKDNIAT KDKLNTTAGS LALIGSIVPQ DAGVVKKLRN VGAIILGKAT MTEWAAFRST NLPNGWNGRL GQALDPYVAS ADPSGSSTGS ATSVAANMAA
201: VALGTETAGS ILFPSSANSV VGIKPTVGLT SRAGVIPISH RQDTVGPICR TVTDAVEVLD VIVGFDRDDF PATKKASTYI PHGGYRQFLK ADGLRDKRLG
301: ISNYFFGSND IKTYQQHFNT LRKKGAVLVD NLVIPYTDLV NNAIVVAQFT ALSAEFKMDL NAYLKHLVHT QVRSLADVIA FNKISPPEKL KEYGQDIMLE
401: AEKTNGIGKL EREALSNITI ACKYGFEKMM KENKLDALMS PGADIADLLA IGGYPGINVP AGYDKTGTPF GISFGGLKGS EPTLIEIAYG FEQATHIRKP
501: PPSHPQ
001: MVALRFFFFS SLLILLILSQ ALIMSVGSAS QIRLSSTFSI QEATIEDIRV AFNEKRLTSK QLVELYLEAI SKLNPILHAV IETNPDALIQ AEIADRERDL
101: KNTTKLPILH GVPVLLKDSI STKDKLNTTA GSFALLGSVV ARDAGVVKRL RESGAVILGK ASLSEWAHFR SFSIPDGWSA RGLQGKNPYV LSANPSGSSS
201: GSAISVTANL VAVSLGTETD GSILSPASQN SVVGIKPSVG LTSRAGVVPI SLRQDSIGPI CRTVSDAVHL LDAIVGYDPL DEATKTASEF IPEGGYKQFL
301: TTSGLKGKRL GIVMKHSSLL DHHIKTLRRE GAIVINNLTI PNIEVIVGGT DSGEEIALLA EFKMSLNAYL KELVKSPVRS LADVIAYNEE FAEQEKVKEW
401: GQEVFLTAEA TSGMGEKEKT ALQKMKELSR NGIEKLIEEN KLDAIVTLGS DLSSVLAIGG YPGINVPAGY DSGGVPYGIS FGGLRFSEPK LIEIAFAFEQ
501: ATLIRKPPKF IA
101: KNTTKLPILH GVPVLLKDSI STKDKLNTTA GSFALLGSVV ARDAGVVKRL RESGAVILGK ASLSEWAHFR SFSIPDGWSA RGLQGKNPYV LSANPSGSSS
201: GSAISVTANL VAVSLGTETD GSILSPASQN SVVGIKPSVG LTSRAGVVPI SLRQDSIGPI CRTVSDAVHL LDAIVGYDPL DEATKTASEF IPEGGYKQFL
301: TTSGLKGKRL GIVMKHSSLL DHHIKTLRRE GAIVINNLTI PNIEVIVGGT DSGEEIALLA EFKMSLNAYL KELVKSPVRS LADVIAYNEE FAEQEKVKEW
401: GQEVFLTAEA TSGMGEKEKT ALQKMKELSR NGIEKLIEEN KLDAIVTLGS DLSSVLAIGG YPGINVPAGY DSGGVPYGIS FGGLRFSEPK LIEIAFAFEQ
501: ATLIRKPPKF IA
Arabidopsis Description
Amidase family protein [Source:TAIR;Acc:AT4G34880]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.