Subcellular Localization
min:
: max
Winner_takes_all: vacuole, extracellular
Predictor Summary:
Predictor Summary:
- plasma membrane 5
- extracellular 6
- endoplasmic reticulum 5
- vacuole 6
- golgi 5
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_03s0038g02030.t01 | Wine grape | mitochondrion | 78.06 | 79.4 |
| VIT_03s0038g02020.t01 | Wine grape | mitochondrion | 39.45 | 72.76 |
| CDY28936 | Canola | plastid | 58.86 | 70.81 |
| VIT_03s0038g02040.t01 | Wine grape | extracellular | 76.37 | 70.43 |
| CDY51679 | Canola | endoplasmic reticulum, vacuole | 65.4 | 66.1 |
| CDX69095 | Canola | cytosol | 52.74 | 63.94 |
| Bra022128.1-P | Field mustard | endoplasmic reticulum, vacuole | 65.19 | 62.17 |
| Bra011569.1-P | Field mustard | cytosol | 46.41 | 60.44 |
| VIT_03s0038g01970.t01 | Wine grape | cytosol | 26.16 | 59.9 |
| Zm00001d004287_P001 | Maize | cytosol | 39.24 | 59.24 |
| AT4G34880.2 | Thale cress | vacuole | 63.92 | 59.18 |
| HORVU2Hr1G004020.1 | Barley | cytosol, mitochondrion | 7.38 | 58.33 |
| CDX75471 | Canola | cytosol | 24.26 | 58.08 |
| TraesCS2B01G037200.1 | Wheat | plastid | 36.71 | 55.95 |
| CDX75470 | Canola | plastid | 35.02 | 54.61 |
| TraesCS2B01G037500.1 | Wheat | cytosol, plastid | 41.98 | 54.52 |
| TraesCS2A01G025200.1 | Wheat | extracellular | 58.44 | 54.21 |
| HORVU1Hr1G091420.1 | Barley | cytosol, plastid | 46.62 | 53.9 |
| EES11861 | Sorghum | extracellular, golgi, plasma membrane | 58.23 | 53.8 |
| TraesCS1B01G448000.1 | Wheat | extracellular, vacuole | 58.23 | 53.38 |
| TraesCS1D01G425500.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 58.23 | 53.38 |
| TraesCSU01G008400.1 | Wheat | extracellular, golgi | 56.75 | 52.95 |
| TraesCS3D01G364700.2 | Wheat | extracellular, vacuole | 56.12 | 52.67 |
| TraesCS2D01G062200.1 | Wheat | cytosol | 34.6 | 52.56 |
| HORVU5Hr1G087780.4 | Barley | extracellular, golgi | 56.12 | 52.47 |
| TraesCS2A01G064000.1 | Wheat | extracellular, vacuole | 56.12 | 52.47 |
| TraesCS2B01G035200.1 | Wheat | cytosol | 54.01 | 52.24 |
| TraesCS2B01G037800.1 | Wheat | extracellular | 32.28 | 52.04 |
| TraesCS2B01G037400.1 | Wheat | nucleus | 55.06 | 51.89 |
| KXG36216 | Sorghum | cytosol | 53.8 | 51.62 |
| TraesCS2B01G035900.1 | Wheat | extracellular, golgi | 54.64 | 51.49 |
| TraesCS2B01G037100.1 | Wheat | golgi | 55.06 | 51.38 |
| TraesCSU01G233300.1 | Wheat | extracellular, golgi | 35.44 | 51.38 |
| TraesCS2D01G027000.1 | Wheat | golgi, plasma membrane, vacuole | 55.06 | 51.28 |
| TraesCS2B01G036000.1 | Wheat | cytosol | 30.38 | 51.25 |
| TraesCS2D01G026300.1 | Wheat | cytosol | 54.43 | 51.19 |
| TraesCS2D01G026900.1 | Wheat | extracellular, golgi | 53.8 | 50.9 |
| TraesCS2A01G025000.1 | Wheat | golgi, plasma membrane, vacuole | 54.64 | 50.88 |
| TraesCS1A01G417900.1 | Wheat | endoplasmic reticulum, golgi | 52.95 | 50.81 |
| EER97209 | Sorghum | extracellular | 54.64 | 50.78 |
| HORVU2Hr1G003980.8 | Barley | cytosol | 41.14 | 50.65 |
| TraesCS2D01G027200.1 | Wheat | cytosol | 56.33 | 50.47 |
| EER99375 | Sorghum | extracellular | 54.22 | 50.39 |
| TraesCSU01G211000.1 | Wheat | cytosol | 28.27 | 49.63 |
| KXG38675 | Sorghum | endoplasmic reticulum, vacuole | 56.33 | 49.17 |
| TraesCS2B01G035800.1 | Wheat | vacuole | 49.79 | 48.46 |
| TraesCS2B01G036100.1 | Wheat | cytosol | 20.46 | 48.02 |
| EES10484 | Sorghum | golgi, vacuole | 49.58 | 47.57 |
| HORVU2Hr1G003810.1 | Barley | extracellular, mitochondrion | 24.05 | 44.36 |
