Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 2
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G004030.1 | Barley | cytosol | 35.05 | 74.66 |
| TraesCS2B01G036000.1 | Wheat | cytosol | 64.63 | 71.53 |
| TraesCS2B01G036100.1 | Wheat | cytosol | 45.02 | 69.31 |
| TraesCS2B01G035900.1 | Wheat | extracellular, golgi | 97.75 | 60.44 |
| TraesCS2B01G037400.1 | Wheat | nucleus | 95.18 | 58.85 |
| TraesCS2D01G026900.1 | Wheat | extracellular, golgi | 90.68 | 56.29 |
| TraesCS2B01G037500.1 | Wheat | cytosol, plastid | 64.63 | 55.07 |
| KRH42703 | Soybean | cytosol, extracellular | 15.43 | 53.33 |
| VIT_03s0038g01970.t01 | Wine grape | cytosol | 34.41 | 51.69 |
| TraesCS2B01G035200.1 | Wheat | cytosol | 77.17 | 48.98 |
| CDX75471 | Canola | cytosol | 29.58 | 46.46 |
| CDY28936 | Canola | plastid | 55.95 | 44.16 |
| Os04t0184100-01 | Rice | extracellular | 69.13 | 42.66 |
| KRH42704 | Soybean | cytosol | 28.62 | 42.38 |
| PGSC0003DMT400004114 | Potato | plastid | 19.94 | 42.18 |
| TraesCS2B01G035800.1 | Wheat | vacuole | 64.63 | 41.27 |
| Os04t0183500-01 | Rice | extracellular, plasma membrane | 65.27 | 40.36 |
| TraesCS2B01G037100.1 | Wheat | golgi | 63.34 | 38.78 |
| CDY51679 | Canola | endoplasmic reticulum, vacuole | 56.27 | 37.31 |
| VIT_03s0038g02030.t01 | Wine grape | mitochondrion | 55.31 | 36.91 |
| CDX69095 | Canola | cytosol | 46.3 | 36.83 |
| VIT_03s0038g02010.t01 | Wine grape | extracellular, vacuole | 55.95 | 36.71 |
| KRH42701 | Soybean | cytosol | 56.27 | 35.71 |
| TraesCS1B01G448000.1 | Wheat | extracellular, vacuole | 58.84 | 35.4 |
| Bra022128.1-P | Field mustard | endoplasmic reticulum, vacuole | 55.95 | 35.01 |
| PGSC0003DMT400005106 | Potato | extracellular | 47.59 | 34.91 |
| VIT_03s0038g02040.t01 | Wine grape | extracellular | 57.23 | 34.63 |
| Solyc11g071550.1.1 | Tomato | extracellular, nucleus | 54.98 | 33.79 |
| KRH58810 | Soybean | nucleus | 55.95 | 33.59 |
| PGSC0003DMT400048145 | Potato | extracellular | 54.34 | 33.47 |
| TraesCSU01G233300.1 | Wheat | extracellular, golgi | 34.08 | 32.42 |
| AT4G34880.2 | Thale cress | vacuole | 52.73 | 32.03 |
| Solyc01g111220.2.1 | Tomato | extracellular | 52.41 | 31.84 |
| PGSC0003DMT400004112 | Potato | extracellular | 52.73 | 30.15 |
| Bra011569.1-P | Field mustard | cytosol | 35.05 | 29.95 |
| VIT_03s0038g01990.t01 | Wine grape | nucleus, peroxisome, plastid | 54.02 | 28.14 |
| GSMUA_Achr2P11220_001 | Banana | endoplasmic reticulum | 60.45 | 26.48 |
| TraesCS2B01G037800.1 | Wheat | extracellular | 24.76 | 26.19 |
| VIT_03s0038g02020.t01 | Wine grape | mitochondrion | 21.22 | 25.68 |
| CDX75470 | Canola | plastid | 20.9 | 21.38 |
| VIT_03s0038g02000.t01 | Wine grape | plasma membrane | 56.27 | 17.06 |
| Zm00001d004288_P001 | Maize | extracellular | 3.54 | 5.7 |
| Os04t0182875-00 | Rice | extracellular | 1.61 | 2.62 |
| Os04t0184500-00 | Rice | cytosol, plastid | 0.96 | 1.68 |
| Os01t0115200-00 | Rice | mitochondrion, plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G037200.1 | EnsemblPlantsGene:TraesCS2B01G037200 | Gene3D:3.90.1300.10 | InterPro:AS_sf | InterPro:Amidase_dom | InterPro:IPR036928 |
| KEGG:00970+6.3.5.7 | PANTHER:PTHR42678 | PANTHER:PTHR42678:SF3 | PFAM:PF01425 | SUPFAM:SSF75304 | MapMan:35.1 |
Description
No Description!
