Factsheet for HORVU5Hr1G087780.4

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

plasma membrane 5
extracellular 6
endoplasmic reticulum 5
vacuole 5
golgi 6
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G364700.2	Wheat	extracellular, vacuole	88.36	88.71
TraesCS2A01G064000.1	Wheat	extracellular, vacuole	87.97	87.97
TraesCS2B01G035200.1	Wheat	cytosol	85.01	87.96
TraesCS2D01G026300.1	Wheat	cytosol	87.18	87.7
TraesCS2D01G062200.1	Wheat	cytosol	52.07	84.62
HORVU2Hr1G003980.8	Barley	cytosol	56.02	73.77
HORVU2Hr1G004020.1	Barley	cytosol, mitochondrion	8.28	70.0
HORVU2Hr1G004030.1	Barley	cytosol	18.54	64.38
HORVU2Hr1G003810.1	Barley	extracellular, mitochondrion	32.35	63.81
CDY28936	Canola	plastid	47.93	61.68
PGSC0003DMT400004114	Potato	plastid	17.36	59.86
VIT_03s0038g02030.t01	Wine grape	mitochondrion	54.24	59.01
VIT_03s0038g02040.t01	Wine grape	extracellular	59.37	58.56
Bra011569.1-P	Field mustard	cytosol	41.62	57.97
CDY51679	Canola	endoplasmic reticulum, vacuole	53.06	57.36
Bra022128.1-P	Field mustard	endoplasmic reticulum, vacuole	55.62	56.74
VIT_03s0038g02010.t01	Wine grape	extracellular, vacuole	52.47	56.12
KRH42701	Soybean	cytosol	53.45	55.31
Solyc01g111220.2.1	Tomato	extracellular	55.62	55.08
PGSC0003DMT400005106	Potato	extracellular	45.56	54.48
CDX69095	Canola	cytosol	41.81	54.22
Solyc11g071550.1.1	Tomato	extracellular, nucleus	53.85	53.95
HORVU1Hr1G091420.1	Barley	cytosol, plastid	43.39	53.66
KRH58810	Soybean	nucleus	54.24	53.09
PGSC0003DMT400048145	Potato	extracellular	52.86	53.07
AT4G34880.2	Thale cress	vacuole	53.45	52.93
PGSC0003DMT400004112	Potato	extracellular	55.62	51.84
VIT_03s0038g01970.t01	Wine grape	cytosol	20.51	50.24
KRH42703	Soybean	cytosol, extracellular	8.88	50.0
KRH42704	Soybean	cytosol	20.32	49.05
CDX75470	Canola	plastid	28.99	48.36
CDX75471	Canola	cytosol	18.34	46.97
VIT_03s0038g02020.t01	Wine grape	mitochondrion	22.29	43.97
HORVU2Hr1G003990.5	Barley	cytosol	44.77	43.24
GSMUA_Achr2P11220_001	Banana	endoplasmic reticulum	56.8	40.56
VIT_03s0038g01990.t01	Wine grape	nucleus, peroxisome, plastid	43.79	37.19
HORVU1Hr1G091390.1	Barley	cytosol, extracellular	11.05	34.36
VIT_03s0038g02000.t01	Wine grape	plasma membrane	57.0	28.17

Protein Annotations

EnsemblPlants:HORVU5Hr1G087780.4	EnsemblPlantsGene:HORVU5Hr1G087780	Gene3D:3.90.1300.10	InterPro:AS_sf	InterPro:Amidase_dom	InterPro:IPR036928
KEGG:00970+6.3.5.7	PANTHER:PTHR42678	PANTHER:PTHR42678:SF3	PFAM:PF01425	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF75304	UniParc:UPI0002954433	UniProt:M0ZA40	MapMan:35.1	:	:

Description

No Description!

Coordinates

chrchr5H:-:579459063..579461301

Molecular Weight (calculated)

53417.4 Da

IEP (calculated)

8.564

GRAVY (calculated)

0.100

Length

507 amino acids

Sequence
(BLAST)

001: MAWLRLKAVA AVLALLAVAA GVAHGFEFHE ATVDAIQLGF SNGTLTSRAL VRFYLDQIGR LNPLLHAVIE VNPDALRQAK RADAELRSSG HATGSLHGVP
101: VLLKDNIATR DALNTTAGSL ALLGSVVRRD AGVVARLRRA GAVVLGKASL SEWANFRQVD AGWSARGGQA RNPYVLSSTP CGSSAGSGVA AAANMAAVTL
201: GTETDGSILC PSSFNSVVGI KPTLGLTSRA GVIPITPLQD TVGPMCRTVS DAVHVLDAIV GYDEHDAAAT GAASKYIPRG GYTQFLKKDG LKGKKIGVPN
301: GFFQGYGQAQ LNVYKQHLAT MRKLGAVVVE KLDVAANLTA LLVEIGSNEG IAMQSEFKLS INAYLADLVH SPVHSLADII AFNNKHPVEE RLKDFGQPDL
401: IAAQNTNGIG PVEKDAIRRL KELNTNGLEK LMKELALDAI VAPNYDASSL LAIGGTPGIV VPAGYDEQGV PFGICFGGLQ GYEPRLIEMA YAFEQATNVR
501: RPPMFKP

Best Arabidopsis Sequence Match ( AT4G34880.2 )
(BLAST)

001: MVALRFFFFS SLLILLILSQ ALIMSVGSAS QIRLSSTFSI QEATIEDIRV AFNEKRLTSK QLVELYLEAI SKLNPILHAV IETNPDALIQ AEIADRERDL
101: KNTTKLPILH GVPVLLKDSI STKDKLNTTA GSFALLGSVV ARDAGVVKRL RESGAVILGK ASLSEWAHFR SFSIPDGWSA RGLQGKNPYV LSANPSGSSS
201: GSAISVTANL VAVSLGTETD GSILSPASQN SVVGIKPSVG LTSRAGVVPI SLRQDSIGPI CRTVSDAVHL LDAIVGYDPL DEATKTASEF IPEGGYKQFL
301: TTSGLKGKRL GIVMKHSSLL DHHIKTLRRE GAIVINNLTI PNIEVIVGGT DSGEEIALLA EFKMSLNAYL KELVKSPVRS LADVIAYNEE FAEQEKVKEW
401: GQEVFLTAEA TSGMGEKEKT ALQKMKELSR NGIEKLIEEN KLDAIVTLGS DLSSVLAIGG YPGINVPAGY DSGGVPYGIS FGGLRFSEPK LIEIAFAFEQ
501: ATLIRKPPKF IA

Arabidopsis Description

Amidase family protein [Source:TAIR;Acc:AT4G34880]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.