Factsheet for TraesCS2A01G025000.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole, plasma membrane

Predictor Summary:

plasma membrane 5
extracellular 4
endoplasmic reticulum 4
vacuole 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G027000.1	Wheat	golgi, plasma membrane, vacuole	97.05	97.05
TraesCS2B01G037100.1	Wheat	golgi	90.18	90.35
TraesCS2B01G035800.1	Wheat	vacuole	82.12	85.83
TraesCS2A01G025200.1	Wheat	extracellular	80.16	79.84
Os04t0183300-01	Rice	cytosol	46.76	75.32
TraesCS2A01G064000.1	Wheat	extracellular, vacuole	65.82	66.08
Os06t0271300-00	Rice	cytosol, plastid	65.42	61.9
PGSC0003DMT400004114	Potato	plastid	17.68	61.22
CDY28936	Canola	plastid	46.95	60.66
Bra011569.1-P	Field mustard	cytosol	41.85	58.52
TraesCS1A01G417900.1	Wheat	endoplasmic reticulum, golgi	55.4	57.09
CDY51679	Canola	endoplasmic reticulum, vacuole	52.06	56.5
VIT_03s0038g02030.t01	Wine grape	mitochondrion	51.67	56.44
VIT_03s0038g02040.t01	Wine grape	extracellular	56.78	56.23
Solyc01g111220.2.1	Tomato	extracellular	56.39	56.05
Bra022128.1-P	Field mustard	endoplasmic reticulum, vacuole	54.62	55.94
KRH42701	Soybean	cytosol	52.65	54.69
VIT_03s0038g02010.t01	Wine grape	extracellular, vacuole	50.88	54.64
AT4G34880.2	Thale cress	vacuole	54.22	53.91
CDX69095	Canola	cytosol	41.06	53.45
PGSC0003DMT400004112	Potato	extracellular	56.58	52.94
VIT_03s0038g01970.t01	Wine grape	cytosol	21.41	52.66
KRH58810	Soybean	nucleus	53.05	52.12
PGSC0003DMT400005106	Potato	extracellular	43.03	51.65
Solyc11g071550.1.1	Tomato	extracellular, nucleus	51.28	51.58
PGSC0003DMT400048145	Potato	extracellular	50.88	51.29
KRH42704	Soybean	cytosol	20.24	49.05
CDX75470	Canola	plastid	28.88	48.36
CDX75471	Canola	cytosol	17.29	44.44
VIT_03s0038g02020.t01	Wine grape	mitochondrion	22.4	44.36
GSMUA_Achr2P11220_001	Banana	endoplasmic reticulum	61.3	43.94
KRH42703	Soybean	cytosol, extracellular	7.47	42.22
VIT_03s0038g01990.t01	Wine grape	nucleus, peroxisome, plastid	43.61	37.19
VIT_03s0038g02000.t01	Wine grape	plasma membrane	54.42	27.0

Protein Annotations

EnsemblPlants:TraesCS2A01G025000.1	EnsemblPlantsGene:TraesCS2A01G025000	Gene3D:3.90.1300.10	InterPro:AS_sf	InterPro:Amidase_dom	InterPro:IPR036928
KEGG:00970+6.3.5.7	PANTHER:PTHR42678	PFAM:PF01425	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF75304
TMHMM:TMhelix	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr2A:-:11974737..11977411

Molecular Weight (calculated)

54391.1 Da

IEP (calculated)

9.578

GRAVY (calculated)

0.106

Length

509 amino acids

Sequence
(BLAST)

001: MPRPLVAVLV AALVLVLELP GAHGFQIEEA TVASIQLGFN NGSLTSMELV RFYLDRISRL NPLLHAVIEV NPDALRQAAR ADAERCSGRR RRAIGALHGV
101: PVLLKDNIAT RDALNTTAGS FAMLGSVVRR DAGVVRRLRR AGAVVLGKAN MDEWANFRSF SGGGWSARGG KGRNPYVLSA TPCGSSTGSA IAASASMAAV
201: TLGTETDGSI LCPASLNSVV GIKPTVGLTS RAGVIPITPR QDTIGPICRT VADAVHVLDA IVGYDALDAI ATMQASKYIP RGGYMQFLKK DGLRGKRIGV
301: PNGFFNFPNG TAQQMVYERH LSTMRKQGAI VIENLDIENL SVLLDFQNNG QLIALPAEFK LSLNSYLSNL LYSPVRSLAE IIAFNNAHPV EENMKENGQT
401: IFLVAENTTG IGALEREAIS QLNKLSANGL KKLMREHELD AIATPNNAAS SVLAIDGLPA ITVPAGYGKL GVPFGLCFSG LRGYEPRLIE MAYAFEHVTM
501: ARKMPTFLP

Best Arabidopsis Sequence Match ( AT4G34880.2 )
(BLAST)

001: MVALRFFFFS SLLILLILSQ ALIMSVGSAS QIRLSSTFSI QEATIEDIRV AFNEKRLTSK QLVELYLEAI SKLNPILHAV IETNPDALIQ AEIADRERDL
101: KNTTKLPILH GVPVLLKDSI STKDKLNTTA GSFALLGSVV ARDAGVVKRL RESGAVILGK ASLSEWAHFR SFSIPDGWSA RGLQGKNPYV LSANPSGSSS
201: GSAISVTANL VAVSLGTETD GSILSPASQN SVVGIKPSVG LTSRAGVVPI SLRQDSIGPI CRTVSDAVHL LDAIVGYDPL DEATKTASEF IPEGGYKQFL
301: TTSGLKGKRL GIVMKHSSLL DHHIKTLRRE GAIVINNLTI PNIEVIVGGT DSGEEIALLA EFKMSLNAYL KELVKSPVRS LADVIAYNEE FAEQEKVKEW
401: GQEVFLTAEA TSGMGEKEKT ALQKMKELSR NGIEKLIEEN KLDAIVTLGS DLSSVLAIGG YPGINVPAGY DSGGVPYGIS FGGLRFSEPK LIEIAFAFEQ
501: ATLIRKPPKF IA

Arabidopsis Description

Amidase family protein [Source:TAIR;Acc:AT4G34880]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.