Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plasma membrane 4
- extracellular 7
- endoplasmic reticulum 4
- vacuole 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400004114 | Potato | plastid | 26.19 | 52.38 |
| TraesCS2A01G025200.1 | Wheat | extracellular | 86.73 | 49.9 |
| CDX75470 | Canola | plastid | 49.32 | 47.7 |
| TraesCS2B01G037100.1 | Wheat | golgi | 78.57 | 45.47 |
| Bra011569.1-P | Field mustard | cytosol | 54.42 | 43.96 |
| TraesCS2B01G037400.1 | Wheat | nucleus | 71.77 | 41.95 |
| TraesCS2B01G035900.1 | Wheat | extracellular, golgi | 70.75 | 41.35 |
| TraesCS2B01G035800.1 | Wheat | vacuole | 67.69 | 40.86 |
| TraesCS2B01G035200.1 | Wheat | cytosol | 67.01 | 40.2 |
| VIT_03s0038g02040.t01 | Wine grape | extracellular | 60.54 | 34.63 |
| VIT_03s0038g02030.t01 | Wine grape | mitochondrion | 54.76 | 34.55 |
| CDY28936 | Canola | plastid | 45.92 | 34.26 |
| Bra022128.1-P | Field mustard | endoplasmic reticulum, vacuole | 57.82 | 34.21 |
| Solyc01g111220.2.1 | Tomato | extracellular | 58.84 | 33.79 |
| PGSC0003DMT400005106 | Potato | extracellular | 48.3 | 33.49 |
| AT4G34880.2 | Thale cress | vacuole | 57.82 | 33.2 |
| KRH42701 | Soybean | cytosol | 55.1 | 33.06 |
| CDY51679 | Canola | endoplasmic reticulum, vacuole | 52.72 | 33.05 |
| KRH42704 | Soybean | cytosol | 23.47 | 32.86 |
| VIT_03s0038g02010.t01 | Wine grape | extracellular, vacuole | 52.04 | 32.28 |
| Os06t0271300-00 | Rice | cytosol, plastid | 58.84 | 32.16 |
| TraesCS1B01G448000.1 | Wheat | extracellular, vacuole | 56.12 | 31.91 |
| Solyc11g071550.1.1 | Tomato | extracellular, nucleus | 54.76 | 31.82 |
| PGSC0003DMT400048145 | Potato | extracellular | 53.4 | 31.09 |
| PGSC0003DMT400004112 | Potato | extracellular | 57.48 | 31.07 |
| KRH58810 | Soybean | nucleus | 54.42 | 30.89 |
| CDX69095 | Canola | cytosol | 40.14 | 30.18 |
| TraesCS2B01G037500.1 | Wheat | cytosol, plastid | 35.37 | 28.49 |
| VIT_03s0038g01970.t01 | Wine grape | cytosol | 19.05 | 27.05 |
| TraesCS2B01G036000.1 | Wheat | cytosol | 25.17 | 26.33 |
| GSMUA_Achr2P11220_001 | Banana | endoplasmic reticulum | 60.88 | 25.21 |
| TraesCS2B01G037200.1 | Wheat | plastid | 26.19 | 24.76 |
| Os04t0183300-01 | Rice | cytosol | 26.19 | 24.37 |
| VIT_03s0038g02020.t01 | Wine grape | mitochondrion | 19.73 | 22.57 |
| HORVU2Hr1G003990.5 | Barley | cytosol | 36.05 | 20.19 |
| VIT_03s0038g01990.t01 | Wine grape | nucleus, peroxisome, plastid | 38.78 | 19.1 |