| VIT_03s0038g01990.t01 | Wine grape | nucleus, peroxisome, plastid | 55.7 | 44.22 |
| VIT_03s0038g02000.t01 | Wine grape | plasma membrane | 91.56 | 42.3 |
| Zm00001d004288_P001 | Maize | extracellular | 16.24 | 39.9 |
| GSMUA_Achr2P11220_001 | Banana | endoplasmic reticulum | 58.65 | 39.15 |
| EES11858 | Sorghum | extracellular | 6.54 | 38.75 |
| HORVU2Hr1G003990.5 | Barley | cytosol | 42.41 | 38.29 |
| HORVU2Hr1G004030.1 | Barley | cytosol | 10.97 | 35.62 |
| HORVU1Hr1G091390.1 | Barley | cytosol, extracellular | 8.65 | 25.15 |
Protein Annotations
| KEGG:00970+6.3.5.7 | Gene3D:3.90.1300.10 | MapMan:35.1 | InterPro:AS_sf | InterPro:Amidase_dom | ProteinID:CCB60639 |
| ProteinID:CCB60639.1 | UniProt:F6I123 | EMBL:FN596508 | InterPro:IPR036928 | PFAM:PF01425 | PANTHER:PTHR42678 |
| PANTHER:PTHR42678:SF10 | SUPFAM:SSF75304 | SignalP:SignalP-noTM | UniParc:UPI000210AA82 | ArrayExpress:VIT_03s0038g02010 | EnsemblPlantsGene:VIT_03s0038g02010 |
| EnsemblPlants:VIT_03s0038g02010.t01 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr3:+:1393183..1395922
Molecular Weight (calculated)
50997.7 Da
IEP (calculated)
9.572
GRAVY (calculated)
0.048
Length
474 amino acids
Sequence
(BLAST)
(BLAST)
001: MSIHFHVSTL FLLPLVLLPS GSIAITGHAF SIEEATVHDF HMAFEQNKLT SRQLVEFYLG KIHKLNPILR GVIEDNIATK DKMNTTAGSF ALLKSVVPRD
101: AGVVRKLRKA GAIILGKASL SEWAAFRATA TPSGWCARTG QGKNPYVLSA TPCGSSSGSA ISVAANLAAV SLGTETDGSI LCPSHINSVV GIKPTLGLTS
201: RAGVVPISPR QDTVGPICRT VSDAVEVLDV IVGFDYRDEA TRTASKYIPQ GGYKQFLNAN GLKGKRLGIV RNPFYMFGNG SVLPQVFEHH FHTLRQGGAI
301: LVDHLEIANI DVIYGSSGEY AALEAEFKTS LNAYLKELVA SPVRTLADVI AFNNKFSHLE KIKEYGQDIF LQAEATNGIN KKTLLKLARL SRNGFEKLMK
401: EHKLDALVTP GSDVRTILAI GGFPGISVPA GYDSEGVPFG ICFGGLKGSE PKLIEIAYSF EQATKIRKPP SFKP
101: AGVVRKLRKA GAIILGKASL SEWAAFRATA TPSGWCARTG QGKNPYVLSA TPCGSSSGSA ISVAANLAAV SLGTETDGSI LCPSHINSVV GIKPTLGLTS
201: RAGVVPISPR QDTVGPICRT VSDAVEVLDV IVGFDYRDEA TRTASKYIPQ GGYKQFLNAN GLKGKRLGIV RNPFYMFGNG SVLPQVFEHH FHTLRQGGAI
301: LVDHLEIANI DVIYGSSGEY AALEAEFKTS LNAYLKELVA SPVRTLADVI AFNNKFSHLE KIKEYGQDIF LQAEATNGIN KKTLLKLARL SRNGFEKLMK
401: EHKLDALVTP GSDVRTILAI GGFPGISVPA GYDSEGVPFG ICFGGLKGSE PKLIEIAYSF EQATKIRKPP SFKP
001: MVALRFFFFS SLLILLILSQ ALIMSVGSAS QIRLSSTFSI QEATIEDIRV AFNEKRLTSK QLVELYLEAI SKLNPILHAV IETNPDALIQ AEIADRERDL
101: KNTTKLPILH GVPVLLKDSI STKDKLNTTA GSFALLGSVV ARDAGVVKRL RESGAVILGK ASLSEWAHFR SFSIPDGWSA RGLQGKNPYV LSANPSGSSS
201: GSAISVTANL VAVSLGTETD GSILSPASQN SVVGIKPSVG LTSRAGVVPI SLRQDSIGPI CRTVSDAVHL LDAIVGYDPL DEATKTASEF IPEGGYKQFL
301: TTSGLKGKRL GIVMKHSSLL DHHIKTLRRE GAIVINNLTI PNIEVIVGGT DSGEEIALLA EFKMSLNAYL KELVKSPVRS LADVIAYNEE FAEQEKVKEW
401: GQEVFLTAEA TSGMGEKEKT ALQKMKELSR NGIEKLIEEN KLDAIVTLGS DLSSVLAIGG YPGINVPAGY DSGGVPYGIS FGGLRFSEPK LIEIAFAFEQ
501: ATLIRKPPKF IA
101: KNTTKLPILH GVPVLLKDSI STKDKLNTTA GSFALLGSVV ARDAGVVKRL RESGAVILGK ASLSEWAHFR SFSIPDGWSA RGLQGKNPYV LSANPSGSSS
201: GSAISVTANL VAVSLGTETD GSILSPASQN SVVGIKPSVG LTSRAGVVPI SLRQDSIGPI CRTVSDAVHL LDAIVGYDPL DEATKTASEF IPEGGYKQFL
301: TTSGLKGKRL GIVMKHSSLL DHHIKTLRRE GAIVINNLTI PNIEVIVGGT DSGEEIALLA EFKMSLNAYL KELVKSPVRS LADVIAYNEE FAEQEKVKEW
401: GQEVFLTAEA TSGMGEKEKT ALQKMKELSR NGIEKLIEEN KLDAIVTLGS DLSSVLAIGG YPGINVPAGY DSGGVPYGIS FGGLRFSEPK LIEIAFAFEQ
501: ATLIRKPPKF IA
Arabidopsis Description
Amidase family protein [Source:TAIR;Acc:AT4G34880]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.