Subcellular Localization
min:
: max
Winner_takes_all: cytosol, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os04t0184500-00 | Rice | cytosol, plastid | 32.52 | 29.61 |
| Os04t0182875-00 | Rice | extracellular | 30.67 | 26.18 |
| Zm00001d004288_P001 | Maize | extracellular | 28.83 | 24.35 |
| Os01t0115200-00 | Rice | mitochondrion, plastid | 15.34 | 16.03 |
| HORVU2Hr1G003810.1 | Barley | extracellular, mitochondrion | 21.47 | 13.62 |
| Bra011569.1-P | Field mustard | cytosol | 26.99 | 12.09 |
| PGSC0003DMT400005106 | Potato | extracellular | 31.29 | 12.03 |
| Bra022128.1-P | Field mustard | endoplasmic reticulum, vacuole | 34.36 | 11.27 |
| HORVU5Hr1G087780.4 | Barley | extracellular, golgi | 34.36 | 11.05 |
| CDX75470 | Canola | plastid | 20.25 | 10.86 |
| Solyc11g071550.1.1 | Tomato | extracellular, nucleus | 33.13 | 10.67 |
| KRH58810 | Soybean | nucleus | 33.74 | 10.62 |
| KRH42701 | Soybean | cytosol | 31.9 | 10.61 |
| AT4G34880.2 | Thale cress | vacuole | 33.13 | 10.55 |
| VIT_03s0038g02040.t01 | Wine grape | extracellular | 33.13 | 10.51 |
| PGSC0003DMT400048145 | Potato | extracellular | 31.9 | 10.3 |
| Solyc01g111220.2.1 | Tomato | extracellular | 31.9 | 10.16 |
| PGSC0003DMT400004112 | Potato | extracellular | 31.9 | 9.56 |
| VIT_03s0038g02030.t01 | Wine grape | mitochondrion | 25.15 | 8.8 |
| VIT_03s0038g02010.t01 | Wine grape | extracellular, vacuole | 25.15 | 8.65 |
| CDY51679 | Canola | endoplasmic reticulum, vacuole | 23.93 | 8.32 |
| CDX69095 | Canola | cytosol | 16.56 | 6.91 |
| GSMUA_Achr2P11220_001 | Banana | endoplasmic reticulum | 27.61 | 6.34 |
| VIT_03s0038g02000.t01 | Wine grape | plasma membrane | 37.42 | 5.95 |
| KRH42704 | Soybean | cytosol | 6.75 | 5.24 |
| CDY28936 | Canola | plastid | 11.66 | 4.82 |
| PGSC0003DMT400004114 | Potato | plastid | 3.68 | 4.08 |
| HORVU2Hr1G003980.8 | Barley | cytosol | 8.59 | 3.64 |
| VIT_03s0038g01990.t01 | Wine grape | nucleus, peroxisome, plastid | 11.66 | 3.18 |
| VIT_03s0038g02020.t01 | Wine grape | mitochondrion | 4.91 | 3.11 |
| HORVU2Hr1G004020.1 | Barley | cytosol, mitochondrion | 0.61 | 1.67 |
| HORVU1Hr1G091420.1 | Barley | cytosol, plastid | 3.68 | 1.46 |
| VIT_03s0038g01970.t01 | Wine grape | cytosol | 1.84 | 1.45 |
| HORVU2Hr1G003990.5 | Barley | cytosol | 3.68 | 1.14 |
| KRH42703 | Soybean | cytosol, extracellular | 0.61 | 1.11 |
| CDX75471 | Canola | cytosol | 1.23 | 1.01 |
| HORVU2Hr1G004030.1 | Barley | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G091390.1 | EnsemblPlantsGene:HORVU1Hr1G091390 | Gene3D:3.90.1300.10 | InterPro:AS_sf | InterPro:Amidase_dom | InterPro:IPR036928 |
| KEGG:00970+6.3.5.7 | PANTHER:PTHR42678 | PANTHER:PTHR42678:SF1 | PFAM:PF01425 | SEG:seg | SUPFAM:SSF75304 |
| UniParc:UPI000B467A6F | UniProt:A0A287GQA4 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chrchr1H:-:548302372..548302861
Molecular Weight (calculated)
16916.4 Da
IEP (calculated)
7.819
GRAVY (calculated)
0.189
Length
163 amino acids
Sequence
(BLAST)
(BLAST)
001: DAVRRDLREI RKPFHCKVNG QSSHIATLHT PPLAMPPPLR HLLPLLLAAA AASRAAAFVL EEATVDSIHR AFAAGELTSR GLVELYLRRI ASLDPALHAV
101: VELDADGALA AADRADAARL EGAALPPLHG IPVLIKDNIA AAGGDGSGRL NTTAGSLALV GSR
101: VELDADGALA AADRADAARL EGAALPPLHG IPVLIKDNIA AAGGDGSGRL NTTAGSLALV GSR
001: MVALRFFFFS SLLILLILSQ ALIMSVGSAS QIRLSSTFSI QEATIEDIRV AFNEKRLTSK QLVELYLEAI SKLNPILHAV IETNPDALIQ AEIADRERDL
101: KNTTKLPILH GVPVLLKDSI STKDKLNTTA GSFALLGSVV ARDAGVVKRL RESGAVILGK ASLSEWAHFR SFSIPDGWSA PSQNSVVGIK PSVGLTSRAG
201: VVPISLRQDS IGPICRTVSD AVHLLDAIVG YDPLDEATKT ASEFIPEGGY KQFLTTSGLK GKRLGIVMKH SSLLDHHIKT LRREGAIVIN NLTIPNIEVI
301: VGGTDSGEEI ALLAEFKMSL NAYLKELVKS PVRSLADVIA YNEEFAEQEK VKEWGQEVFL TAEATSGMGE KEKTALQKMK ELSRNGIEKL IEENKLDAIV
401: TLGSDLSSVL AIGGYPGINV PAGYDSGGVP YGISFGGLRF SEPKLIEIAF AFEQATLIRK PPKFIA
101: KNTTKLPILH GVPVLLKDSI STKDKLNTTA GSFALLGSVV ARDAGVVKRL RESGAVILGK ASLSEWAHFR SFSIPDGWSA PSQNSVVGIK PSVGLTSRAG
201: VVPISLRQDS IGPICRTVSD AVHLLDAIVG YDPLDEATKT ASEFIPEGGY KQFLTTSGLK GKRLGIVMKH SSLLDHHIKT LRREGAIVIN NLTIPNIEVI
301: VGGTDSGEEI ALLAEFKMSL NAYLKELVKS PVRSLADVIA YNEEFAEQEK VKEWGQEVFL TAEATSGMGE KEKTALQKMK ELSRNGIEKL IEENKLDAIV
401: TLGSDLSSVL AIGGYPGINV PAGYDSGGVP YGISFGGLRF SEPKLIEIAF AFEQATLIRK PPKFIA
Arabidopsis Description
Amidase family protein [Source:TAIR;Acc:AT4G34880]
SUBAcon: [vacuole,endoplasmic reticulum]
SUBAcon: [vacuole,endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.