Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX75470 | Canola | plastid | 56.87 | 68.09 |
| PGSC0003DMT400004114 | Potato | plastid | 25.0 | 61.9 |
| CDX69095 | Canola | cytosol | 66.21 | 61.64 |
| AT4G34880.2 | Thale cress | vacuole | 82.97 | 58.98 |
| Bra022128.1-P | Field mustard | endoplasmic reticulum, vacuole | 78.3 | 57.34 |
| TraesCSU01G233300.1 | Wheat | extracellular, golgi | 49.73 | 55.35 |
| TraesCS2B01G037800.1 | Wheat | extracellular | 43.96 | 54.42 |
| Zm00001d004288_P001 | Maize | extracellular | 28.85 | 54.4 |
| VIT_03s0038g01970.t01 | Wine grape | cytosol | 29.12 | 51.21 |
| VIT_03s0038g02030.t01 | Wine grape | mitochondrion | 62.64 | 48.93 |
| VIT_03s0038g02040.t01 | Wine grape | extracellular | 68.13 | 48.25 |
| HORVU2Hr1G003810.1 | Barley | extracellular, mitochondrion | 34.07 | 48.25 |
| VIT_03s0038g02010.t01 | Wine grape | extracellular, vacuole | 60.44 | 46.41 |
| KRH42704 | Soybean | cytosol | 26.65 | 46.19 |
| KRH42701 | Soybean | cytosol | 60.99 | 45.31 |
| Solyc01g111220.2.1 | Tomato | extracellular | 62.09 | 44.14 |
| TraesCS2D01G026900.1 | Wheat | extracellular, golgi | 59.89 | 43.51 |
| EES11861 | Sorghum | extracellular, golgi, plasma membrane | 61.26 | 43.47 |
| TraesCS2B01G037400.1 | Wheat | nucleus | 59.62 | 43.14 |
| TraesCS2B01G035200.1 | Wheat | cytosol | 57.97 | 43.06 |
| TraesCS2B01G035900.1 | Wheat | extracellular, golgi | 59.07 | 42.74 |
| TraesCS3D01G364700.2 | Wheat | extracellular, vacuole | 59.07 | 42.57 |
| PGSC0003DMT400048145 | Potato | extracellular | 59.07 | 42.57 |
| KXG36216 | Sorghum | cytosol | 57.69 | 42.51 |
| TraesCSU01G008400.1 | Wheat | extracellular, golgi | 59.07 | 42.32 |
| KRH58810 | Soybean | nucleus | 60.16 | 42.28 |
| TraesCS2A01G025200.1 | Wheat | extracellular | 59.34 | 42.27 |
| TraesCS2D01G026300.1 | Wheat | cytosol | 58.24 | 42.06 |
| TraesCS2D01G027000.1 | Wheat | golgi, plasma membrane, vacuole | 58.52 | 41.85 |
| TraesCS2A01G025000.1 | Wheat | golgi, plasma membrane, vacuole | 58.52 | 41.85 |
| TraesCS2A01G064000.1 | Wheat | extracellular, vacuole | 58.24 | 41.81 |
| TraesCS2B01G037100.1 | Wheat | golgi | 58.24 | 41.73 |
| Solyc11g071550.1.1 | Tomato | extracellular, nucleus | 57.97 | 41.7 |
| HORVU5Hr1G087780.4 | Barley | extracellular, golgi | 57.97 | 41.62 |
| PGSC0003DMT400004112 | Potato | extracellular | 61.54 | 41.18 |
| TraesCS1A01G417900.1 | Wheat | endoplasmic reticulum, golgi | 55.77 | 41.09 |
| VIT_03s0038g02020.t01 | Wine grape | mitochondrion | 28.85 | 40.86 |
| EER97209 | Sorghum | extracellular | 56.87 | 40.59 |
| EER99375 | Sorghum | extracellular | 56.59 | 40.39 |
| PGSC0003DMT400005106 | Potato | extracellular | 46.7 | 40.09 |
| TraesCS2D01G027200.1 | Wheat | cytosol | 57.97 | 39.89 |
| EES10484 | Sorghum | golgi, vacuole | 54.12 | 39.88 |
| TraesCS1D01G425500.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 56.32 | 39.65 |
| TraesCS1B01G448000.1 | Wheat | extracellular, vacuole | 56.32 | 39.65 |
| TraesCS2B01G035800.1 | Wheat | vacuole | 51.65 | 38.6 |
| KXG38675 | Sorghum | endoplasmic reticulum, vacuole | 55.77 | 37.38 |
| Zm00001d004287_P001 | Maize | cytosol | 31.87 | 36.94 |
| TraesCS2B01G036000.1 | Wheat | cytosol | 28.3 | 36.65 |
| TraesCS2B01G037500.1 | Wheat | cytosol, plastid | 36.54 | 36.44 |
| TraesCS2B01G037200.1 | Wheat | plastid | 29.95 | 35.05 |
| HORVU1Hr1G091420.1 | Barley | cytosol, plastid | 39.29 | 34.88 |
| CDX75471 | Canola | cytosol | 17.86 | 32.83 |
