Factsheet for PGSC0003DMT400005106

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 3
extracellular 6
mitochondrion 1
plasma membrane 3
endoplasmic reticulum 3
vacuole 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	extracellular
Plant-mPloc:	mitochondrion, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400048145	Potato	extracellular	91.27	76.63
Solyc11g071550.1.1	Tomato	extracellular, nucleus	87.5	73.32
KRH42703	Soybean	cytosol, extracellular	11.79	55.56
PGSC0003DMT400004114	Potato	plastid	18.16	52.38
CDY28936	Canola	plastid	47.64	51.27
TraesCSU01G233300.1	Wheat	extracellular, golgi	38.44	49.85
Bra022128.1-P	Field mustard	endoplasmic reticulum, vacuole	57.55	49.09
CDY51679	Canola	endoplasmic reticulum, vacuole	53.77	48.61
KRH42701	Soybean	cytosol	56.13	48.57
Zm00001d004287_P001	Maize	cytosol	35.85	48.41
HORVU2Hr1G004020.1	Barley	cytosol, mitochondrion	6.84	48.33
TraesCS2B01G037800.1	Wheat	extracellular	33.49	48.3
KRH58810	Soybean	nucleus	58.49	47.88
KRH42704	Soybean	cytosol	23.58	47.62
TraesCS2B01G037200.1	Wheat	plastid	34.91	47.59
Bra011569.1-P	Field mustard	cytosol	40.09	46.7
EES11861	Sorghum	extracellular, golgi, plasma membrane	56.13	46.39
TraesCS2B01G035200.1	Wheat	cytosol	53.54	46.33
PGSC0003DMT400004112	Potato	extracellular	59.2	46.14
TraesCS2D01G026900.1	Wheat	extracellular, golgi	54.48	46.11
TraesCS2B01G037400.1	Wheat	nucleus	54.48	45.92
TraesCS2B01G035900.1	Wheat	extracellular, golgi	54.48	45.92
AT4G34880.2	Thale cress	vacuole	55.42	45.9
EER97209	Sorghum	extracellular	54.95	45.69
HORVU5Hr1G087780.4	Barley	extracellular, golgi	54.48	45.56
KXG36216	Sorghum	cytosol	52.83	45.34
TraesCSU01G008400.1	Wheat	extracellular, golgi	54.01	45.08
TraesCS3D01G364700.2	Wheat	extracellular, vacuole	53.54	44.95
CDX69095	Canola	cytosol	41.27	44.76
EER99375	Sorghum	extracellular	53.77	44.71
TraesCS2D01G026300.1	Wheat	cytosol	52.83	44.44
TraesCS2A01G025200.1	Wheat	extracellular	53.54	44.42
TraesCS2A01G064000.1	Wheat	extracellular, vacuole	53.07	44.38
TraesCS2B01G036000.1	Wheat	cytosol	29.01	43.77
TraesCS2D01G027200.1	Wheat	cytosol	54.48	43.67
TraesCS2D01G062200.1	Wheat	cytosol	32.08	43.59
EES10484	Sorghum	golgi, vacuole	50.71	43.52
TraesCS1B01G448000.1	Wheat	extracellular, vacuole	53.07	43.52
TraesCS1D01G425500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	52.83	43.33
TraesCS2D01G027000.1	Wheat	golgi, plasma membrane, vacuole	51.89	43.22
TraesCS2B01G035800.1	Wheat	vacuole	49.53	43.12
TraesCS2B01G037100.1	Wheat	golgi	51.65	43.11
TraesCS2A01G025000.1	Wheat	golgi, plasma membrane, vacuole	51.65	43.03
CDX75470	Canola	plastid	30.66	42.76
TraesCS2B01G037500.1	Wheat	cytosol, plastid	36.32	42.19
HORVU2Hr1G003810.1	Barley	extracellular, mitochondrion	25.47	42.02
HORVU2Hr1G003980.8	Barley	cytosol	37.74	41.56
KXG38675	Sorghum	endoplasmic reticulum, vacuole	53.07	41.44
TraesCS1A01G417900.1	Wheat	endoplasmic reticulum, golgi	48.11	41.3
TraesCSU01G211000.1	Wheat	cytosol	25.0	39.26
HORVU1Hr1G091420.1	Barley	cytosol, plastid	37.5	38.78
EES11858	Sorghum	extracellular	7.31	38.75
Zm00001d004288_P001	Maize	extracellular	16.27	35.75
TraesCS2B01G036100.1	Wheat	cytosol	16.98	35.64
CDX75471	Canola	cytosol	15.09	32.32
HORVU1Hr1G091390.1	Barley	cytosol, extracellular	12.03	31.29
HORVU2Hr1G003990.5	Barley	cytosol	38.68	31.24
GSMUA_Achr2P11220_001	Banana	endoplasmic reticulum	51.18	30.56
HORVU2Hr1G004030.1	Barley	cytosol	8.96	26.03
Os11t0123033-01	Rice	plastid	9.91	20.49

