Factsheet for HORVU2Hr1G003980.8

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G004020.1	Barley	cytosol, mitochondrion	10.91	70.0
HORVU2Hr1G004030.1	Barley	cytosol	24.16	63.7
TraesCS2D01G027200.1	Wheat	cytosol	80.0	58.22
HORVU5Hr1G087780.4	Barley	extracellular, golgi	73.77	56.02
VIT_03s0038g01970.t01	Wine grape	cytosol	28.57	53.14
KRH42703	Soybean	cytosol, extracellular	11.69	50.0
HORVU1Hr1G091420.1	Barley	cytosol, plastid	52.47	49.27
CDX75471	Canola	cytosol	23.64	45.96
HORVU2Hr1G003990.5	Barley	cytosol	61.82	45.33
KRH42704	Soybean	cytosol	24.42	44.76
CDY28936	Canola	plastid	44.94	43.91
PGSC0003DMT400004114	Potato	plastid	16.62	43.54
VIT_03s0038g02010.t01	Wine grape	extracellular, vacuole	50.65	41.14
VIT_03s0038g02030.t01	Wine grape	mitochondrion	48.57	40.13
VIT_03s0038g02040.t01	Wine grape	extracellular	51.95	38.91
CDY51679	Canola	endoplasmic reticulum, vacuole	47.01	38.59
KRH42701	Soybean	cytosol	48.31	37.96
PGSC0003DMT400005106	Potato	extracellular	41.56	37.74
CDX69095	Canola	cytosol	38.18	37.6
Solyc01g111220.2.1	Tomato	extracellular	49.61	37.3
KRH58810	Soybean	nucleus	49.61	36.87
Bra022128.1-P	Field mustard	endoplasmic reticulum, vacuole	47.01	36.42
Solyc11g071550.1.1	Tomato	extracellular, nucleus	47.27	35.97
PGSC0003DMT400048145	Potato	extracellular	46.75	35.64
PGSC0003DMT400004112	Potato	extracellular	49.87	35.29
AT4G34880.2	Thale cress	vacuole	45.45	34.18
VIT_03s0038g02020.t01	Wine grape	mitochondrion	22.08	33.07
Bra011569.1-P	Field mustard	cytosol	30.91	32.69
VIT_03s0038g01990.t01	Wine grape	nucleus, peroxisome, plastid	45.19	29.15
GSMUA_Achr2P11220_001	Banana	endoplasmic reticulum	52.73	28.59
HORVU2Hr1G003810.1	Barley	extracellular, mitochondrion	17.14	25.68
CDX75470	Canola	plastid	18.7	23.68
VIT_03s0038g02000.t01	Wine grape	plasma membrane	50.65	19.01
HORVU1Hr1G091390.1	Barley	cytosol, extracellular	3.64	8.59

Protein Annotations

EnsemblPlants:HORVU2Hr1G003980.8	EnsemblPlantsGene:HORVU2Hr1G003980	Gene3D:3.90.1300.10	InterPro:AS_sf	InterPro:Amidase_dom	InterPro:IPR036928
KEGG:00970+6.3.5.7	ncoils:Coil	PANTHER:PTHR42678	PANTHER:PTHR42678:SF3	PFAM:PF01425	SEG:seg
SUPFAM:SSF75304	UniParc:UPI000B471629	UniProt:A0A287GXQ6	MapMan:35.1	:	:

Description

No Description!

Coordinates

chrchr2H:-:9182932..9184852

Molecular Weight (calculated)

37730.4 Da

IEP (calculated)

7.725

GRAVY (calculated)

-0.004

Length

385 amino acids

Sequence
(BLAST)

001: FRKFVDKHLD TFQKIFPANS TTLVRFYLDQ XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX SSAGSGVAAA ANMAAVTLGT DTDGSILCPS SFNSVVGIRP
101: TLGLTSRAGV VPITPLQDTV GWXXXXVSDA VHVLDAIVGY DELDAAATGA ASKFIPPGGY TQFLKKDGLR GKRIGVLRGF FRHAGTQPLR VYEQHLATMR
201: KHGAVVVDNL HVAANPTALL DDISSNEGIA MQAEFKLSIN AYLADLLYSP VRSLADIIAF NNKHPVEERM KDFGQDDLIA AQNTTGIGPV ERVAIRRLKE
301: LSANGLQKLM KERQLDAIVT PSSDASSLLA TGGHPGIVVP AGYDEQGVPF GICFGGLQGY EPRLIEMAYA FERATKVRMP PMFKP

Best Arabidopsis Sequence Match ( AT4G34880.1 )
(BLAST)

001: MVALRFFFFS SLLILLILSQ ALIMSVGSAS QIRLSSTFSI QEATIEDIRV AFNEKRLTSK QLVELYLEAI SKLNPILHAV IETNPDALIQ AEIADRERDL
101: KNTTKLPILH GVPVLLKDSI STKDKLNTTA GSFALLGSVV ARDAGVVKRL RESGAVILGK ASLSEWAHFR SFSIPDGWSA PSQNSVVGIK PSVGLTSRAG
201: VVPISLRQDS IGPICRTVSD AVHLLDAIVG YDPLDEATKT ASEFIPEGGY KQFLTTSGLK GKRLGIVMKH SSLLDHHIKT LRREGAIVIN NLTIPNIEVI
301: VGGTDSGEEI ALLAEFKMSL NAYLKELVKS PVRSLADVIA YNEEFAEQEK VKEWGQEVFL TAEATSGMGE KEKTALQKMK ELSRNGIEKL IEENKLDAIV
401: TLGSDLSSVL AIGGYPGINV PAGYDSGGVP YGISFGGLRF SEPKLIEIAF AFEQATLIRK PPKFIA

Arabidopsis Description

Amidase family protein [Source:TAIR;Acc:AT4G34880]
SUBAcon: [vacuole,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.