Factsheet for TraesCS2B01G035200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G036100.1	Wheat	cytosol	38.37	93.07
TraesCS2D01G026300.1	Wheat	cytosol	93.67	91.07
HORVU5Hr1G087780.4	Barley	extracellular, golgi	87.96	85.01
TraesCS2B01G036000.1	Wheat	cytosol	48.16	83.99
TraesCS2B01G037400.1	Wheat	nucleus	80.0	77.93
TraesCS2B01G037200.1	Wheat	plastid	48.98	77.17
TraesCS2B01G035900.1	Wheat	extracellular, golgi	78.98	76.94
Os04t0184100-01	Rice	extracellular	72.45	70.44
Os04t0183500-01	Rice	extracellular, plasma membrane	71.63	69.78
TraesCS2B01G037800.1	Wheat	extracellular	40.2	67.01
TraesCS2B01G037100.1	Wheat	golgi	68.16	65.75
TraesCS2B01G037500.1	Wheat	cytosol, plastid	48.37	64.93
TraesCS2B01G035800.1	Wheat	vacuole	63.88	64.27
Os04t0182875-00	Rice	extracellular	24.9	63.87
Os04t0184500-00	Rice	cytosol, plastid	23.06	63.13
Zm00001d004288_P001	Maize	extracellular	24.49	62.18
CDY28936	Canola	plastid	48.98	60.91
PGSC0003DMT400004114	Potato	plastid	17.55	58.5
Bra011569.1-P	Field mustard	cytosol	43.06	57.97
VIT_03s0038g02030.t01	Wine grape	mitochondrion	54.69	57.51
VIT_03s0038g02040.t01	Wine grape	extracellular	59.18	56.42
CDY51679	Canola	endoplasmic reticulum, vacuole	53.47	55.86
Bra022128.1-P	Field mustard	endoplasmic reticulum, vacuole	56.33	55.53
KRH42701	Soybean	cytosol	55.31	55.31
TraesCS1B01G448000.1	Wheat	extracellular, vacuole	57.76	54.74
CDX69095	Canola	cytosol	43.27	54.22
VIT_03s0038g02010.t01	Wine grape	extracellular, vacuole	52.24	54.01
PGSC0003DMT400005106	Potato	extracellular	46.33	53.54
Solyc01g111220.2.1	Tomato	extracellular	55.51	53.12
Solyc11g071550.1.1	Tomato	extracellular, nucleus	54.49	52.77
KRH58810	Soybean	nucleus	55.51	52.51
PGSC0003DMT400048145	Potato	extracellular	54.08	52.48
AT4G34880.2	Thale cress	vacuole	53.88	51.56
PGSC0003DMT400004112	Potato	extracellular	55.31	49.82
KRH42704	Soybean	cytosol	21.22	49.52
KRH42703	Soybean	cytosol, extracellular	8.98	48.89
VIT_03s0038g01970.t01	Wine grape	cytosol	20.61	48.79
CDX75470	Canola	plastid	29.39	47.37
CDX75471	Canola	cytosol	18.78	46.46
VIT_03s0038g02020.t01	Wine grape	mitochondrion	22.65	43.19
GSMUA_Achr2P11220_001	Banana	endoplasmic reticulum	57.76	39.86
Os01t0115200-00	Rice	mitochondrion, plastid	12.45	39.1
VIT_03s0038g01990.t01	Wine grape	nucleus, peroxisome, plastid	44.69	36.68
VIT_03s0038g02000.t01	Wine grape	plasma membrane	57.35	27.39

Protein Annotations

EnsemblPlants:TraesCS2B01G035200.1	EnsemblPlantsGene:TraesCS2B01G035200	Gene3D:3.90.1300.10	InterPro:AS_sf	InterPro:Amidase_dom	InterPro:IPR036928
KEGG:00970+6.3.5.7	PANTHER:PTHR42678	PANTHER:PTHR42678:SF3	PFAM:PF01425	SEG:seg	SUPFAM:SSF75304
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr2B:-:16969056..16970817

Molecular Weight (calculated)

51642.9 Da

IEP (calculated)

6.755

GRAVY (calculated)

-0.002

Length

490 amino acids

Sequence
(BLAST)

001: MADDGAAHGF EFHEATVDTI QLGFSNGTLT STALVQFYLD QIDRLNPLLH AVIEVNPDAL PQAKHADAER HGGTATGALH GVPILLKDNI ATRDALSTTA
101: GSLALLGSMV KRDAGVVARL RRAGAVVLGK ASLSEWANFR PVDNGWSARG GQARNPYVLS STPCGSSAGS GVAAAANMAA VTLGTETDGS ILCPSSFNSV
201: VGIKPTLGLT SRAGVVPITP LQDTVGPMCR TVSDAVHVLD TIVGYDEHDA AATGAASKYI PQGGYAEFLK KDGLRGKRIG VPNGFVQRYG QKQLNVYKQH
301: LATMRELGAV VIEKLDVAAN LSALLGEIGS NEAIAMQAEF KLSINAYLAD LVHSPVHSLA DIIAFNKAHP VEERLKDFGQ PDLIAAESTN GIGPAERAAI
401: RRLKELNANG LEKMMKEHQL DAIVAPNNAI SSLLAIGGHP GIVVPAGYDE KGVPFGICFG GLQGYEPRLI EMAYAFEQAT KVRRQPMFKT

Best Arabidopsis Sequence Match ( AT4G34880.1 )
(BLAST)

001: MVALRFFFFS SLLILLILSQ ALIMSVGSAS QIRLSSTFSI QEATIEDIRV AFNEKRLTSK QLVELYLEAI SKLNPILHAV IETNPDALIQ AEIADRERDL
101: KNTTKLPILH GVPVLLKDSI STKDKLNTTA GSFALLGSVV ARDAGVVKRL RESGAVILGK ASLSEWAHFR SFSIPDGWSA PSQNSVVGIK PSVGLTSRAG
201: VVPISLRQDS IGPICRTVSD AVHLLDAIVG YDPLDEATKT ASEFIPEGGY KQFLTTSGLK GKRLGIVMKH SSLLDHHIKT LRREGAIVIN NLTIPNIEVI
301: VGGTDSGEEI ALLAEFKMSL NAYLKELVKS PVRSLADVIA YNEEFAEQEK VKEWGQEVFL TAEATSGMGE KEKTALQKMK ELSRNGIEKL IEENKLDAIV
401: TLGSDLSSVL AIGGYPGINV PAGYDSGGVP YGISFGGLRF SEPKLIEIAF AFEQATLIRK PPKFIA

Arabidopsis Description

Amidase family protein [Source:TAIR;Acc:AT4G34880]
SUBAcon: [vacuole,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.