Protein Annotations

EnsemblPlants:PGSC0003DMT400005106	EnsemblPlantsGene:PGSC0003DMG400002019	Gene3D:3.90.1300.10	InterPro:AS_sf	InterPro:Amidase_dom	InterPro:IPR036928
KEGG:00970+6.3.5.7	PANTHER:PTHR42678	PANTHER:PTHR42678:SF9	PFAM:PF01425	PGSC:PGSC0003DMG400002019	SEG:seg
SignalP:SignalP-noTM	SUPFAM:SSF75304	UniParc:UPI00029595E6	UniProt:M0ZPH1	MapMan:35.1	:

Description

Amidase family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400002019]

Coordinates

chr9:-:6947668..6951299

Molecular Weight (calculated)

45821.1 Da

IEP (calculated)

9.288

GRAVY (calculated)

-0.093

Length

424 amino acids

Sequence
(BLAST)

001: MSVLAIVFIS LILSNFSNKT EAKTFSFKET TIDDIHIAFK QNKLTSRQLV EFYLSEIQRS NPILKGIIEV NPDALFLADK ADQERELNAS KSLFRLHGIP
101: ILVKDNIATK DKLNTTAGSL ALVGSIVPQD AGVVKKLRND PYVASADPSG SSTGSATSIA ANMAAVALGT ETAGSILSPS SANSVVGIKP TVGLTSRAGV
201: IPISHRQDTV GPICRTVTDA VEVLDVIVGF DRDDFAATKK ASTYIPHGGY RQFLKADGLR DKRLGISKDL FGSNDIKTYQ QHFNTLRQKG AVLVDNLEKL
301: KKYGQDIMLE AEKTNGIGKL EREAFRNITK ACKYGFEKMM KENKLDALMS PGADIAGLLA IGGYPGINVP AGYDKTGAPF GISFGGLKGS EPTLIEIAYG
401: FEQATHIRSP FLHILNRNYI FDSI

Best Arabidopsis Sequence Match ( AT4G34880.2 )
(BLAST)

001: MVALRFFFFS SLLILLILSQ ALIMSVGSAS QIRLSSTFSI QEATIEDIRV AFNEKRLTSK QLVELYLEAI SKLNPILHAV IETNPDALIQ AEIADRERDL
101: KNTTKLPILH GVPVLLKDSI STKDKLNTTA GSFALLGSVV ARDAGVVKRL RESGAVILGK ASLSEWAHFR SFSIPDGWSA RGLQGKNPYV LSANPSGSSS
201: GSAISVTANL VAVSLGTETD GSILSPASQN SVVGIKPSVG LTSRAGVVPI SLRQDSIGPI CRTVSDAVHL LDAIVGYDPL DEATKTASEF IPEGGYKQFL
301: TTSGLKGKRL GIVMKHSSLL DHHIKTLRRE GAIVINNLTI PNIEVIVGGT DSGEEIALLA EFKMSLNAYL KELVKSPVRS LADVIAYNEE FAEQEKVKEW
401: GQEVFLTAEA TSGMGEKEKT ALQKMKELSR NGIEKLIEEN KLDAIVTLGS DLSSVLAIGG YPGINVPAGY DSGGVPYGIS FGGLRFSEPK LIEIAFAFEQ
501: ATLIRKPPKF IA

Arabidopsis Description

Amidase family protein [Source:TAIR;Acc:AT4G34880]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.