Factsheet for TraesCSU01G008400.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

plasma membrane 4
extracellular 5
endoplasmic reticulum 4
vacuole 4
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	nucleus, secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0183300-01	Rice	cytosol	48.23	77.53
TraesCSU01G233300.1	Wheat	extracellular, golgi	42.72	66.36
TraesCSU01G211000.1	Wheat	cytosol	33.66	63.33
Os06t0271300-00	Rice	cytosol, plastid	66.93	63.2
CDY28936	Canola	plastid	48.03	61.93
PGSC0003DMT400004114	Potato	plastid	17.52	60.54
Bra011569.1-P	Field mustard	cytosol	42.32	59.07
VIT_03s0038g02030.t01	Wine grape	mitochondrion	53.74	58.58
VIT_03s0038g02040.t01	Wine grape	extracellular	59.25	58.56
CDY51679	Canola	endoplasmic reticulum, vacuole	53.15	57.57
Bra022128.1-P	Field mustard	endoplasmic reticulum, vacuole	55.91	57.14
VIT_03s0038g02010.t01	Wine grape	extracellular, vacuole	52.95	56.75
Solyc01g111220.2.1	Tomato	extracellular	56.3	55.86
VIT_03s0038g01970.t01	Wine grape	cytosol	22.64	55.56
CDX69095	Canola	cytosol	42.52	55.24
AT4G34880.2	Thale cress	vacuole	55.51	55.08
KRH42701	Soybean	cytosol	52.56	54.49
PGSC0003DMT400005106	Potato	extracellular	45.08	54.01
Solyc11g071550.1.1	Tomato	extracellular, nucleus	53.74	53.95
PGSC0003DMT400048145	Potato	extracellular	53.35	53.66
PGSC0003DMT400004112	Potato	extracellular	56.69	52.94
KRH58810	Soybean	nucleus	52.76	51.74
KRH42704	Soybean	cytosol	20.28	49.05
CDX75470	Canola	plastid	29.13	48.68
CDX75471	Canola	cytosol	18.5	47.47
KRH42703	Soybean	cytosol, extracellular	8.27	46.67
VIT_03s0038g02020.t01	Wine grape	mitochondrion	23.23	45.91
GSMUA_Achr2P11220_001	Banana	endoplasmic reticulum	59.84	42.82
VIT_03s0038g01990.t01	Wine grape	nucleus, peroxisome, plastid	45.28	38.53
VIT_03s0038g02000.t01	Wine grape	plasma membrane	56.69	28.07

Protein Annotations

EnsemblPlants:TraesCSU01G008400.1	EnsemblPlantsGene:TraesCSU01G008400	Gene3D:3.90.1300.10	InterPro:AS_sf	InterPro:Amidase_dom	InterPro:IPR036928
KEGG:00970+6.3.5.7	PANTHER:PTHR42678	PFAM:PF01425	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF75304
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chrUn:-:12277623..12281601

Molecular Weight (calculated)

54154.8 Da

IEP (calculated)

9.639

GRAVY (calculated)

0.066

Length

508 amino acids

Sequence
(BLAST)

001: MSRLLLAAAV ATLVLAVGAF EIEEATLASI QLGFKNGSLT SVELVRLYLD RIRRLNPLLR AVIEVNPDAL RHAARADAER RSASPVKYLA GGGLLHGVPI
101: LLKDNIATHD ALNTTAGSLA LLGSLTRRDA GVVRRLRLAG AVVLGKANLD EWANFRSLHG SDGWSARGGQ ARNPYVLSAD PCGSSGGSAI ATAANMVAVT
201: LGTERDGSIL CPASLNSVVG IKPTVGLTSR AGVIPTTPRQ DTIGPICRTV ADAVHVLDAI VGYDARDAAA TRRTSKYIPR GGYMQFLNMD GLKGKRIGVP
301: NGFFNFPDGT VQQTVYGQHL NTMRKQGAIL IENLDIENLD IIMDNLNNGQ QIALPAEFKL SLNSYLLDLS YSPVRSLAEI IAFNNAHPIE ERLKEIGQII
401: FLAAENTTGI GAPERAAIRQ LKKLSANGLE KLMKEHKLDA IVMPNADASS ALAIGGMPGI SVPAGYGKMG VPFGLCFGGL RGYDPRLIEM AYAFEQNTKV
501: RKAPMFMP

Best Arabidopsis Sequence Match ( AT4G34880.2 )
(BLAST)

001: MVALRFFFFS SLLILLILSQ ALIMSVGSAS QIRLSSTFSI QEATIEDIRV AFNEKRLTSK QLVELYLEAI SKLNPILHAV IETNPDALIQ AEIADRERDL
101: KNTTKLPILH GVPVLLKDSI STKDKLNTTA GSFALLGSVV ARDAGVVKRL RESGAVILGK ASLSEWAHFR SFSIPDGWSA RGLQGKNPYV LSANPSGSSS
201: GSAISVTANL VAVSLGTETD GSILSPASQN SVVGIKPSVG LTSRAGVVPI SLRQDSIGPI CRTVSDAVHL LDAIVGYDPL DEATKTASEF IPEGGYKQFL
301: TTSGLKGKRL GIVMKHSSLL DHHIKTLRRE GAIVINNLTI PNIEVIVGGT DSGEEIALLA EFKMSLNAYL KELVKSPVRS LADVIAYNEE FAEQEKVKEW
401: GQEVFLTAEA TSGMGEKEKT ALQKMKELSR NGIEKLIEEN KLDAIVTLGS DLSSVLAIGG YPGINVPAGY DSGGVPYGIS FGGLRFSEPK LIEIAFAFEQ
501: ATLIRKPPKF IA

Arabidopsis Description

Amidase family protein [Source:TAIR;Acc:AT4G34880]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.