Coordinates
chr2B:+:17459482..17460927
Molecular Weight (calculated)
34428.7 Da
IEP (calculated)
8.435
GRAVY (calculated)
-0.118
Length
311 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAVTLGTET DGSILCPSSF NSVVGIKPTV GLTSRAGVVP ITPRQDSVGP MCRTVSDAVH VLDAIVGYDK LDATATRAAS KYIPHGGYLQ FLKKDRLRGK
101: RIGVPNKFFL FQGFGEKQMR VYKLHLATMR KHGAMVIENL DIATDSQDIV SNEWTAMLTE FELSINEYLV DLSYSPVHSL ADIIAFNKAH PIEERLKDFG
201: QQNLILAQNT NGIDRLERAR IRWLKELSVN GLEKLMKEHQ LDAIVAPEHY ASNHLAIGGY PGIVVPAGYN EKGVPFGICF GGLQGYEPRL IEIAYAFEQA
301: TKVRRPPMFK P
101: RIGVPNKFFL FQGFGEKQMR VYKLHLATMR KHGAMVIENL DIATDSQDIV SNEWTAMLTE FELSINEYLV DLSYSPVHSL ADIIAFNKAH PIEERLKDFG
201: QQNLILAQNT NGIDRLERAR IRWLKELSVN GLEKLMKEHQ LDAIVAPEHY ASNHLAIGGY PGIVVPAGYN EKGVPFGICF GGLQGYEPRL IEIAYAFEQA
301: TKVRRPPMFK P
001: MVALRFFFFS SLLILLILSQ ALIMSVGSAS QIRLSSTFSI QEATIEDIRV AFNEKRLTSK QLVELYLEAI SKLNPILHAV IETNPDALIQ AEIADRERDL
101: KNTTKLPILH GVPVLLKDSI STKDKLNTTA GSFALLGSVV ARDAGVVKRL RESGAVILGK ASLSEWAHFR SFSIPDGWSA PSQNSVVGIK PSVGLTSRAG
201: VVPISLRQDS IGPICRTVSD AVHLLDAIVG YDPLDEATKT ASEFIPEGGY KQFLTTSGLK GKRLGIVMKH SSLLDHHIKT LRREGAIVIN NLTIPNIEVI
301: VGGTDSGEEI ALLAEFKMSL NAYLKELVKS PVRSLADVIA YNEEFAEQEK VKEWGQEVFL TAEATSGMGE KEKTALQKMK ELSRNGIEKL IEENKLDAIV
401: TLGSDLSSVL AIGGYPGINV PAGYDSGGVP YGISFGGLRF SEPKLIEIAF AFEQATLIRK PPKFIA
101: KNTTKLPILH GVPVLLKDSI STKDKLNTTA GSFALLGSVV ARDAGVVKRL RESGAVILGK ASLSEWAHFR SFSIPDGWSA PSQNSVVGIK PSVGLTSRAG
201: VVPISLRQDS IGPICRTVSD AVHLLDAIVG YDPLDEATKT ASEFIPEGGY KQFLTTSGLK GKRLGIVMKH SSLLDHHIKT LRREGAIVIN NLTIPNIEVI
301: VGGTDSGEEI ALLAEFKMSL NAYLKELVKS PVRSLADVIA YNEEFAEQEK VKEWGQEVFL TAEATSGMGE KEKTALQKMK ELSRNGIEKL IEENKLDAIV
401: TLGSDLSSVL AIGGYPGINV PAGYDSGGVP YGISFGGLRF SEPKLIEIAF AFEQATLIRK PPKFIA
Arabidopsis Description
Amidase family protein [Source:TAIR;Acc:AT4G34880]
SUBAcon: [vacuole,endoplasmic reticulum]
SUBAcon: [vacuole,endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.