| TraesCS2D01G062200.1 | Wheat | cytosol | 27.2 | 31.73 |
| Os11t0123033-01 | Rice | plastid | 17.58 | 31.22 |
| HORVU2Hr1G003980.8 | Barley | cytosol | 32.69 | 30.91 |
| HORVU2Hr1G004030.1 | Barley | cytosol | 12.36 | 30.82 |
| VIT_03s0038g01990.t01 | Wine grape | nucleus, peroxisome, plastid | 48.63 | 29.65 |
| GSMUA_Achr2P11220_001 | Banana | endoplasmic reticulum | 56.32 | 28.87 |
| TraesCSU01G211000.1 | Wheat | cytosol | 20.05 | 27.04 |
| HORVU1Hr1G091390.1 | Barley | cytosol, extracellular | 12.09 | 26.99 |
| HORVU2Hr1G003990.5 | Barley | cytosol | 35.99 | 24.95 |
| VIT_03s0038g02000.t01 | Wine grape | plasma membrane | 67.31 | 23.88 |
| TraesCS2B01G036100.1 | Wheat | cytosol | 9.89 | 17.82 |
| HORVU2Hr1G004020.1 | Barley | cytosol, mitochondrion | 1.37 | 8.33 |
| EES11858 | Sorghum | extracellular | 0.55 | 2.5 |
| KRH42703 | Soybean | cytosol, extracellular | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Bra011569.1 | EnsemblPlants:Bra011569.1-P | EnsemblPlantsGene:Bra011569 | Gene3D:3.90.1300.10 | InterPro:AS_sf | InterPro:Amidase_dom |
| InterPro:IPR036928 | KEGG:00970+6.3.5.7 | ncoils:Coil | PANTHER:PTHR42678 | PANTHER:PTHR42678:SF9 | PFAM:PF01425 |
| SEG:seg | SUPFAM:SSF75304 | UniParc:UPI0002545508 | UniProt:M4D512 | MapMan:35.1 | : |
Description
AT4G34880 (E=3e-072) | amidase family protein
Coordinates
chrA01:-:1643042..1644735
Molecular Weight (calculated)
39319.4 Da
IEP (calculated)
6.943
GRAVY (calculated)
0.028
Length
364 amino acids
Sequence
(BLAST)
(BLAST)
001: MLTSTFSIQE ATIQDIRLAF NEKRLTSKQL VEFYLEEISN LNPILFAVIE TNPDALIQAE KADREREVKD VTTELPFLHG VPILLKDLIS TKDKLNTTAG
101: SLALFGSVVP RDAGVVKRLR DSGAVILGKA SLSEWAHFRS FAIPSGWSAR GLQGKNPYVL TADPCGSSSG SAISVAANLV AVSLGTETDG SILCPSSQNS
201: VVGFKPTVGL TSRGGVVPVS LRQDSVGPIC RTVSDAVILL DAIVGYDPLD EATKTASQFI PKGGYKQFLT ASGLKGKRLG VVMKHSLLDH PIEMLRREGA
301: TVIEDLSIPN MEVIKDWTKS GERTALLAEF KMSLNAYLKD LVKSPVRSLA DVIAYNEKFA EERV
101: SLALFGSVVP RDAGVVKRLR DSGAVILGKA SLSEWAHFRS FAIPSGWSAR GLQGKNPYVL TADPCGSSSG SAISVAANLV AVSLGTETDG SILCPSSQNS
201: VVGFKPTVGL TSRGGVVPVS LRQDSVGPIC RTVSDAVILL DAIVGYDPLD EATKTASQFI PKGGYKQFLT ASGLKGKRLG VVMKHSLLDH PIEMLRREGA
301: TVIEDLSIPN MEVIKDWTKS GERTALLAEF KMSLNAYLKD LVKSPVRSLA DVIAYNEKFA EERV
001: MVALRFFFFS SLLILLILSQ ALIMSVGSAS QIRLSSTFSI QEATIEDIRV AFNEKRLTSK QLVELYLEAI SKLNPILHAV IETNPDALIQ AEIADRERDL
101: KNTTKLPILH GVPVLLKDSI STKDKLNTTA GSFALLGSVV ARDAGVVKRL RESGAVILGK ASLSEWAHFR SFSIPDGWSA RGLQGKNPYV LSANPSGSSS
201: GSAISVTANL VAVSLGTETD GSILSPASQN SVVGIKPSVG LTSRAGVVPI SLRQDSIGPI CRTVSDAVHL LDAIVGYDPL DEATKTASEF IPEGGYKQFL
301: TTSGLKGKRL GIVMKHSSLL DHHIKTLRRE GAIVINNLTI PNIEVIVGGT DSGEEIALLA EFKMSLNAYL KELVKSPVRS LADVIAYNEE FAEQEKVKEW
401: GQEVFLTAEA TSGMGEKEKT ALQKMKELSR NGIEKLIEEN KLDAIVTLGS DLSSVLAIGG YPGINVPAGY DSGGVPYGIS FGGLRFSEPK LIEIAFAFEQ
501: ATLIRKPPKF IA
101: KNTTKLPILH GVPVLLKDSI STKDKLNTTA GSFALLGSVV ARDAGVVKRL RESGAVILGK ASLSEWAHFR SFSIPDGWSA RGLQGKNPYV LSANPSGSSS
201: GSAISVTANL VAVSLGTETD GSILSPASQN SVVGIKPSVG LTSRAGVVPI SLRQDSIGPI CRTVSDAVHL LDAIVGYDPL DEATKTASEF IPEGGYKQFL
301: TTSGLKGKRL GIVMKHSSLL DHHIKTLRRE GAIVINNLTI PNIEVIVGGT DSGEEIALLA EFKMSLNAYL KELVKSPVRS LADVIAYNEE FAEQEKVKEW
401: GQEVFLTAEA TSGMGEKEKT ALQKMKELSR NGIEKLIEEN KLDAIVTLGS DLSSVLAIGG YPGINVPAGY DSGGVPYGIS FGGLRFSEPK LIEIAFAFEQ
501: ATLIRKPPKF IA
Arabidopsis Description
Amidase family protein [Source:TAIR;Acc:AT4G34880]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.