Factsheet for VIT_03s0038g02020.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	mitochondrion
Plant-mPloc:	plastid
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_03s0038g02010.t01	Wine grape	extracellular, vacuole	72.76	39.45
VIT_03s0038g02030.t01	Wine grape	mitochondrion	68.48	37.77
CDY28936	Canola	plastid	52.53	34.26
CDX75471	Canola	cytosol	25.68	33.33
VIT_03s0038g02040.t01	Wine grape	extracellular	61.09	30.54
CDY51679	Canola	endoplasmic reticulum, vacuole	54.47	29.85
Bra011569.1-P	Field mustard	cytosol	40.86	28.85
Bra022128.1-P	Field mustard	endoplasmic reticulum, vacuole	54.09	27.97
AT4G34880.2	Thale cress	vacuole	55.25	27.73
TraesCS2B01G037500.1	Wheat	cytosol, plastid	38.52	27.12
CDX69095	Canola	cytosol	41.25	27.11
HORVU1Hr1G091420.1	Barley	cytosol, plastid	42.41	26.59
TraesCS2B01G036100.1	Wheat	cytosol	20.23	25.74
VIT_03s0038g01970.t01	Wine grape	cytosol	20.23	25.12
TraesCS2A01G025200.1	Wheat	extracellular	47.47	23.87
TraesCS2B01G036000.1	Wheat	cytosol	25.68	23.49
Zm00001d004287_P001	Maize	cytosol	28.4	23.25
TraesCSU01G008400.1	Wheat	extracellular, golgi	45.91	23.23
TraesCS2B01G037100.1	Wheat	golgi	45.14	22.83
TraesCS2D01G027000.1	Wheat	golgi, plasma membrane, vacuole	45.14	22.79
TraesCS1A01G417900.1	Wheat	endoplasmic reticulum, golgi	43.58	22.67
TraesCS2B01G035200.1	Wheat	cytosol	43.19	22.65
TraesCS1B01G448000.1	Wheat	extracellular, vacuole	45.53	22.63
EES11861	Sorghum	extracellular, golgi, plasma membrane	45.14	22.61
HORVU2Hr1G004030.1	Barley	cytosol	12.84	22.6
TraesCS3D01G364700.2	Wheat	extracellular, vacuole	44.36	22.57
TraesCS1D01G425500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	45.14	22.44
TraesCS2A01G025000.1	Wheat	golgi, plasma membrane, vacuole	44.36	22.4
CDX75470	Canola	plastid	26.46	22.37
HORVU5Hr1G087780.4	Barley	extracellular, golgi	43.97	22.29
HORVU2Hr1G003980.8	Barley	cytosol	33.07	22.08
TraesCS2A01G064000.1	Wheat	extracellular, vacuole	43.19	21.89
TraesCS2D01G026300.1	Wheat	cytosol	42.8	21.83
TraesCS2D01G062200.1	Wheat	cytosol	26.46	21.79
TraesCS2D01G027200.1	Wheat	cytosol	44.36	21.55
KXG36216	Sorghum	cytosol	41.25	21.46
EER97209	Sorghum	extracellular	42.41	21.37
TraesCS2B01G037400.1	Wheat	nucleus	41.63	21.27
TraesCS2B01G037200.1	Wheat	plastid	25.68	21.22
KXG38675	Sorghum	endoplasmic reticulum, vacuole	44.75	21.18
VIT_03s0038g01990.t01	Wine grape	nucleus, peroxisome, plastid	49.03	21.11
TraesCS2B01G035900.1	Wheat	extracellular, golgi	41.25	21.07
EER99375	Sorghum	extracellular	41.63	20.98
TraesCS2D01G026900.1	Wheat	extracellular, golgi	40.47	20.76
EES10484	Sorghum	golgi, vacuole	38.13	19.84
TraesCS2B01G037800.1	Wheat	extracellular	22.57	19.73
HORVU2Hr1G003810.1	Barley	extracellular, mitochondrion	19.46	19.46
TraesCSU01G233300.1	Wheat	extracellular, golgi	24.51	19.27
TraesCS2B01G035800.1	Wheat	vacuole	35.02	18.48
TraesCSU01G211000.1	Wheat	cytosol	19.07	18.15
VIT_03s0038g02000.t01	Wine grape	plasma membrane	71.6	17.93
HORVU2Hr1G003990.5	Barley	cytosol	36.58	17.9
GSMUA_Achr2P11220_001	Banana	endoplasmic reticulum	45.91	16.62
Zm00001d004288_P001	Maize	extracellular	12.06	16.06
HORVU2Hr1G004020.1	Barley	cytosol, mitochondrion	2.33	10.0
HORVU1Hr1G091390.1	Barley	cytosol, extracellular	3.11	4.91
EES11858	Sorghum	extracellular	1.17	3.75

Protein Annotations

ArrayExpress:VIT_03s0038g02020	EMBL:FN596508	EnsemblPlants:VIT_03s0038g02020.t01	EnsemblPlantsGene:VIT_03s0038g02020	Gene3D:3.90.1300.10	InterPro:AS_sf
InterPro:Amidase_dom	InterPro:IPR036928	KEGG:00970+6.3.5.7	PANTHER:PTHR42678	PANTHER:PTHR42678:SF10	PFAM:PF01425
ProteinID:CCB60638	ProteinID:CCB60638.1	SEG:seg	SUPFAM:SSF75304	UniParc:UPI000210AA81	UniProt:F6I122
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr3:+:1395923..1400744

Molecular Weight (calculated)

27803.6 Da

IEP (calculated)

9.397

GRAVY (calculated)

0.024

Length

257 amino acids

Sequence
(BLAST)

001: MHSSKPTRLT GTGRLSVVRK LRKVGAIILG KASLSEWAGS RFATPYGWCA RAGQGRNPYV LSETPCGSSS GSAISVAANL AAVSLGTETD GSILYPSHIN
101: SLVWFQSLLG RTLLGQGGAI LVDHLEIANI DVIFGSSREE ATLEAEFKIS LNAYLKELVA SPVRTLADVI AFNNKFSHLE KIKEYGQDSF LRAEATKGIS
201: KKTLLKLARL SRNGFKKLMN EHKLDALVTP GADVLEDSPE LLFQLDMIAK ECHLAFV

Best Arabidopsis Sequence Match ( AT4G34880.1 )
(BLAST)

001: MVALRFFFFS SLLILLILSQ ALIMSVGSAS QIRLSSTFSI QEATIEDIRV AFNEKRLTSK QLVELYLEAI SKLNPILHAV IETNPDALIQ AEIADRERDL
101: KNTTKLPILH GVPVLLKDSI STKDKLNTTA GSFALLGSVV ARDAGVVKRL RESGAVILGK ASLSEWAHFR SFSIPDGWSA PSQNSVVGIK PSVGLTSRAG
201: VVPISLRQDS IGPICRTVSD AVHLLDAIVG YDPLDEATKT ASEFIPEGGY KQFLTTSGLK GKRLGIVMKH SSLLDHHIKT LRREGAIVIN NLTIPNIEVI
301: VGGTDSGEEI ALLAEFKMSL NAYLKELVKS PVRSLADVIA YNEEFAEQEK VKEWGQEVFL TAEATSGMGE KEKTALQKMK ELSRNGIEKL IEENKLDAIV
401: TLGSDLSSVL AIGGYPGINV PAGYDSGGVP YGISFGGLRF SEPKLIEIAF AFEQATLIRK PPKFIA

Arabidopsis Description

Amidase family protein [Source:TAIR;Acc:AT4G34880]
SUBAcon: [vacuole,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.