| VIT_03s0038g02000.t01 | Wine grape | plasma membrane | 57.48 | 16.47 |
| KRH42703 | Soybean | cytosol, extracellular | 0.68 | 2.22 |
| TraesCS2B01G036100.1 | Wheat | cytosol | 1.02 | 1.49 |
| CDX75471 | Canola | cytosol | 0.34 | 0.51 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G037800.1 | EnsemblPlantsGene:TraesCS2B01G037800 | Gene3D:3.90.1300.10 | InterPro:AS_sf | InterPro:Amidase_dom | InterPro:IPR036928 |
| KEGG:00970+6.3.5.7 | PANTHER:PTHR42678 | PFAM:PF01425 | SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF75304 |
| TMHMM:TMhelix | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr2B:+:17518439..17520501
Molecular Weight (calculated)
30628.6 Da
IEP (calculated)
8.492
GRAVY (calculated)
0.099
Length
294 amino acids
Sequence
(BLAST)
(BLAST)
001: MARPLLAVAA ALMLLLFAAA GAHGFEIEEA TVASIQLGFN NGSLTSVDLV RFYLDRIRGL NPLLRAVIEV NPGTVQQAAR ADAERRSSSS GKCGALHGVP
101: VLLKDNIATR DTLNTTAGSF ALLGSVARRD AGVVRRLRRA GAVVLGKANM DEWANFCSLA GTDGWSARGG QARNPYVLSA SPCGSSTGST IAAAASMAAV
201: TLGTETDGSI LCPASLNSVV GIKPTVGLTS RAGVVPITPR QDTIGPICRT VTDAVHVLDA IVGYDELDGA AMSAASKYIP HEDRWTKREE DRRS
101: VLLKDNIATR DTLNTTAGSF ALLGSVARRD AGVVRRLRRA GAVVLGKANM DEWANFCSLA GTDGWSARGG QARNPYVLSA SPCGSSTGST IAAAASMAAV
201: TLGTETDGSI LCPASLNSVV GIKPTVGLTS RAGVVPITPR QDTIGPICRT VTDAVHVLDA IVGYDELDGA AMSAASKYIP HEDRWTKREE DRRS
001: MVALRFFFFS SLLILLILSQ ALIMSVGSAS QIRLSSTFSI QEATIEDIRV AFNEKRLTSK QLVELYLEAI SKLNPILHAV IETNPDALIQ AEIADRERDL
101: KNTTKLPILH GVPVLLKDSI STKDKLNTTA GSFALLGSVV ARDAGVVKRL RESGAVILGK ASLSEWAHFR SFSIPDGWSA PSQNSVVGIK PSVGLTSRAG
201: VVPISLRQDS IGPICRTVSD AVHLLDAIVG YDPLDEATKT ASEFIPEGGY KQFLTTSGLK GKRLGIVMKH SSLLDHHIKT LRREGAIVIN NLTIPNIEVI
301: VGGTDSGEEI ALLAEFKMSL NAYLKELVKS PVRSLADVIA YNEEFAEQEK VKEWGQEVFL TAEATSGMGE KEKTALQKMK ELSRNGIEKL IEENKLDAIV
401: TLGSDLSSVL AIGGYPGINV PAGYDSGGVP YGISFGGLRF SEPKLIEIAF AFEQATLIRK PPKFIA
101: KNTTKLPILH GVPVLLKDSI STKDKLNTTA GSFALLGSVV ARDAGVVKRL RESGAVILGK ASLSEWAHFR SFSIPDGWSA PSQNSVVGIK PSVGLTSRAG
201: VVPISLRQDS IGPICRTVSD AVHLLDAIVG YDPLDEATKT ASEFIPEGGY KQFLTTSGLK GKRLGIVMKH SSLLDHHIKT LRREGAIVIN NLTIPNIEVI
301: VGGTDSGEEI ALLAEFKMSL NAYLKELVKS PVRSLADVIA YNEEFAEQEK VKEWGQEVFL TAEATSGMGE KEKTALQKMK ELSRNGIEKL IEENKLDAIV
401: TLGSDLSSVL AIGGYPGINV PAGYDSGGVP YGISFGGLRF SEPKLIEIAF AFEQATLIRK PPKFIA
Arabidopsis Description
Amidase family protein [Source:TAIR;Acc:AT4G34880]
SUBAcon: [vacuole,endoplasmic reticulum]
SUBAcon: [vacuole,endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.