Factsheet for TraesCS2D01G026300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plasma membrane 3
extracellular 3
endoplasmic reticulum 3
vacuole 3
golgi 3
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G035200.1	Wheat	cytosol	91.07	93.67
TraesCS3D01G364700.2	Wheat	extracellular, vacuole	89.29	89.11
HORVU5Hr1G087780.4	Barley	extracellular, golgi	87.7	87.18
TraesCS2D01G062200.1	Wheat	cytosol	51.79	83.65
TraesCS2D01G026900.1	Wheat	extracellular, golgi	79.56	80.04
TraesCS2D01G027200.1	Wheat	cytosol	81.15	77.32
Os04t0183500-01	Rice	extracellular, plasma membrane	71.63	71.77
Os04t0184100-01	Rice	extracellular	70.24	70.24
Os04t0182875-00	Rice	extracellular	25.2	66.49
TraesCS2D01G027000.1	Wheat	golgi, plasma membrane, vacuole	66.47	65.82
Os04t0184500-00	Rice	cytosol, plastid	23.21	65.36
Zm00001d004288_P001	Maize	extracellular	24.8	64.77
CDY28936	Canola	plastid	47.22	60.41
Bra011569.1-P	Field mustard	cytosol	42.06	58.24
PGSC0003DMT400004114	Potato	plastid	16.87	57.82
VIT_03s0038g02030.t01	Wine grape	mitochondrion	52.98	57.3
VIT_03s0038g02040.t01	Wine grape	extracellular	58.33	57.2
Bra022128.1-P	Field mustard	endoplasmic reticulum, vacuole	54.56	55.33
CDY51679	Canola	endoplasmic reticulum, vacuole	51.39	55.22
KRH42701	Soybean	cytosol	53.57	55.1
TraesCS1D01G425500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	56.35	54.93
VIT_03s0038g02010.t01	Wine grape	extracellular, vacuole	51.19	54.43
CDX69095	Canola	cytosol	42.06	54.22
Solyc01g111220.2.1	Tomato	extracellular	54.76	53.91
PGSC0003DMT400005106	Potato	extracellular	44.44	52.83
KRH58810	Soybean	nucleus	54.17	52.7
Solyc11g071550.1.1	Tomato	extracellular, nucleus	52.58	52.37
PGSC0003DMT400048145	Potato	extracellular	51.79	51.68
AT4G34880.2	Thale cress	vacuole	52.18	51.37
PGSC0003DMT400004112	Potato	extracellular	54.76	50.74
KRH42703	Soybean	cytosol, extracellular	8.93	50.0
VIT_03s0038g01970.t01	Wine grape	cytosol	20.24	49.28
KRH42704	Soybean	cytosol	20.24	48.57
CDX75471	Canola	cytosol	18.65	47.47
CDX75470	Canola	plastid	28.57	47.37
VIT_03s0038g02020.t01	Wine grape	mitochondrion	21.83	42.8
GSMUA_Achr2P11220_001	Banana	endoplasmic reticulum	56.55	40.14
Os01t0115200-00	Rice	mitochondrion, plastid	12.1	39.1
VIT_03s0038g01990.t01	Wine grape	nucleus, peroxisome, plastid	43.65	36.85
VIT_03s0038g02000.t01	Wine grape	plasma membrane	56.15	27.58

Protein Annotations

EnsemblPlants:TraesCS2D01G026300.1	EnsemblPlantsGene:TraesCS2D01G026300	Gene3D:3.90.1300.10	InterPro:AS_sf	InterPro:Amidase_dom	InterPro:IPR036928
KEGG:00970+6.3.5.7	PANTHER:PTHR42678	PANTHER:PTHR42678:SF3	PFAM:PF01425	SEG:seg	SUPFAM:SSF75304
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr2D:-:11167498..11169390

Molecular Weight (calculated)

52902.5 Da

IEP (calculated)

6.997

GRAVY (calculated)

0.070

Length

504 amino acids

Sequence
(BLAST)

001: MASQELQAVA AVQALVAGAG AAHGFEFHEA TVDAIQLGFS NGTLTSTALV QFYLDQIGRL NPLLHAVIEV NPDALPQAKL ADAERHGGTA TGALHGVPIL
101: LKDNIATRDA LSTTAGSLAL LGSVVKRNAG VVARLRHAGA VVLGKASLSE WANFRPVDNG WSARGGQARN PYVLSSTPCG SSAGSGVAAA ANMAAVTLGT
201: ETDGSILCPS SFNSVVGIKP TLGLTSRAGV VPITPLQDTV GPMCRTVSDA VHVLDTIVGY DEHDAAATGA ASKYIPGGFA QFLKKDGPRG KRIGVPNGFF
301: QRYGQTQLRV YKQHLATMRE LGAVVIEKLD VAANLSALLD EIGSNEAIAM QAEFKLSINA YLADLVHSPV HSLADIIAFN NKHPVEERLK DFGQPDLIAA
401: QNTNGIGPRE RAAICRLKEL NAEGLENLMK ERQLDAIVAP NSVVSSLLAI GGHPGIVVPA GYDEKGVPFG ICFGGLQGYE PRLIEMAYAF EQATKVRRQP
501: MFKP

Best Arabidopsis Sequence Match ( AT4G34880.1 )
(BLAST)

001: MVALRFFFFS SLLILLILSQ ALIMSVGSAS QIRLSSTFSI QEATIEDIRV AFNEKRLTSK QLVELYLEAI SKLNPILHAV IETNPDALIQ AEIADRERDL
101: KNTTKLPILH GVPVLLKDSI STKDKLNTTA GSFALLGSVV ARDAGVVKRL RESGAVILGK ASLSEWAHFR SFSIPDGWSA PSQNSVVGIK PSVGLTSRAG
201: VVPISLRQDS IGPICRTVSD AVHLLDAIVG YDPLDEATKT ASEFIPEGGY KQFLTTSGLK GKRLGIVMKH SSLLDHHIKT LRREGAIVIN NLTIPNIEVI
301: VGGTDSGEEI ALLAEFKMSL NAYLKELVKS PVRSLADVIA YNEEFAEQEK VKEWGQEVFL TAEATSGMGE KEKTALQKMK ELSRNGIEKL IEENKLDAIV
401: TLGSDLSSVL AIGGYPGINV PAGYDSGGVP YGISFGGLRF SEPKLIEIAF AFEQATLIRK PPKFIA

Arabidopsis Description

Amidase family protein [Source:TAIR;Acc:AT4G34880]
SUBAcon: [vacuole,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.