CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole, endoplasmic reticulum

Predictor Summary:

nucleus 1
plastid 2
endoplasmic reticulum 4
plasma membrane 3
extracellular 3
vacuole 4
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G425500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	79.01	82.98
TraesCS1B01G448000.1	Wheat	extracellular, vacuole	78.45	82.4
TraesCS1A01G417900.1	Wheat	endoplasmic reticulum, golgi	73.11	80.36
HORVU1Hr1G091420.1	Barley	cytosol, plastid	59.12	78.29
Os10t0155400-00	Rice	mitochondrion	47.51	69.35
CDY28936	Canola	plastid	42.91	59.14
KXG36216	Sorghum	cytosol	53.04	58.3
PGSC0003DMT400004114	Potato	plastid	15.65	57.82
EES11861	Sorghum	extracellular, golgi, plasma membrane	54.51	57.7
EER99375	Sorghum	extracellular	54.14	57.65
VIT_03s0038g02040.t01	Wine grape	extracellular	54.51	57.59
EER97209	Sorghum	extracellular	53.41	56.86
VIT_03s0038g02010.t01	Wine grape	extracellular, vacuole	49.17	56.33
VIT_03s0038g02030.t01	Wine grape	mitochondrion	48.25	56.22
Bra011569.1-P	Field mustard	cytosol	37.38	55.77
CDY51679	Canola	endoplasmic reticulum, vacuole	47.33	54.8
KRH42703	Soybean	cytosol, extracellular	9.02	54.44
Bra022128.1-P	Field mustard	endoplasmic reticulum, vacuole	49.54	54.12
KRH42701	Soybean	cytosol	48.25	53.47
EES10484	Sorghum	golgi, vacuole	48.62	53.44
Solyc11g071550.1.1	Tomato	extracellular, nucleus	49.54	53.16
PGSC0003DMT400005106	Potato	extracellular	41.44	53.07
CDX69095	Canola	cytosol	38.12	52.94
AT4G34880.2	Thale cress	vacuole	49.72	52.73
Solyc01g111220.2.1	Tomato	extracellular	49.72	52.73
VIT_03s0038g01970.t01	Wine grape	cytosol	19.89	52.17
PGSC0003DMT400048145	Potato	extracellular	48.25	51.88
PGSC0003DMT400004112	Potato	extracellular	50.09	50.0
KRH58810	Soybean	nucleus	47.33	49.61
CDX75471	Canola	cytosol	16.57	45.45
KRH42704	Soybean	cytosol	17.5	45.24
CDX75470	Canola	plastid	25.23	45.07
VIT_03s0038g02020.t01	Wine grape	mitochondrion	21.18	44.75
VIT_03s0038g01990.t01	Wine grape	nucleus, peroxisome, plastid	42.17	38.36
EES11858	Sorghum	extracellular	5.52	37.5
VIT_03s0038g02000.t01	Wine grape	plasma membrane	52.49	27.78

Protein Annotations

EnsemblPlants:KXG38675	EnsemblPlantsGene:SORBI_3001G265500	Gene3D:3.90.1300.10	InterPro:AS_sf	InterPro:Amidase_dom	InterPro:IPR036928
KEGG:00970+6.3.5.7	MetaCyc:PWY-5921	PANTHER:PTHR42678	PANTHER:PTHR42678:SF1	PFAM:PF01425	ProteinID:KXG38675
ProteinID:KXG38675.1	SEG:seg	SUPFAM:SSF75304	UniParc:UPI00081AC7A8	UniProt:A0A1B6QL99	MapMan:35.1

Description

hypothetical protein

Coordinates

chr1:+:50141724..50144869

Molecular Weight (calculated)

57463.2 Da

IEP (calculated)

6.739

GRAVY (calculated)

0.070

Length

543 amino acids

Sequence
(BLAST)

001: MEQHNSASQI LSSIIISPAF SPRTVTMAMT LSLCYLLLLV LAGDGRGEVA AFELEEATID SIHRAFATGG LTSRGLVELY LRRIASLDPT LHAIIEIDPD
101: GALAAADRAD AAARSSSGVL PPLHGVPVLL KDNIAAAGDG GVLNATAGSL AMVGSRPARD AGVVERLRRA GAVLLGTASL SEWCNFRGPG IPAGWSPRGG
201: QGRNPYVPSA TTCSSSSGSA IAAASNMAAV TIGTETDGSI MCPSSYNSVV GIKPTVGLTS RAGVIIISQR MDTIGPITRT VSDAVHVLEA IVGYDPRDAE
301: ATRMGSRYIP EGGYKQFLTI HGLRGKRLGI LRKDFFRFPS GSVQEQVFSD HFRTMSKMGA ILVDNLEIPS MNVINDAMQS GERALMLAEF KLSLNSYLSE
401: LATSPVRSLS DIIEFNKKHP IEERMAEFGQ DYLLQSEATN GIGPTEEHAI LNLNKLCKRG LEKIMQDNQL DAIVAPGASA HSLLAIGGYP AITVPAGYAA
501: NGVPFAICFG GLKGSEPKLI EISYSFEQAT RVRKPPSMQH SVI

Best Arabidopsis Sequence Match ( AT4G34880.2 )
(BLAST)

001: MVALRFFFFS SLLILLILSQ ALIMSVGSAS QIRLSSTFSI QEATIEDIRV AFNEKRLTSK QLVELYLEAI SKLNPILHAV IETNPDALIQ AEIADRERDL
101: KNTTKLPILH GVPVLLKDSI STKDKLNTTA GSFALLGSVV ARDAGVVKRL RESGAVILGK ASLSEWAHFR SFSIPDGWSA RGLQGKNPYV LSANPSGSSS
201: GSAISVTANL VAVSLGTETD GSILSPASQN SVVGIKPSVG LTSRAGVVPI SLRQDSIGPI CRTVSDAVHL LDAIVGYDPL DEATKTASEF IPEGGYKQFL
301: TTSGLKGKRL GIVMKHSSLL DHHIKTLRRE GAIVINNLTI PNIEVIVGGT DSGEEIALLA EFKMSLNAYL KELVKSPVRS LADVIAYNEE FAEQEKVKEW
401: GQEVFLTAEA TSGMGEKEKT ALQKMKELSR NGIEKLIEEN KLDAIVTLGS DLSSVLAIGG YPGINVPAGY DSGGVPYGIS FGGLRFSEPK LIEIAFAFEQ
501: ATLIRKPPKF IA

Arabidopsis Description

Amidase family protein [Source:TAIR;Acc:AT4G34880]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.