Factsheet for TraesCS1D01G425500.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole, extracellular, endoplasmic reticulum

Predictor Summary:

plasma membrane 4
extracellular 5
endoplasmic reticulum 5
vacuole 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G448000.1	Wheat	extracellular, vacuole	97.68	97.68
TraesCS1A01G417900.1	Wheat	endoplasmic reticulum, golgi	91.3	95.55
HORVU1Hr1G091420.1	Barley	cytosol, plastid	69.25	87.32
KXG38675	Sorghum	endoplasmic reticulum, vacuole	82.98	79.01
Os10t0155400-00	Rice	mitochondrion	52.42	72.85
CDY28936	Canola	plastid	45.65	59.9
PGSC0003DMT400004114	Potato	plastid	16.83	59.18
TraesCS2D01G027000.1	Wheat	golgi, plasma membrane, vacuole	57.45	58.35
VIT_03s0038g02010.t01	Wine grape	extracellular, vacuole	53.38	58.23
TraesCS3D01G364700.2	Wheat	extracellular, vacuole	55.51	56.83
TraesCS2D01G026900.1	Wheat	extracellular, golgi	54.93	56.69
VIT_03s0038g02040.t01	Wine grape	extracellular	56.29	56.61
VIT_03s0038g02030.t01	Wine grape	mitochondrion	50.87	56.44
TraesCS2D01G026300.1	Wheat	cytosol	54.93	56.35
Bra011569.1-P	Field mustard	cytosol	39.65	56.32
KRH42703	Soybean	cytosol, extracellular	9.67	55.56
VIT_03s0038g01970.t01	Wine grape	cytosol	21.86	54.59
CDY51679	Canola	endoplasmic reticulum, vacuole	49.52	54.58
Bra022128.1-P	Field mustard	endoplasmic reticulum, vacuole	52.22	54.33
KRH42701	Soybean	cytosol	51.26	54.08
CDX69095	Canola	cytosol	40.81	53.96
Solyc01g111220.2.1	Tomato	extracellular	53.38	53.91
TraesCS2D01G027200.1	Wheat	cytosol	55.13	53.88
TraesCS2D01G062200.1	Wheat	cytosol	32.5	53.85
PGSC0003DMT400005106	Potato	extracellular	43.33	52.83
AT4G34880.2	Thale cress	vacuole	52.22	52.73
Solyc11g071550.1.1	Tomato	extracellular, nucleus	51.45	52.57
PGSC0003DMT400048145	Potato	extracellular	50.68	51.88
KRH58810	Soybean	nucleus	51.06	50.97
PGSC0003DMT400004112	Potato	extracellular	53.38	50.74
KRH42704	Soybean	cytosol	19.15	47.14
CDX75470	Canola	plastid	27.66	47.04
CDX75471	Canola	cytosol	17.99	46.97
VIT_03s0038g02020.t01	Wine grape	mitochondrion	22.44	45.14
VIT_03s0038g01990.t01	Wine grape	nucleus, peroxisome, plastid	45.07	39.03
VIT_03s0038g02000.t01	Wine grape	plasma membrane	55.9	28.17

Protein Annotations

EnsemblPlants:TraesCS1D01G425500.1	EnsemblPlantsGene:TraesCS1D01G425500	Gene3D:3.90.1300.10	InterPro:AS_sf	InterPro:Amidase_dom	InterPro:IPR036928
KEGG:00970+6.3.5.7	PANTHER:PTHR42678	PANTHER:PTHR42678:SF1	PFAM:PF01425	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF75304	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr1D:+:479224111..479226549

Molecular Weight (calculated)

54268.6 Da

IEP (calculated)

7.207

GRAVY (calculated)

0.160

Length

517 amino acids

Sequence
(BLAST)

001: MPPPLRHLLP LLLAAAAAST AAAFVLEEAT VESIHRAFAG GELTSRGLVE LYLRRIASLD PALHAVVEID AAGALAAADR ADAARLELDG AALPPLHGIP
101: VLIKDNIAAA GDGSGRLNAT AGSLALVGSR PARDAGVVER LRRAGAVVLG TASLSEWCNF RAPGIPAGWS PRAGQGINPY VPSATPCASS SGSAIAAAAN
201: MVAVTIGTET DGSIMCPSSF NSVVGIKPTV GLTSRAGVII ISPRMDTIGP ICRTVSDAVH VLEAMVGYDP RDAEATRMAS RYIPKGGYGQ FLNIDGLRGK
301: RVGILRKDFF RFAPGSIQEK VFRDHFNTMR KMGAILVDNL EIPSMKVIND AVQSGERALM LAEFKLSLNS YLSELASSPV RSLSDIIDFN NKNPVEERMA
401: EFGQSYLLQS EATNGIGPAE ERAIAKLNKL CEEGLEKIMR ANQLDAIVAP GASAHSLLAI GGYPAITVPA GYASNGVPFA ICFGGLKGSE PMLIEIAYSF
501: EQATKVRKPP ILQHSVI

Best Arabidopsis Sequence Match ( AT4G34880.1 )
(BLAST)

001: MVALRFFFFS SLLILLILSQ ALIMSVGSAS QIRLSSTFSI QEATIEDIRV AFNEKRLTSK QLVELYLEAI SKLNPILHAV IETNPDALIQ AEIADRERDL
101: KNTTKLPILH GVPVLLKDSI STKDKLNTTA GSFALLGSVV ARDAGVVKRL RESGAVILGK ASLSEWAHFR SFSIPDGWSA PSQNSVVGIK PSVGLTSRAG
201: VVPISLRQDS IGPICRTVSD AVHLLDAIVG YDPLDEATKT ASEFIPEGGY KQFLTTSGLK GKRLGIVMKH SSLLDHHIKT LRREGAIVIN NLTIPNIEVI
301: VGGTDSGEEI ALLAEFKMSL NAYLKELVKS PVRSLADVIA YNEEFAEQEK VKEWGQEVFL TAEATSGMGE KEKTALQKMK ELSRNGIEKL IEENKLDAIV
401: TLGSDLSSVL AIGGYPGINV PAGYDSGGVP YGISFGGLRF SEPKLIEIAF AFEQATLIRK PPKFIA

Arabidopsis Description

Amidase family protein [Source:TAIR;Acc:AT4G34880]
SUBAcon: [vacuole,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.